BLASTX nr result
ID: Cimicifuga21_contig00012379
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012379
(1413 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI31232.3| unnamed protein product [Vitis vinifera] 171 4e-40
ref|XP_002337003.1| predicted protein [Populus trichocarpa] gi|2... 158 4e-36
ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding prote... 157 6e-36
ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222... 157 6e-36
ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|2... 155 2e-35
>emb|CBI31232.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 171 bits (433), Expect = 4e-40
Identities = 103/237 (43%), Positives = 151/237 (63%), Gaps = 1/237 (0%)
Frame = -1
Query: 1413 KDDQEFEGSTSASTLSRNIPSAKGTVLGTDKETSKSSPCLGNALGFKDDQVFEDAKYLYK 1234
+DD++ + S+SAS + N+P+ KGT+ +ET ++ E ++LYK
Sbjct: 117 RDDKKLD-SSSASNIVNNVPATKGTLQVQIQETCQTP---------------EGMQHLYK 160
Query: 1233 SKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREAENDAAKV 1054
++LQ AQKR+L P+YS G H RFK+ VT+E QT+E F TL++AE+ AAK+
Sbjct: 161 TQLQTYAQKRNLPLPMYSFESIGPSHNCRFKSKVTIEEQTYESPDFFPTLKDAEHAAAKL 220
Query: 1053 ALCSLSTET-QEDDCVIYKNLLHNLIQKEGFSIPVYTTTKAGVSHLPTFTSSVKVKGDVF 877
AL SLS QEDD +YKNLL + +KEG+ +PVY+T K+GVSH+PTF S+V+++G+ F
Sbjct: 221 ALMSLSPAGFQEDDYGVYKNLLQEMARKEGYQLPVYSTEKSGVSHMPTFLSTVEIEGETF 280
Query: 876 HGLGAKTKRQAEFSAAKVAYLSLKEDSSSASTVSRNIPSGKGKVLGTDEETSKSSSS 706
G AKTK+ AE +AAK AY LKE S+ + S + PSG+ ++ G + + S SS
Sbjct: 281 VGQKAKTKKLAEMNAAKAAYTHLKERRSNLNHKSLS-PSGQ-ELRGVESSSFNSESS 335
Score = 99.0 bits (245), Expect = 3e-18
Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 32/331 (9%)
Frame = -1
Query: 1236 KSKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREAENDAAK 1057
K++LQ ++ + P YS ++G PH P F A V+V G +F R+ +EA+++AA
Sbjct: 3 KTRLQELCHRKRWNPPEYSTRKDGPPHNPTFIATVSVGGLSFSTDHPARSSKEAQSNAAG 62
Query: 1056 VALCSLSTETQEDDCVIYKNLLHNLIQKEGFSIPVYTTTKAGVSHLPTFTSSVKVKGDVF 877
+A+ L T+ + +++ + V ++P KG
Sbjct: 63 LAIQYL-TDPKPPPLADSSSVITD------------------VKNIPA------TKGTSQ 97
Query: 876 HGLGAKTKRQAEFSAAKVAYLSLKEDSSSASTVSRNIPSGKGKVLGTDEETSKSSSSLGN 697
+ A ++ A V K DSSSAS + N+P+ KG + +ET ++ + +
Sbjct: 98 PEIQATSQSHQAHEAFLVTRDDKKLDSSSASNIVNNVPATKGTLQVQIQETCQTPEGMQH 157
Query: 696 -----------------------ALGVKKDQEFEAVITVDGQVYE------TLRGAENVA 604
++G + F++ +T++ Q YE TL+ AE+ A
Sbjct: 158 LYKTQLQTYAQKRNLPLPMYSFESIGPSHNCRFKSKVTIEEQTYESPDFFPTLKDAEHAA 217
Query: 603 AKVALCSLSTDTREAITLSLMDSDLCPSFLQGDRVIDKNLFQDSTPKEGLSIPVYKTTKS 424
AK+AL SLS F + D + KNL Q+ KEG +PVY T KS
Sbjct: 218 AKLALMSLSP----------------AGFQEDDYGVYKNLLQEMARKEGYQLPVYSTEKS 261
Query: 423 GASHLPI---SGEAKGDVSHELAAKTKKQAE 340
G SH+P + E +G+ AKTKK AE
Sbjct: 262 GVSHMPTFLSTVEIEGETFVGQKAKTKKLAE 292
>ref|XP_002337003.1| predicted protein [Populus trichocarpa] gi|222837556|gb|EEE75921.1|
predicted protein [Populus trichocarpa]
Length = 330
Score = 158 bits (399), Expect = 4e-36
Identities = 80/155 (51%), Positives = 109/155 (70%)
Frame = -1
Query: 1248 KYLYKSKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREAEN 1069
++L+K++LQ AQKR+ + PVYSC R G PH RFK VTV GQT+E ++ TL +AE
Sbjct: 2 QHLFKNQLQTYAQKRNFTLPVYSCERVGPPHASRFKCKVTVNGQTYESQEYFPTLNKAEL 61
Query: 1068 DAAKVALCSLSTETQEDDCVIYKNLLHNLIQKEGFSIPVYTTTKAGVSHLPTFTSSVKVK 889
AAK AL SL + E+D YK+LL L Q+EG +P Y T K+G +H+PTF S V+++
Sbjct: 62 AAAKAALMSLLSNGVEEDGFGYKSLLQELAQREGCGLPTYWTDKSGEAHVPTFVSKVEIE 121
Query: 888 GDVFHGLGAKTKRQAEFSAAKVAYLSLKEDSSSAS 784
G++F G GAKTK+QAE SAAK+AY +L++ SS S
Sbjct: 122 GEIFTGQGAKTKKQAEMSAAKIAYTALQQRYSSQS 156
>ref|XP_004170549.1| PREDICTED: double-stranded RNA-binding protein 4-like [Cucumis
sativus]
Length = 247
Score = 157 bits (397), Expect = 6e-36
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Frame = -1
Query: 1248 KYLYKSKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREAEN 1069
++LYK+KLQN +QKR L+ P+Y+C R+G PH RF+ V ++G+T+E +F TL++AEN
Sbjct: 2 QHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAEN 61
Query: 1068 DAAKVALCSLSTE-TQED-DCVIYKNLLHNLIQKEGFSIPVYTTTKAGVSHLPTFTSSVK 895
AKVAL SL + QED D +YKNLL + QK G +P Y+T+++G H+P F S+VK
Sbjct: 62 AVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVK 121
Query: 894 VKGDVFHGLGAKTKRQAEFSAAKVAYLSLKEDSSSASTVSR 772
V + F G ++TK+QAE SAAKVAY ++KE S S ST R
Sbjct: 122 VGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR 162
Score = 58.9 bits (141), Expect = 3e-06
Identities = 42/119 (35%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Frame = -1
Query: 669 FEAVITVDGQVYE------TLRGAENVAAKVALCSLSTDTREAITLSLMDSDLCPSFLQG 508
F + +DG+ YE TL+ AEN AKVAL SL D +
Sbjct: 36 FRCKVEIDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQE---------------DS 80
Query: 507 DRVIDKNLFQDSTPKEGLSIPVYKTTKSGASHLP--ISGEAKGDVSHE-LAAKTKKQAE 340
D + KNL Q+ K GL +P Y T++SG H+P +S G+ + E ++TKKQAE
Sbjct: 81 DSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAE 139
>ref|XP_004141127.1| PREDICTED: uncharacterized protein LOC101222879 [Cucumis sativus]
Length = 446
Score = 157 bits (397), Expect = 6e-36
Identities = 81/161 (50%), Positives = 113/161 (70%), Gaps = 2/161 (1%)
Frame = -1
Query: 1248 KYLYKSKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREAEN 1069
++LYK+KLQN +QKR L+ P+Y+C R+G PH RF+ V ++G+T+E +F TL++AEN
Sbjct: 201 QHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVEIDGKTYESLEFHGTLKDAEN 260
Query: 1068 DAAKVALCSLSTE-TQED-DCVIYKNLLHNLIQKEGFSIPVYTTTKAGVSHLPTFTSSVK 895
AKVAL SL + QED D +YKNLL + QK G +P Y+T+++G H+P F S+VK
Sbjct: 261 AVAKVALMSLCQDGAQEDSDSGLYKNLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVK 320
Query: 894 VKGDVFHGLGAKTKRQAEFSAAKVAYLSLKEDSSSASTVSR 772
V + F G ++TK+QAE SAAKVAY ++KE S S ST R
Sbjct: 321 VGEENFEGKPSRTKKQAEMSAAKVAYFTIKEGSQSISTRKR 361
Score = 88.6 bits (218), Expect = 4e-15
Identities = 90/353 (25%), Positives = 147/353 (41%), Gaps = 52/353 (14%)
Frame = -1
Query: 1242 LYKSKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREAENDA 1063
++K+KLQ ++S P YS +++G H PRF+A VTV+G+ F ++ ++A+NDA
Sbjct: 1 MFKTKLQELCHRKSYKLPEYSVVKQGQDHDPRFEATVTVDGKQFCSPTPSKSSKQAQNDA 60
Query: 1062 AKVAL--CSLSTETQEDDCVIYKNLLHNLIQKEGF--SIPVYTTT--------KAGVSHL 919
AK+A SL + Q + + + LL SIP + + + S L
Sbjct: 61 AKLAFDFFSLPSLPQPPEQLCPQPLLPQSSSPPKLIPSIPPFPPSLNLSSFPQPSLTSQL 120
Query: 918 PTFTSSVKVKGDVFHGLGAKTKRQAEFSAAKVAYLSLKEDSSSASTVSRNIPSGKGKVLG 739
F + + V + K + + ++++ S S V S + ++
Sbjct: 121 GNFGAITNLDNKVTSPPRPEVKHEVSYKSSELKESSKDSPIMSNMDVKFTAQSVEPRIQN 180
Query: 738 TD-----EETSKSSSSLGNALGVKKDQ--------------------------EFEAVIT 652
T+ E+ K L + K++ F +
Sbjct: 181 TNKSPVVEDFDKECLKLTGMQHLYKNKLQNFSQKRGLTLPMYTCERDGPPHASRFRCKVE 240
Query: 651 VDGQVYE------TLRGAENVAAKVALCSLSTDTREAITLSLMDSDLCPSFLQGDRVIDK 490
+DG+ YE TL+ AEN AKVAL SL D + D + K
Sbjct: 241 IDGKTYESLEFHGTLKDAENAVAKVALMSLCQDGAQE---------------DSDSGLYK 285
Query: 489 NLFQDSTPKEGLSIPVYKTTKSGASHLP--ISGEAKGDVSHE-LAAKTKKQAE 340
NL Q+ K GL +P Y T++SG H+P +S G+ + E ++TKKQAE
Sbjct: 286 NLLQEMAQKGGLGLPAYSTSQSGEVHVPVFVSTVKVGEENFEGKPSRTKKQAE 338
>ref|XP_002319709.1| predicted protein [Populus trichocarpa] gi|222858085|gb|EEE95632.1|
predicted protein [Populus trichocarpa]
Length = 240
Score = 155 bits (393), Expect = 2e-35
Identities = 81/157 (51%), Positives = 107/157 (68%), Gaps = 6/157 (3%)
Frame = -1
Query: 1254 DAKYLYKSKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREA 1075
D + L+KS+LQ AQKR+ + PVYSC R G PH RFK VTV GQTFE ++ TL +A
Sbjct: 83 DMQRLFKSQLQTYAQKRNFALPVYSCERVGPPHSSRFKCKVTVNGQTFESLEYFSTLNKA 142
Query: 1074 ENDAAKVALCSLSTETQEDDCVI------YKNLLHNLIQKEGFSIPVYTTTKAGVSHLPT 913
E+ AAK AL SL E+ + YKNLL L Q+EG +P Y+T K+G +H+PT
Sbjct: 143 EHAAAKAALMSLLPNGVEEVSFLFMDESGYKNLLQELAQREGCGLPTYSTNKSGEAHVPT 202
Query: 912 FTSSVKVKGDVFHGLGAKTKRQAEFSAAKVAYLSLKE 802
F S+V+++G++F G GAKTK+QAE SAAK AY +LK+
Sbjct: 203 FISTVEIEGEIFTGQGAKTKKQAEMSAAKTAYTALKQ 239
Score = 96.3 bits (238), Expect = 2e-17
Identities = 75/237 (31%), Positives = 115/237 (48%), Gaps = 14/237 (5%)
Frame = -1
Query: 1008 IYKNLLHNLIQKEGFSIPVYTTTKAGVSHLPTFTSSVKVKGDVFHGLG-AKTKRQAEFSA 832
+YK+ L L Q+ + +P Y +++ G +H P F ++V V FH + T ++A+ A
Sbjct: 1 MYKSKLQELCQQRAWELPTYESSRQGQAHNPRFLATVTVNNISFHSPSPSNTSKKAQNDA 60
Query: 831 AKVAY--LSLKEDSSSASTVSRNIPSGKGKVLGTDEETSKSSSSLGNA--LGVKKDQEFE 664
AK+AY S+ S S S ++ L T + + + + +G F+
Sbjct: 61 AKLAYEHFSISRPSPSPSPPVSDMQRLFKSQLQTYAQKRNFALPVYSCERVGPPHSSRFK 120
Query: 663 AVITVDGQVYE------TLRGAENVAAKVALCSLSTDTREAITLSLMDSDLCPSFLQGDR 502
+TV+GQ +E TL AE+ AAK AL SL + E + SFL D
Sbjct: 121 CKVTVNGQTFESLEYFSTLNKAEHAAAKAALMSLLPNGVEEV-----------SFLFMDE 169
Query: 501 VIDKNLFQDSTPKEGLSIPVYKTTKSGASHLPI---SGEAKGDVSHELAAKTKKQAE 340
KNL Q+ +EG +P Y T KSG +H+P + E +G++ AKTKKQAE
Sbjct: 170 SGYKNLLQELAQREGCGLPTYSTNKSGEAHVPTFISTVEIEGEIFTGQGAKTKKQAE 226
Score = 91.7 bits (226), Expect = 4e-16
Identities = 72/237 (30%), Positives = 106/237 (44%), Gaps = 16/237 (6%)
Frame = -1
Query: 1242 LYKSKLQNCAQKRSLSSPVYSCIREGSPHIPRFKAMVTVEGQTFEGTKFCRTLREAENDA 1063
+YKSKLQ Q+R+ P Y R+G H PRF A VTV +F T ++A+NDA
Sbjct: 1 MYKSKLQELCQQRAWELPTYESSRQGQAHNPRFLATVTVNNISFHSPSPSNTSKKAQNDA 60
Query: 1062 AKVALCSLS--------TETQEDDCVIYKNLLHNLIQKEGFSIPVYTTTKAGVSHLPTFT 907
AK+A S + D ++K+ L QK F++PVY+ + G H F
Sbjct: 61 AKLAYEHFSISRPSPSPSPPVSDMQRLFKSQLQTYAQKRNFALPVYSCERVGPPHSSRFK 120
Query: 906 SSVKVKGDVFHGLG-AKTKRQAEFSAAKVAYLSLKEDSSSASTVSRNIPSGKGKVLG--T 736
V V G F L T +AE +AAK A +SL + + SG +L
Sbjct: 121 CKVTVNGQTFESLEYFSTLNKAEHAAAKAALMSLLPNGVEEVSFLFMDESGYKNLLQELA 180
Query: 735 DEETSKSSSSLGNALGVKKDQEFEAVITVDGQVY-----ETLRGAENVAAKVALCSL 580
E + N G F + + ++G+++ +T + AE AAK A +L
Sbjct: 181 QREGCGLPTYSTNKSGEAHVPTFISTVEIEGEIFTGQGAKTKKQAEMSAAKTAYTAL 237