BLASTX nr result

ID: Cimicifuga21_contig00012347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012347
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...   268   1e-69
emb|CAN64522.1| hypothetical protein VITISV_043621 [Vitis vinifera]   255   8e-66
ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago ...   248   2e-63
ref|XP_003588508.1| hypothetical protein MTR_1g007950 [Medicago ...   237   3e-60
emb|CBI23013.3| unnamed protein product [Vitis vinifera]              234   2e-59

>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score =  268 bits (686), Expect = 1e-69
 Identities = 144/251 (57%), Positives = 181/251 (72%), Gaps = 7/251 (2%)
 Frame = -3

Query: 733 MEKKSP---GKRPREVYLNLEDDLN-VYKFKVLLPNGTSVDLTLSRSEDDD--MYLEEFI 572
           ME++ P   GK+   V ++ ++DL  +YKFK+LLPNGTS+ L L   +  +  M L+EFI
Sbjct: 32  MEEEVPPQRGKKRSIVEISGDNDLGAIYKFKILLPNGTSLGLNLHEHKLSNLLMPLQEFI 91

Query: 571 SEVRCKY-EXXXXXXXXXXXXXVLWKSPDVYLEDFSGIKITKIIDFRCFASNKCHFLRLH 395
             VR +Y               ++WKS D++L D S  ++   ++FR F  +KCH L+L+
Sbjct: 92  GLVRTEYFRTRRQPESPGTRQKIMWKSKDIFLVDASENRMKHTVNFRKFEPHKCHILQLN 151

Query: 394 DGVKEDIAENFENMWDLTPDTDMLMELPAEYTFETALADLIDNSLQAVWSNDSNEKRLVS 215
           DG  +  A+ F+NMWDLTPDTD+L ELP EY FETALADLIDNSLQAVWSN  +E+RL+S
Sbjct: 152 DGSGQS-ADTFKNMWDLTPDTDLLAELPEEYAFETALADLIDNSLQAVWSNGMSERRLIS 210

Query: 214 VTIDEHGISIFDTGPGMDGNDKNSIVKWGKMGASLHRSARGLAIGGKPPYLTPSFGMFGY 35
           V I E  ISIFD+GPGMDG+D+NSIVKWGKMGASLHRS++  AIGGKPPYL P FGMFGY
Sbjct: 211 VDIVEDRISIFDSGPGMDGSDENSIVKWGKMGASLHRSSKAQAIGGKPPYLKPFFGMFGY 270

Query: 34  GGFIASMHLGR 2
           GG IASMHLGR
Sbjct: 271 GGPIASMHLGR 281


>emb|CAN64522.1| hypothetical protein VITISV_043621 [Vitis vinifera]
          Length = 1459

 Score =  255 bits (652), Expect = 8e-66
 Identities = 140/251 (55%), Positives = 174/251 (69%), Gaps = 7/251 (2%)
 Frame = -3

Query: 733 MEKKSP---GKRPREVYLNLEDDLN-VYKFKVLLPNGTSVDLTLSRSEDDD--MYLEEFI 572
           ME++ P   GK+   V ++ ++DL  +YKFK+LLPNGTS+ L L   +  +  M L+EFI
Sbjct: 110 MEEEVPPQRGKKRSIVEISGDNDLGAIYKFKILLPNGTSLGLNLHEHKLSNLLMPLQEFI 169

Query: 571 SEVRCKY-EXXXXXXXXXXXXXVLWKSPDVYLEDFSGIKITKIIDFRCFASNKCHFLRLH 395
             VR +Y               ++WKS D++L D S  ++   ++FR F  +KCH L+L+
Sbjct: 170 GLVRTEYFRTRRQPESPGTRQKIMWKSKDIFLVDASENRMKHTVNFRKFEPHKCHILQLN 229

Query: 394 DGVKEDIAENFENMWDLTPDTDMLMELPAEYTFETALADLIDNSLQAVWSNDSNEKRLVS 215
                       NMWDLTPDTD+L ELP EY FETALADLIDNSLQAVWSN  +E+RL+S
Sbjct: 230 ------------NMWDLTPDTDLLAELPEEYAFETALADLIDNSLQAVWSNGMSERRLIS 277

Query: 214 VTIDEHGISIFDTGPGMDGNDKNSIVKWGKMGASLHRSARGLAIGGKPPYLTPSFGMFGY 35
           V I E  ISIFD+GPGMDG+D+NSIVKWGKMGASLHRS++  AIGGKPPYL P FGMFGY
Sbjct: 278 VDIVEDRISIFDSGPGMDGSDENSIVKWGKMGASLHRSSKAQAIGGKPPYLKPFFGMFGY 337

Query: 34  GGFIASMHLGR 2
           GG IASMHLGR
Sbjct: 338 GGPIASMHLGR 348


>ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago truncatula]
           gi|355477563|gb|AES58766.1| hypothetical protein
           MTR_1g008050 [Medicago truncatula]
          Length = 1675

 Score =  248 bits (632), Expect = 2e-63
 Identities = 130/257 (50%), Positives = 170/257 (66%), Gaps = 21/257 (8%)
 Frame = -3

Query: 709 RPREVYLNLEDD----LNVYKFKVLLPNGTSVDLTLSRSEDDDMYLEEFISEVRCKYEXX 542
           + R++ LN +DD      + KFKVLLPNGTSV+L +  +E+  M+  EF+  +R +Y   
Sbjct: 11  KKRKLVLNDDDDDTGIRKMRKFKVLLPNGTSVELKVLNTENA-MHFGEFVGLIRTRYLQV 69

Query: 541 XXXXXXXXXXXVL-WKSPDVYLEDFSGIKITKIIDFRCFASNKCHFLRLHDGVKEDIAEN 365
                       + W S  ++LED S  KI  ++DF+ F  NKCH LRL+DG K D+A+ 
Sbjct: 70  QRKNESMRKKREINWNSGGLFLEDVSDNKIKNVVDFKNFIPNKCHILRLNDG-KGDVADT 128

Query: 364 FENMWDLTPDTDMLMELPAEYTFETALADLIDNSLQAVWSNDSNEKRLVSVTIDEHGISI 185
           FENMWDLTPDTD+L+ELP +Y FE A+ADLIDN+LQAVWSN+ N ++L+ V +    I+I
Sbjct: 129 FENMWDLTPDTDLLLELPEDYNFEAAIADLIDNALQAVWSNEKNSRKLIRVNVTNKKITI 188

Query: 184 FDTGPGMDGNDKNSIVKWGKMGASLHRSARGLAIGGKPPYL----------------TPS 53
           FD G GMD +++NS+VKWGKMGASLHR ++  AIGGKPPYL                 P 
Sbjct: 189 FDNGSGMDDSNENSLVKWGKMGASLHRLSKSQAIGGKPPYLMVFFIFVLSDPSFFVERPY 248

Query: 52  FGMFGYGGFIASMHLGR 2
           FGM+GYGG IASMHLGR
Sbjct: 249 FGMYGYGGPIASMHLGR 265


>ref|XP_003588508.1| hypothetical protein MTR_1g007950 [Medicago truncatula]
           gi|355477556|gb|AES58759.1| hypothetical protein
           MTR_1g007950 [Medicago truncatula]
          Length = 521

 Score =  237 bits (604), Expect = 3e-60
 Identities = 121/227 (53%), Positives = 149/227 (65%), Gaps = 5/227 (2%)
 Frame = -3

Query: 667 VYKFKVLLPNGTSVDLTLSRSEDDDMYLEEFISEVRCKYEXXXXXXXXXXXXXVL-WKSP 491
           + +FKVLLPNGT V+L +    +D+M  EEFI  VR +Y               + W   
Sbjct: 33  IRRFKVLLPNGTIVELKVRIPNEDEMRFEEFIHLVRIRYLKIRKNSESMKKKSEINWNCD 92

Query: 490 DVYLEDFSGIKITKIIDFRCFASNKCHFLRLHDGVKEDIAENFENMWDLTPDTDMLMELP 311
           D+YLED +  KI  ++DF  F   KCH LRL      +  E FENMWDLTPD D+LMELP
Sbjct: 93  DLYLEDANDNKIKDVVDFGNFVPKKCHILRLKVNGIGEFPEWFENMWDLTPDIDLLMELP 152

Query: 310 AEYTFETALADLI----DNSLQAVWSNDSNEKRLVSVTIDEHGISIFDTGPGMDGNDKNS 143
            +Y FE A+ DLI    DN+LQAVW N  + ++L+ V +    I+IFD+G GMD +D+NS
Sbjct: 153 EDYNFEAAITDLIVSSLDNALQAVWFNGKDNRKLIGVNVSNKKITIFDSGSGMDDSDENS 212

Query: 142 IVKWGKMGASLHRSARGLAIGGKPPYLTPSFGMFGYGGFIASMHLGR 2
           IVKWGKMGASLHR ++  AIGGKPPYL P FGMFGYGG IASMHLGR
Sbjct: 213 IVKWGKMGASLHRQSKSQAIGGKPPYLMPCFGMFGYGGPIASMHLGR 259


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score =  234 bits (598), Expect = 2e-59
 Identities = 127/231 (54%), Positives = 164/231 (70%), Gaps = 7/231 (3%)
 Frame = -3

Query: 733 MEKKSP---GKRPREVYLNLEDDLN-VYKFKVLLPNGTSVDLTLSRSEDDD--MYLEEFI 572
           ME++ P   GK+   V ++ ++DL  +YKFK+LLPNGTS+ L L   +  +  M L+EFI
Sbjct: 1   MEEEVPPQRGKKRSIVEISGDNDLGAIYKFKILLPNGTSLGLNLHEHKLSNLLMPLQEFI 60

Query: 571 SEVRCKY-EXXXXXXXXXXXXXVLWKSPDVYLEDFSGIKITKIIDFRCFASNKCHFLRLH 395
             VR +Y               ++WKS D++L D S  ++   ++FR F  +KCH L+L+
Sbjct: 61  GLVRTEYFRTRRQPESPGTRQKIMWKSKDIFLVDASENRMKHTVNFRKFEPHKCHILQLN 120

Query: 394 DGVKEDIAENFENMWDLTPDTDMLMELPAEYTFETALADLIDNSLQAVWSNDSNEKRLVS 215
           DG  +  A+ F+NMWDLTPDTD+L ELP EY FETALADLIDNSLQAVWSN  +E+RL+S
Sbjct: 121 DGSGQS-ADTFKNMWDLTPDTDLLAELPEEYAFETALADLIDNSLQAVWSNGMSERRLIS 179

Query: 214 VTIDEHGISIFDTGPGMDGNDKNSIVKWGKMGASLHRSARGLAIGGKPPYL 62
           V I E  ISIFD+GPGMDG+D+NSIVKWGKMGASLHRS++  AIGGKPPYL
Sbjct: 180 VDIVEDRISIFDSGPGMDGSDENSIVKWGKMGASLHRSSKAQAIGGKPPYL 230


Top