BLASTX nr result

ID: Cimicifuga21_contig00012342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012342
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511901.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_002301369.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002320152.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|ABQ41984.1| mechanosensitive ion channel domain-containing pr...    59   5e-07
gb|ABQ41983.1| mechanosensitive ion channel domain-containing pr...    59   5e-07

>ref|XP_002511901.1| conserved hypothetical protein [Ricinus communis]
           gi|223549081|gb|EEF50570.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 490

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 35/83 (42%), Positives = 48/83 (57%)
 Frame = -2

Query: 275 IIPNSVFPCAEIVNLSRFALRDMKLKFPIQIDDLEKIAQILDDMKSTAKSRPEIFVGNEV 96
           I+PNS+F    IVN SR   R M  K P+ I+DL KI Q+ +D+KS  K  P++F+G EV
Sbjct: 370 IVPNSLFSSQVIVNKSRAQWRAMMSKIPVNIEDLNKIPQVSNDIKSMLKLNPKVFLGKEV 429

Query: 95  LFFSVGNEVGIKGSSVAVMTIEC 27
            +  +        SS A +TI C
Sbjct: 430 PYCFLSR----IESSFAELTIGC 448


>ref|XP_002301369.1| predicted protein [Populus trichocarpa] gi|222843095|gb|EEE80642.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/86 (38%), Positives = 48/86 (55%)
 Frame = -2

Query: 275 IIPNSVFPCAEIVNLSRFALRDMKLKFPIQIDDLEKIAQILDDMKSTAKSRPEIFVGNEV 96
           ++PNS+F    IVN SR   R +  K P+ +DD+EKI QI +D+KS   S P +F+G E 
Sbjct: 414 LVPNSLFSSQVIVNKSRAQWRAVVSKIPVIVDDVEKIPQISNDIKSMLNSNPNVFLGKEA 473

Query: 95  LFFSVGNEVGIKGSSVAVMTIECKFK 18
            +  +        SS A +T+ C  K
Sbjct: 474 PYCYLSR----IESSFAELTLGCNLK 495


>ref|XP_002320152.1| predicted protein [Populus trichocarpa] gi|222860925|gb|EEE98467.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/86 (38%), Positives = 48/86 (55%)
 Frame = -2

Query: 275 IIPNSVFPCAEIVNLSRFALRDMKLKFPIQIDDLEKIAQILDDMKSTAKSRPEIFVGNEV 96
           ++PN++F    IVN SR   R M  K P+ +DD+EKI QI +D+K+  KS   IF+G E 
Sbjct: 274 LVPNALFSSQVIVNKSRAQWRAMVSKIPVTVDDVEKIPQISNDIKNMLKSNANIFLGKEA 333

Query: 95  LFFSVGNEVGIKGSSVAVMTIECKFK 18
            +  +        SS A +T+ C  K
Sbjct: 334 PYCYLSR----IESSFAELTLGCNLK 355


>gb|ABQ41984.1| mechanosensitive ion channel domain-containing protein / MS ion
           channel domain-containing protein [Sonneratia apetala]
          Length = 111

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -2

Query: 275 IIPNSVFPCAEIVNLSRFALRDMKLKFPIQIDDLEKIAQILDDMKSTAKSRPEIFVGNEV 96
           I+PNS+F    IVN SR   R M  K P+  DDL+KI Q+ +D+K+  K  P++F+G EV
Sbjct: 17  IVPNSLFSSQVIVNKSRAEWRAMVTKIPLHSDDLDKIPQVTNDIKNMLKIHPKVFLGKEV 76


>gb|ABQ41983.1| mechanosensitive ion channel domain-containing protein / MS ion
           channel domain-containing protein [Sonneratia ovata]
          Length = 111

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/60 (46%), Positives = 39/60 (65%)
 Frame = -2

Query: 275 IIPNSVFPCAEIVNLSRFALRDMKLKFPIQIDDLEKIAQILDDMKSTAKSRPEIFVGNEV 96
           I+PNS+F    IVN SR   R M  K P+  DDL+KI Q+ +D+K+  K  P++F+G EV
Sbjct: 17  IVPNSLFSSQVIVNKSRAEWRAMVTKIPLHSDDLDKIPQVTNDIKNMLKIHPKVFLGKEV 76


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