BLASTX nr result

ID: Cimicifuga21_contig00012383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012383
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]       65   7e-09
ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [...    62   5e-08

>ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|222852215|gb|EEE89762.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = +2

Query: 35  SEMSKRP---VNGSIDGRKRKQREEDDQEK----ATEAEVEEFFAIIRRLHTAARYFKK- 190
           SE  KR    +N  +   ++K +E++  ++    AT AEV+EFFAI+ R+H A +YFK+ 
Sbjct: 2   SEAKKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDEFFAILERIHVAVKYFKEA 61

Query: 191 NGNDRKLTE---KEWRFEXXXXXXXXXXXKREEIVEENVLLDLNSDPRPD 331
           N + R L E    E   E           K+EE VEENV  DLN+DP P+
Sbjct: 62  NEDGRNLAEVRSLESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111


>gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 115

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
 Frame = +2

Query: 35  SEMSKRP---VNGSIDGRKRKQREEDDQEK----ATEAEVEEFFAIIRRLHTAARYFKKN 193
           SE  KR    +N  +   ++K +E++  ++    AT AEV+EFFAI+ R+H A +YF++ 
Sbjct: 2   SEAKKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDEFFAILERIHVAVKYFEEA 61

Query: 194 GNDRK----LTEKEWRFEXXXXXXXXXXXKREEIVEENVLLDLNSDPRPD 331
             DR+    +   E   E           K+EE VEENV  DLN+DP P+
Sbjct: 62  HEDRRNLAEVRSLESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111


>ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [Vitis vinifera]
          Length = 103

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
 Frame = +2

Query: 68  IDGRKRKQREEDD-----QEKATEAEVEEFFAIIRRLHTAARYFKKNGNDRKLTEKEWR- 229
           ++  KRKQ E+ +     +++ TE EVEEFFAI+RR+H A +YF +N N   +  K W+ 
Sbjct: 1   MESGKRKQPEDGNINVTTEKEVTEEEVEEFFAILRRIHVAVKYF-ENSNGPGMAAKRWKP 59

Query: 230 ------FEXXXXXXXXXXXKREEIVEENVLLDLNSDPRPD 331
                 F+           K+EE VEEN  LDLN  P  +
Sbjct: 60  SFEREDFQVEANDVKIGKKKKEEGVEENKGLDLNVGPETE 99


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