BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012356
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   131   2e-28
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   128   2e-27
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   128   2e-27
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26
ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...   121   3e-25

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  131 bits (330), Expect = 2e-28
 Identities = 103/313 (32%), Positives = 149/313 (47%), Gaps = 22/313 (7%)
 Frame = +2

Query: 80  DWSNFPNELLELIVQRLISNFVDVIRFQAVCKSWRFISXXXXXXXXXXXXWLMISTGKTI 259
           DWS  P EL+E+I + L + + D +  +AVC +WRF              WLM+   ++ 
Sbjct: 4   DWSQLPPELIEIISKGL-TIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQSQ 62

Query: 260 VSQCR--FFSLSENRIYSLDCVSDC-----SGSSHGWLFVEDKGYITCTLLNPVSRVRVV 418
            +Q R  FFSLS N+ + L+           GSSHGWL + D    T  L+NP++R ++ 
Sbjct: 63  SNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTP-TILLINPLTRAKLS 121

Query: 419 LPSLQSVILLGTYFYNLDDDEFAERQF---RRYFILNQGK--FIVKAALSSSPGFNASEA 583
           LP L S   + ++ Y+    E+A R     R    L Q +  FI K  LSSSP     + 
Sbjct: 122 LPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSP---LKDN 178

Query: 584 CLVMLIVDHTHRHLAYCKLGDKDWTLARDGMHLRCEDVIYFQGRFYAVDAYGRIVVC--- 754
             V++ + +    LAYC+ GDK W+L  +     CEDVI+  G FYAV+  G+IV+C   
Sbjct: 179 NFVVIAILNQTDDLAYCRNGDKSWSLVENARSF-CEDVIFVNGMFYAVNKAGQIVICDIS 237

Query: 755 GPLPVTREFKDPESFKADKTYLVESSGELLLVMR-------FRGRSSNSETVCKTVLFKV 913
              P     + P     D  YLV S  ELLLV R       F         + +T+ F+V
Sbjct: 238 SDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEV 297

Query: 914 LHEDPISKNWVEV 952
              D     W+ +
Sbjct: 298 FRLDWNGPQWLRM 310


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  128 bits (322), Expect = 2e-27
 Identities = 101/308 (32%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
 Frame = +2

Query: 74  MRDWSNFPNELLELIVQRLISNFVDVIRFQAVCKSWRFISXXXXXXXXXXXXWLMISTGK 253
           M DWS    ELL+ I ++    + D +RF+AVC +WR               WLM+   +
Sbjct: 1   MADWSQLHPELLDFIAKKF-KIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQ 59

Query: 254 TIVSQCRFFSLSENRIYSLDCVSDCS-----GSSHGWLFVEDKGYITCTLLNPVSRVRVV 418
              +   FFSLS N+ + L            GSSHGWL + D+      LLNP++R +V 
Sbjct: 60  PHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAP-EIFLLNPLTRSKVH 118

Query: 419 LPSLQSVILLGTYFYNLDDDEFAERQ-----FRRYFILNQGKFIVKAALSSSPGFNASEA 583
           LP L +   +  + +     E+A R      + R     +  FI K  LSSSP  N S+ 
Sbjct: 119 LPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPA-NGSDF 177

Query: 584 CLVMLIVDHTHRHLAYCKLGDKDWTLARDGMHLRCEDVIYFQGRFYAVDAYGRIVVC--- 754
             V+++  +    LA C+  D  WT   D      EDVI+ +G FYAV+ YG I VC   
Sbjct: 178 IAVVIL--NQTGDLALCRKSDDSWTFLEDAQSYS-EDVIFHRGLFYAVNKYGSIAVCDVS 234

Query: 755 GPLPVTREFKDPESFKADKTYLVESSGELLLVMRFRGRSSNSE-----TVCKTVLFKVLH 919
           G  P     + P+ F  D  YLVES  ELLLV R+   + + E      + +T  F+V  
Sbjct: 235 GSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCR 294

Query: 920 EDPISKNW 943
            D  +  W
Sbjct: 295 LDSKAPRW 302


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  128 bits (321), Expect = 2e-27
 Identities = 101/308 (32%), Positives = 143/308 (46%), Gaps = 18/308 (5%)
 Frame = +2

Query: 74  MRDWSNFPNELLELIVQRLISNFVDVIRFQAVCKSWRFISXXXXXXXXXXXXWLMISTGK 253
           M DWS    ELL+ I ++    + D +RF+AVC +WR               WLM+   +
Sbjct: 1   MADWSQLHPELLDFIAKKF-KIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQ 59

Query: 254 TIVSQCRFFSLSENRIYSLDCVSDCS-----GSSHGWLFVEDKGYITCTLLNPVSRVRVV 418
              +   FFSLS N+ + L            GSSHGWL + D+      LLNP++R +V 
Sbjct: 60  PHHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAP-EIFLLNPLTRSKVH 118

Query: 419 LPSLQSVILLGTYFYNLDDDEFAERQ-----FRRYFILNQGKFIVKAALSSSPGFNASEA 583
           LP L +   +  + +     E+A R      + R     +  FI K  LSSSP  N S+ 
Sbjct: 119 LPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPA-NGSDF 177

Query: 584 CLVMLIVDHTHRHLAYCKLGDKDWTLARDGMHLRCEDVIYFQGRFYAVDAYGRIVVC--- 754
             V+++  +    LA C+  D  WT   D      EDVI+ +G FYAV+ YG I VC   
Sbjct: 178 IAVVIL--NQTGDLALCRKSDDSWTFLEDAQSY-AEDVIFHRGLFYAVNKYGSIAVCDVS 234

Query: 755 GPLPVTREFKDPESFKADKTYLVESSGELLLVMRFRGRSSNSE-----TVCKTVLFKVLH 919
           G  P     + P+ F  D  YLVES  ELLLV R+   + + E      + +T  F+V  
Sbjct: 235 GSSPRVSIIEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCR 294

Query: 920 EDPISKNW 943
            D  +  W
Sbjct: 295 LDLKAPRW 302


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  125 bits (315), Expect = 1e-26
 Identities = 101/314 (32%), Positives = 149/314 (47%), Gaps = 23/314 (7%)
 Frame = +2

Query: 80  DWSNFPNELLELIVQRLISNFVDVIRFQAVCKSWRFISXXXXXXXXXXXXWLMISTGKTI 259
           DW+  P EL+E+I ++ I+ + D + FQAVC +W+               WL++   ++ 
Sbjct: 4   DWTQLPPELIEIISKK-ITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQSN 62

Query: 260 VSQCR-FFSLSENRIYSLDCVSDCS-----GSSHGWLFVEDKGYITCTLLNPVSRVRVVL 421
            S  R FF+LS  + +SL+           GSSHGWL + D    +  ++NP++R ++ L
Sbjct: 63  QSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSP-SILVINPLTRRKIHL 121

Query: 422 PSLQSVILLGTYFYNLDDDEFAERQFRRYFILN-QGK------------FIVKAALSSSP 562
           P++ S       F N+   ++A    R Y ++N QG+            FI K  +SSSP
Sbjct: 122 PAISS-------FPNVVSFDYANVG-REYLLVNPQGERNTASLRQMRDGFIKKVVMSSSP 173

Query: 563 GFNASEACLVMLIVDHTHRHLAYCKLGDKDWTLARDGMHLRCEDVIYFQGRFYAVDAYGR 742
                +  + M I+  T   LAYCK GD+ W +  +      EDVIYF G FYAV+  G+
Sbjct: 174 LEKKGDFFVAMAILCSTG-DLAYCKNGDECWNIVENSRSFS-EDVIYFNGLFYAVNKAGQ 231

Query: 743 IVVC---GPLPVTREFKDPESFKADKTYLVESSGELLLVMRFRGRSSNSET-VCKTVLFK 910
           IVVC   G  P     + P     D  YLV S   LLLV R+       +  + KT  F+
Sbjct: 232 IVVCDVNGNSPKVSFIETPRQIGGDMQYLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFE 291

Query: 911 VLHEDPISKNWVEV 952
           V   D     W  V
Sbjct: 292 VFKLDLNGPRWERV 305


>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score =  121 bits (303), Expect = 3e-25
 Identities = 94/307 (30%), Positives = 142/307 (46%), Gaps = 14/307 (4%)
 Frame = +2

Query: 74  MRDWSNFPNELLELIVQRLISNFVDVIRFQAVCKSWRFISXXXXXXXXXXXXWLMISTGK 253
           M +WS  P ELL+ I Q+  SN+VD I  +AVCKSW                WL++   K
Sbjct: 1   MSNWSELPQELLQTITQKQ-SNYVDYISTRAVCKSWWSAIPKKPHDLLCQLPWLLLPYHK 59

Query: 254 TIVSQCRFFSLSENRIYSLDCVSD----CSGSSHGWL-FVEDKGYITCTLLNPVSRVRVV 418
              +   F++L++ + Y L+        C GSSHGWL  VED   I   LLNP+++ R+ 
Sbjct: 60  NNPNHRGFYNLADGKTYHLELPETIEKRCCGSSHGWLVMVEDTPSIF--LLNPLTKARIE 117

Query: 419 LPSLQSVILLGTYFYNLDDDEFAERQFRRYFILNQGKFIVKAALSSSPGFNASEACLVML 598
           LPSL +     T     +     E    +  +  +  +I KA +S  P         +  
Sbjct: 118 LPSLSTFPYFPTEVVYENSRNINEYFNTKAKLRIRETYIRKAIVSEDPSTGNFAVMAIYK 177

Query: 599 IVDHTHRHLAYCKLGDKDW-TLARDGMHLRCEDVIYFQGRFYAVDAYGRIVVC----GPL 763
            ++ T  ++A+CK GD  W T+      +  +DV++ +G+FYAVD  GR+ +C     P 
Sbjct: 178 TINSTE-NIAFCKSGDATWFTIQETSQKIHYQDVMFHRGKFYAVDDKGRVSICITDINP- 235

Query: 764 PVTREFKDPESFKA----DKTYLVESSGELLLVMRFRGRSSNSETVCKTVLFKVLHEDPI 931
           P   +  DP          + YL     +L+L  RFR +   S    +T  F V   D  
Sbjct: 236 PSVIQVADPPPVPPLMGYKQWYLASLDEDLILAGRFR-KYRGSGYEYQTHKFMVYKLDAS 294

Query: 932 SKNWVEV 952
           S NW+E+
Sbjct: 295 SSNWLEL 301