BLASTX nr result

ID: Cimicifuga21_contig00012382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012382
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]       65   4e-09
ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [...    63   3e-08
ref|XP_003555899.1| PREDICTED: uncharacterized protein LOC100815...    59   3e-07
ref|XP_002531636.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002312395.1| predicted protein [Populus trichocarpa] gi|222852215|gb|EEE89762.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
 Frame = +3

Query: 6   SEMSKRA---VNDAIDGRKRKQREEDDHEK----VTEAEVEEFFAIIRRLHTAARYFKK- 161
           SE  KR    +ND +   ++K +E++  ++     T AEV+EFFAI+ R+H A +YFK+ 
Sbjct: 2   SEAKKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDEFFAILERIHVAVKYFKEA 61

Query: 162 NGNDRKLTE---KEWRFEXXXXXXXXXXXKREEIVEENVLLDLNSDPRPD 302
           N + R L E    E   E           K+EE VEENV  DLN+DP P+
Sbjct: 62  NEDGRNLAEVRSLESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111


>gb|ABK96493.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 115

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 11/110 (10%)
 Frame = +3

Query: 6   SEMSKRA---VNDAIDGRKRKQREEDDHEK----VTEAEVEEFFAIIRRLHTAARYFKKN 164
           SE  KR    +ND +   ++K +E++  ++     T AEV+EFFAI+ R+H A +YF++ 
Sbjct: 2   SEAKKRKQGELNDKVPDAQKKAQEDNGGQRQTAEATNAEVDEFFAILERIHVAVKYFEEA 61

Query: 165 GNDRK----LTEKEWRFEXXXXXXXXXXXKREEIVEENVLLDLNSDPRPD 302
             DR+    +   E   E           K+EE VEENV  DLN+DP P+
Sbjct: 62  HEDRRNLAEVRSLESGLEVEGSGMKVSDIKKEEGVEENVGFDLNADPEPE 111


>ref|XP_003631223.1| PREDICTED: protein NIM1-INTERACTING 2-like [Vitis vinifera]
          Length = 103

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 12/100 (12%)
 Frame = +3

Query: 39  IDGRKRKQREEDD-----HEKVTEAEVEEFFAIIRRLHTAARYFKKNGNDRKLTEKEWR- 200
           ++  KRKQ E+ +      ++VTE EVEEFFAI+RR+H A +YF +N N   +  K W+ 
Sbjct: 1   MESGKRKQPEDGNINVTTEKEVTEEEVEEFFAILRRIHVAVKYF-ENSNGPGMAAKRWKP 59

Query: 201 ------FEXXXXXXXXXXXKREEIVEENVLLDLNSDPRPD 302
                 F+           K+EE VEEN  LDLN  P  +
Sbjct: 60  SFEREDFQVEANDVKIGKKKKEEGVEENKGLDLNVGPETE 99


>ref|XP_003555899.1| PREDICTED: uncharacterized protein LOC100815940 [Glycine max]
          Length = 100

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/93 (35%), Positives = 56/93 (60%)
 Frame = +3

Query: 18  KRAVNDAIDGRKRKQREEDDHEKVTEAEVEEFFAIIRRLHTAARYFKKNGNDRKLTEKEW 197
           K+  +DA+ G +++++  +D E VT+ EVEEF AI+RR++TA +YFK +G D    EK+ 
Sbjct: 9   KQGEDDAVSGSQQQKKARED-EAVTDEEVEEFCAILRRINTAVKYFKSHGEDVAALEKDI 67

Query: 198 RFEXXXXXXXXXXXKREEIVEENVLLDLNSDPR 296
             +           ++E   E+++ LDLN  P+
Sbjct: 68  MQDVKEATRMSNQNEKE---EDDLSLDLNVTPQ 97


>ref|XP_002531636.1| conserved hypothetical protein [Ricinus communis]
           gi|223528754|gb|EEF30764.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 108

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/99 (38%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
 Frame = +3

Query: 51  KRKQREEDDHE----KVTEAEVEEFFAIIRRLHTAARYFKKNGN-DRKLTEKEWR---FE 206
           ++++RE D  E     V + EVEEFF I+RR+H A +YF+ N N   K   K W+   FE
Sbjct: 4   EKRKRETDGKEVVGAPVDDDEVEEFFTILRRIHVAVKYFENNNNRSSKNNCKRWKTRSFE 63

Query: 207 --------XXXXXXXXXXXKREEIVEENVLLDLNSDPRP 299
                              K E  V EN  LDLNSDP P
Sbjct: 64  KEVIEDVNSGRVELRWRKEKEESFVGENTGLDLNSDPPP 102


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