BLASTX nr result

ID: Cimicifuga21_contig00012359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012359
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative ...   304   3e-80
ref|XP_002885355.1| ubiquitin-conjugating enzyme 19 [Arabidopsis...   303   6e-80
ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   301   2e-79
ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 1...   299   8e-79
ref|NP_564572.1| ubiquitin-conjugating enzyme E2 20 [Arabidopsis...   299   8e-79

>ref|XP_002513536.1| ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis]
           gi|223547444|gb|EEF48939.1| ubiquitin-conjugating enzyme
           E2 C, putative [Ricinus communis]
          Length = 179

 Score =  304 bits (778), Expect = 3e-80
 Identities = 149/178 (83%), Positives = 156/178 (87%)
 Frame = +2

Query: 230 MPTTQGYQVNTPASMVPNIPTSKQPTPVAKSVDSQSVLKRLQSELMALMMSGDPGISAFP 409
           M T  GYQ NTP +       SKQ  P  K+VD+QSVLKRLQSELMALMMSG+ GISAFP
Sbjct: 1   MATVNGYQGNTPVASAG--APSKQTVPTVKTVDTQSVLKRLQSELMALMMSGESGISAFP 58

Query: 410 EEDNIFCWKGTITGSKETVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNIC 589
           EEDNIFCWKGTITGSK+TVFEGTEYKLSLSFP DYPFKPPKVKFET CFHPNVDVYGNIC
Sbjct: 59  EEDNIFCWKGTITGSKDTVFEGTEYKLSLSFPNDYPFKPPKVKFETSCFHPNVDVYGNIC 118

Query: 590 LDILQDKWSSAYDVRSILLSIQSLLGEPNTSSPLNTQAAALWCNQEEYRKMVEKLYKP 763
           LDILQDKWSSAYDVR+IL+SIQSLLGEPN SSPLNTQAA LW NQEEYRKMVEKLYKP
Sbjct: 119 LDILQDKWSSAYDVRTILISIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKP 176


>ref|XP_002885355.1| ubiquitin-conjugating enzyme 19 [Arabidopsis lyrata subsp. lyrata]
           gi|297331195|gb|EFH61614.1| ubiquitin-conjugating enzyme
           19 [Arabidopsis lyrata subsp. lyrata]
          Length = 181

 Score =  303 bits (775), Expect = 6e-80
 Identities = 147/178 (82%), Positives = 154/178 (86%)
 Frame = +2

Query: 230 MPTTQGYQVNTPASMVPNIPTSKQPTPVAKSVDSQSVLKRLQSELMALMMSGDPGISAFP 409
           M T  GY  NTPA+  P    SKQP P  K+VDSQSVLKRLQSELM LMM GDPGISAFP
Sbjct: 1   MATVNGYTGNTPAATTPVATGSKQPAPPTKTVDSQSVLKRLQSELMGLMMGGDPGISAFP 60

Query: 410 EEDNIFCWKGTITGSKETVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNIC 589
           EEDNIFCWKGTITGSK+TVFEGTEY+LSL+F  DYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 590 LDILQDKWSSAYDVRSILLSIQSLLGEPNTSSPLNTQAAALWCNQEEYRKMVEKLYKP 763
           LDILQDKWSSAYDVR+ILLSIQSLLGEPN SSPLN QAA LW NQEEYRKMVEKLYKP
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKP 178


>ref|XP_002278564.1| PREDICTED: ubiquitin-conjugating enzyme E2 19 [Vitis vinifera]
           gi|147820972|emb|CAN74597.1| hypothetical protein
           VITISV_003479 [Vitis vinifera]
           gi|297734957|emb|CBI17191.3| unnamed protein product
           [Vitis vinifera]
          Length = 177

 Score =  301 bits (771), Expect = 2e-79
 Identities = 146/161 (90%), Positives = 151/161 (93%)
 Frame = +2

Query: 278 PNIPTSKQPTPVAKSVDSQSVLKRLQSELMALMMSGDPGISAFPEEDNIFCWKGTITGSK 457
           P +  +KQP P AKSVD+QSVLKRLQSELMALMMSGD GISAFPEEDNIFCWKGTI GSK
Sbjct: 15  PAVAATKQPLPPAKSVDTQSVLKRLQSELMALMMSGDGGISAFPEEDNIFCWKGTINGSK 74

Query: 458 ETVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRS 637
           +TVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVR+
Sbjct: 75  DTVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRT 134

Query: 638 ILLSIQSLLGEPNTSSPLNTQAAALWCNQEEYRKMVEKLYK 760
           ILLSIQSLLGEPN SSPLNTQAAALW NQEEYRKMV KLYK
Sbjct: 135 ILLSIQSLLGEPNISSPLNTQAAALWSNQEEYRKMVMKLYK 175


>ref|XP_004140207.1| PREDICTED: ubiquitin-conjugating enzyme E2 19-like [Cucumis
           sativus] gi|449482542|ref|XP_004156314.1| PREDICTED:
           ubiquitin-conjugating enzyme E2 19-like [Cucumis
           sativus]
          Length = 181

 Score =  299 bits (765), Expect = 8e-79
 Identities = 149/178 (83%), Positives = 154/178 (86%)
 Frame = +2

Query: 230 MPTTQGYQVNTPASMVPNIPTSKQPTPVAKSVDSQSVLKRLQSELMALMMSGDPGISAFP 409
           M     Y  NT A   P +  +KQ  P AK+ DSQSVLKRLQSELMALMMSGD GISAFP
Sbjct: 1   MAAINRYTDNT-APANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 59

Query: 410 EEDNIFCWKGTITGSKETVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNIC 589
           EEDNIFCWKGTITGSKETVFEGTEY+LS SFP DYPFKPPKVKFETGCFHPNVDVYGNIC
Sbjct: 60  EEDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 119

Query: 590 LDILQDKWSSAYDVRSILLSIQSLLGEPNTSSPLNTQAAALWCNQEEYRKMVEKLYKP 763
           LDILQDKWSSAYDVR+ILLSIQSLLGEPN SSPLNTQAA LW NQEEYRKMVEKLYKP
Sbjct: 120 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKP 177


>ref|NP_564572.1| ubiquitin-conjugating enzyme E2 20 [Arabidopsis thaliana]
           gi|297852748|ref|XP_002894255.1| ubiquitin-conjugating
           enzyme 20 [Arabidopsis lyrata subsp. lyrata]
           gi|75329783|sp|Q8L7T3.1|UBC20_ARATH RecName:
           Full=Ubiquitin-conjugating enzyme E2 20; AltName:
           Full=Ubiquitin carrier protein 20
           gi|22530867|gb|AAM96887.1| ubiquitin-conjugating enzyme
           [Arabidopsis thaliana] gi|29028822|gb|AAO64790.1|
           At1g50490 [Arabidopsis thaliana]
           gi|66354450|gb|AAY44860.1| ubiquitinating enzyme
           [Arabidopsis thaliana] gi|110742990|dbj|BAE99389.1|
           putative cyclin-specific ubiquitin carrier protein
           [Arabidopsis thaliana] gi|297340097|gb|EFH70514.1|
           ubiquitin-conjugating enzyme 20 [Arabidopsis lyrata
           subsp. lyrata] gi|332194435|gb|AEE32556.1|
           ubiquitin-conjugating enzyme E2 20 [Arabidopsis
           thaliana]
          Length = 180

 Score =  299 bits (765), Expect = 8e-79
 Identities = 149/178 (83%), Positives = 153/178 (85%)
 Frame = +2

Query: 230 MPTTQGYQVNTPASMVPNIPTSKQPTPVAKSVDSQSVLKRLQSELMALMMSGDPGISAFP 409
           M    GYQ NTPA   P    SKQP    K+VDSQSVLKRLQSELM LMM G PGISAFP
Sbjct: 1   MAAVNGYQGNTPADP-PASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFP 59

Query: 410 EEDNIFCWKGTITGSKETVFEGTEYKLSLSFPTDYPFKPPKVKFETGCFHPNVDVYGNIC 589
           EEDNIFCWKGTITGSK+TVFEGTEY+LSLSF  DYPFKPPKVKFET CFHPNVDVYGNIC
Sbjct: 60  EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNIC 119

Query: 590 LDILQDKWSSAYDVRSILLSIQSLLGEPNTSSPLNTQAAALWCNQEEYRKMVEKLYKP 763
           LDILQDKWSSAYDVR+ILLSIQSLLGEPN SSPLNTQAA LW NQEEYRKMVEKLYKP
Sbjct: 120 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKP 177


Top