BLASTX nr result

ID: Cimicifuga21_contig00012336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012336
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323900.1| predicted protein [Populus trichocarpa] gi|1...    98   2e-18
ref|XP_002280026.1| PREDICTED: uncharacterized protein LOC100244...    98   3e-18
ref|XP_002305356.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
gb|AFK40257.1| unknown [Lotus japonicus]                               87   4e-15
ref|XP_002527615.1| conserved hypothetical protein [Ricinus comm...    83   9e-14

>ref|XP_002323900.1| predicted protein [Populus trichocarpa] gi|118481606|gb|ABK92745.1|
           unknown [Populus trichocarpa]
           gi|222866902|gb|EEF04033.1| predicted protein [Populus
           trichocarpa]
          Length = 121

 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 51/118 (43%), Positives = 79/118 (66%), Gaps = 5/118 (4%)
 Frame = -3

Query: 833 QQIQSSMENQTPSALNST-----ESMEKTTPTAQNLKADEKTPTFVENCCKKNSSPNPLK 669
           + I  S++N   + + S       ++E  TP+ ++ + D+K+    ++  +K+ +P+PLK
Sbjct: 2   ENILCSVDNMQETPIKSQIQSKPNNLECITPSMEDQEIDKKSENSSKDL-RKSGTPDPLK 60

Query: 668 VPKAFKYPERYKSPTDQMVSPISKGLLARRKKMGPVLPPALTPPKIQDQCSQGVGLFQ 495
           VPKAFKYPERY+SPTD M+SPI+KG+LAR KK G +LPP+   PK+QD  +Q V  F+
Sbjct: 61  VPKAFKYPERYRSPTDLMISPITKGILARNKKGGALLPPSWNQPKVQDVETQDVVPFK 118


>ref|XP_002280026.1| PREDICTED: uncharacterized protein LOC100244709 isoform 1 [Vitis
           vinifera] gi|296082203|emb|CBI21208.3| unnamed protein
           product [Vitis vinifera]
          Length = 112

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 49/111 (44%), Positives = 68/111 (61%)
 Frame = -3

Query: 827 IQSSMENQTPSALNSTESMEKTTPTAQNLKADEKTPTFVENCCKKNSSPNPLKVPKAFKY 648
           +++ +E    + + S   +        N +  +K      +   K ++P+ LKVPKAFKY
Sbjct: 1   METVLETPLKNPVQSENPLSDYKTPPPNQETAQKIQNSANDSGNKTATPDRLKVPKAFKY 60

Query: 647 PERYKSPTDQMVSPISKGLLARRKKMGPVLPPALTPPKIQDQCSQGVGLFQ 495
           PERY+SPTD M+SP+SKGLLAR +K G +LPPA   PK+QD   Q VGLFQ
Sbjct: 61  PERYRSPTDLMISPVSKGLLARSRKTGSLLPPAKIQPKVQDLRVQEVGLFQ 111


>ref|XP_002305356.1| predicted protein [Populus trichocarpa] gi|222848320|gb|EEE85867.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 53/115 (46%), Positives = 77/115 (66%), Gaps = 1/115 (0%)
 Frame = -3

Query: 833 QQIQSSMENQTPSALNSTESM-EKTTPTAQNLKADEKTPTFVENCCKKNSSPNPLKVPKA 657
           Q+ ++  E    S + S  +M +  TP  ++ + D+++     N  +K+S+P  L+VPKA
Sbjct: 41  QESENMQETPFKSLMLSKPTMLDCITPAKEDQEMDQESENS-GNDLRKSSAPYHLQVPKA 99

Query: 656 FKYPERYKSPTDQMVSPISKGLLARRKKMGPVLPPALTPPKIQDQCSQGVGLFQN 492
           FK+PERY+SPTD M+SPI+KGLLAR +K G +LPP+L  PK+QD   QG G FQN
Sbjct: 100 FKFPERYRSPTDLMISPITKGLLARNRKGGALLPPSLNQPKVQDVEVQGGG-FQN 153


>gb|AFK40257.1| unknown [Lotus japonicus]
          Length = 129

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 52/104 (50%), Positives = 64/104 (61%), Gaps = 1/104 (0%)
 Frame = -3

Query: 800 PSALNSTESMEKT-TPTAQNLKADEKTPTFVENCCKKNSSPNPLKVPKAFKYPERYKSPT 624
           P    STE   KT TP  Q  + D+   T   +  +K+  P+PL+VPKAFK+PERY SPT
Sbjct: 13  PIEAQSTEPECKTPTPIPQPPQNDDPNST---DELRKSLIPDPLRVPKAFKFPERYTSPT 69

Query: 623 DQMVSPISKGLLARRKKMGPVLPPALTPPKIQDQCSQGVGLFQN 492
           D ++SP++KGLLAR KK    LPP    PKI D   Q VG FQN
Sbjct: 70  DSIMSPVTKGLLARGKKGVAKLPPGKYHPKIPDMSLQEVGPFQN 113


>ref|XP_002527615.1| conserved hypothetical protein [Ricinus communis]
           gi|223532989|gb|EEF34754.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 112

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 44/81 (54%), Positives = 58/81 (71%)
 Frame = -3

Query: 767 KTTPTAQNLKADEKTPTFVENCCKKNSSPNPLKVPKAFKYPERYKSPTDQMVSPISKGLL 588
           KT P  Q+ K D K+     +  +K+S+P+ LKVPKAFKYPERY+SPTD MVSPI+KGLL
Sbjct: 23  KTPP--QDQKMDSKSLNSSGDL-RKSSTPDRLKVPKAFKYPERYRSPTDLMVSPITKGLL 79

Query: 587 ARRKKMGPVLPPALTPPKIQD 525
           AR +K   +LPP++   K+ D
Sbjct: 80  ARNRKGAALLPPSMNQAKVPD 100


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