BLASTX nr result
ID: Cimicifuga21_contig00012334
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012334
(1711 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati... 611 e-172
ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ... 609 e-172
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ... 593 e-167
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ... 592 e-166
ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit ... 588 e-165
>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
subunit S3, putative [Ricinus communis]
Length = 427
Score = 611 bits (1575), Expect = e-172
Identities = 301/423 (71%), Positives = 359/423 (84%), Gaps = 1/423 (0%)
Frame = -2
Query: 1641 SMEALVAHIQTFSNSPQEIAHLHDQLKQAEEGLQAHA-SQLAPYLQQIDPSKHSLGYLYF 1465
S+E+LV IQ S+S +I+ LH+ LKQA++ L + + ++L P+L Q+DPS HSLGYLYF
Sbjct: 5 SIESLVTQIQGLSSSATDISALHNYLKQADDSLHSDSPTRLLPFLDQLDPSVHSLGYLYF 64
Query: 1464 LEAYTGAALSKEQTGELVPIVATFIDACLAEQIRLAPDKFISVCKKFKDEVVLLQSPMRG 1285
LEA T +SKEQ LV I+A F+ +C A+QIRLAPDKFISVCK+FKD+V+LL+ PMRG
Sbjct: 65 LEACTSGPISKEQARTLVLILARFVTSCAADQIRLAPDKFISVCKRFKDQVMLLEEPMRG 124
Query: 1284 IAPIQTAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIGMPKDFFLYCY 1105
+AP+ A+RKLQSS LTTLHP+FL LCLL+KCYK+GL ILE+DIFE+ P+D FLY Y
Sbjct: 125 VAPLLAAVRKLQSSSVHLTTLHPEFLQLCLLSKCYKTGLSILEDDIFEVDQPRDLFLYSY 184
Query: 1104 YGGMICIGQKHFRRAMELLHNVVTAPMSSSNAIAVEAHKKYILLSLIYVGQLSNVLPKYI 925
YGGM+CIGQK FR+A+ELLHNVVTAPMSS NAIAVEA+KKYIL SLI+ GQ S LPKY
Sbjct: 185 YGGMVCIGQKRFRKALELLHNVVTAPMSSINAIAVEAYKKYILASLIHQGQFSTSLPKYA 244
Query: 924 SPTGQRNLRNYCQPYYDLANSYKSGEISEVESSVTANREKFESDNNLGLVKQVVSSLSKR 745
S QRNL+N+CQPY +LANSY +G+I+E+E+ V NREKFESDNNLGLVKQVVSS+ KR
Sbjct: 245 SSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNREKFESDNNLGLVKQVVSSMYKR 304
Query: 744 NIHRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDPE 565
NI RLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEI+ATINQKDGMV F EDPE
Sbjct: 305 NIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDPE 364
Query: 564 QYKTCEMMEHIDSSIQRIISLSKKLSGVDELMSCDPSYLGKAGRERHRYEFDDFDSVPQR 385
QYKTCEM+EHIDSSIQRI++LSKKL+ +DELMSCDP YL KAGRER R++FDDFD+VPQ+
Sbjct: 365 QYKTCEMIEHIDSSIQRIMNLSKKLTAMDELMSCDPLYLAKAGRERQRFDFDDFDTVPQK 424
Query: 384 FNM 376
FN+
Sbjct: 425 FNI 427
>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
gi|296090247|emb|CBI40066.3| unnamed protein product
[Vitis vinifera]
Length = 424
Score = 609 bits (1571), Expect = e-172
Identities = 298/424 (70%), Positives = 356/424 (83%)
Frame = -2
Query: 1647 MESMEALVAHIQTFSNSPQEIAHLHDQLKQAEEGLQAHASQLAPYLQQIDPSKHSLGYLY 1468
M+S+EA+V IQ S +I+ LH LKQA++ L +++LAP+L+Q+DPS H+LGYLY
Sbjct: 1 MDSVEAVVTQIQGLSGGSGDISLLHSLLKQADDLLHNESTRLAPFLEQLDPSIHTLGYLY 60
Query: 1467 FLEAYTGAALSKEQTGELVPIVATFIDACLAEQIRLAPDKFISVCKKFKDEVVLLQSPMR 1288
LEA T + KEQ +LV +A FI+ C AEQI LAPDKF+S+CK+ KD+V+LL++PMR
Sbjct: 61 LLEACTSTPIPKEQANQLVLSIANFINNCSAEQIHLAPDKFVSLCKRLKDQVILLEAPMR 120
Query: 1287 GIAPIQTAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIGMPKDFFLYC 1108
G+AP+ TA+RKLQS+ E LT LHPDFLLLCLLAKCYK+GL ILE+DIFE+ P+DFFLYC
Sbjct: 121 GVAPMLTAVRKLQSASELLTVLHPDFLLLCLLAKCYKTGLCILEDDIFEVDQPRDFFLYC 180
Query: 1107 YYGGMICIGQKHFRRAMELLHNVVTAPMSSSNAIAVEAHKKYILLSLIYVGQLSNVLPKY 928
YYGGMICIGQK FR+A+ELLHNVVTAPMS+ NAIAVEA+KKYIL+SLI+ GQ S PKY
Sbjct: 181 YYGGMICIGQKRFRKALELLHNVVTAPMSTINAIAVEAYKKYILVSLIHNGQFSTTFPKY 240
Query: 927 ISPTGQRNLRNYCQPYYDLANSYKSGEISEVESSVTANREKFESDNNLGLVKQVVSSLSK 748
S QRNL+N+ QPY DLANSY SG+ISE E + NREKFE+D NLGLVKQVVSS+ K
Sbjct: 241 TSSVAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNREKFEADKNLGLVKQVVSSMYK 300
Query: 747 RNIHRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDP 568
RNI RLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEIFATINQKDGMV F EDP
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIFATINQKDGMVRFQEDP 360
Query: 567 EQYKTCEMMEHIDSSIQRIISLSKKLSGVDELMSCDPSYLGKAGRERHRYEFDDFDSVPQ 388
EQYKTCEM+EHIDSSIQRI++LSKKL+ +DEL+SCDP YL KAGRER R++FDD+D+VPQ
Sbjct: 361 EQYKTCEMIEHIDSSIQRIMTLSKKLTTMDELISCDPLYLAKAGRERQRFDFDDYDTVPQ 420
Query: 387 RFNM 376
+FN+
Sbjct: 421 KFNI 424
>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1 [Glycine
max]
Length = 423
Score = 593 bits (1529), Expect = e-167
Identities = 293/424 (69%), Positives = 355/424 (83%)
Frame = -2
Query: 1647 MESMEALVAHIQTFSNSPQEIAHLHDQLKQAEEGLQAHASQLAPYLQQIDPSKHSLGYLY 1468
M+ +EALVA IQ S+SP ++ LH LKQA++ L++ +++LAP L Q+DPS HSLG+LY
Sbjct: 1 MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60
Query: 1467 FLEAYTGAALSKEQTGELVPIVATFIDACLAEQIRLAPDKFISVCKKFKDEVVLLQSPMR 1288
LEA ++K Q +VPIV FI AC EQIRLAPDKF+SVCK+ KD+V+LL++P+R
Sbjct: 61 ILEASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCKRLKDQVMLLEAPIR 120
Query: 1287 GIAPIQTAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIGMPKDFFLYC 1108
G+AP+ A+RKLQ+S E LT LH +FLLLCLLAKCYK+GL IL++D+FE+ P+D FLYC
Sbjct: 121 GVAPLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYC 180
Query: 1107 YYGGMICIGQKHFRRAMELLHNVVTAPMSSSNAIAVEAHKKYILLSLIYVGQLSNVLPKY 928
YYGGMICIGQK F++A++LLHNVVTAPMS+ NAIAVEA+KKYIL+SLI GQ S LPKY
Sbjct: 181 YYGGMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKY 240
Query: 927 ISPTGQRNLRNYCQPYYDLANSYKSGEISEVESSVTANREKFESDNNLGLVKQVVSSLSK 748
S T QRNL+N+CQPY +LANSY +G+I+E+E+ V AN EKFESDNNLGLVKQVVSS+ K
Sbjct: 241 SSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSMYK 300
Query: 747 RNIHRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDP 568
RNI RLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEI+ATINQKDGMV F EDP
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDP 360
Query: 567 EQYKTCEMMEHIDSSIQRIISLSKKLSGVDELMSCDPSYLGKAGRERHRYEFDDFDSVPQ 388
EQYKTCEM+EHIDSSIQRI++LS+KL+ DE +SCD YL KAGRER RY+FDDFD VPQ
Sbjct: 361 EQYKTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFD-VPQ 419
Query: 387 RFNM 376
+FN+
Sbjct: 420 KFNV 423
>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2 [Glycine
max]
Length = 423
Score = 592 bits (1526), Expect = e-166
Identities = 292/424 (68%), Positives = 355/424 (83%)
Frame = -2
Query: 1647 MESMEALVAHIQTFSNSPQEIAHLHDQLKQAEEGLQAHASQLAPYLQQIDPSKHSLGYLY 1468
M+ +EALVA IQ S+SP ++ LH LKQA++ L++ +++LAP L Q+DPS HSLG+LY
Sbjct: 1 MDPLEALVAQIQGLSSSPGDLTRLHTVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60
Query: 1467 FLEAYTGAALSKEQTGELVPIVATFIDACLAEQIRLAPDKFISVCKKFKDEVVLLQSPMR 1288
LEA ++K Q +VPIV FI AC EQIRLAPDKF+SVC++ KD+V+LL++P+R
Sbjct: 61 ILEASMTGPVTKTQAEVVVPIVTRFIGACSTEQIRLAPDKFLSVCRRLKDQVMLLEAPIR 120
Query: 1287 GIAPIQTAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIGMPKDFFLYC 1108
G+AP+ A+RKLQ+S E LT LH +FLLLCLLAKCYK+GL IL++D+FE+ P+D FLYC
Sbjct: 121 GVAPLFNALRKLQASAEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYC 180
Query: 1107 YYGGMICIGQKHFRRAMELLHNVVTAPMSSSNAIAVEAHKKYILLSLIYVGQLSNVLPKY 928
YYGGMICIGQK F++A++LLHNVVTAPMS+ NAIAVEA+KKYIL+SLI GQ S LPKY
Sbjct: 181 YYGGMICIGQKRFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKY 240
Query: 927 ISPTGQRNLRNYCQPYYDLANSYKSGEISEVESSVTANREKFESDNNLGLVKQVVSSLSK 748
S T QRNL+N+CQPY +LANSY +G+I+E+E+ V AN EKFESDNNLGLVKQVVSS+ K
Sbjct: 241 SSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAEKFESDNNLGLVKQVVSSMYK 300
Query: 747 RNIHRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDP 568
RNI RLTQTYLTLSLQDIAN VQLN+ KEAEMHVLQMIQDGEI+ATINQKDGMV F EDP
Sbjct: 301 RNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDP 360
Query: 567 EQYKTCEMMEHIDSSIQRIISLSKKLSGVDELMSCDPSYLGKAGRERHRYEFDDFDSVPQ 388
EQYKTCEM+EHIDSSIQRI++LS+KL+ DE +SCD YL KAGRER RY+FDDFD VPQ
Sbjct: 361 EQYKTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFD-VPQ 419
Query: 387 RFNM 376
+FN+
Sbjct: 420 KFNV 423
>ref|XP_003553864.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1 [Glycine
max]
Length = 423
Score = 588 bits (1516), Expect = e-165
Identities = 290/424 (68%), Positives = 352/424 (83%)
Frame = -2
Query: 1647 MESMEALVAHIQTFSNSPQEIAHLHDQLKQAEEGLQAHASQLAPYLQQIDPSKHSLGYLY 1468
M+ +EALVA IQ S++P ++ LH LKQA++ L++ +++LAP L Q+DPS HSLG+LY
Sbjct: 1 MDPLEALVAQIQGLSSTPGDLTRLHSVLKQADDSLRSESTRLAPILTQLDPSIHSLGFLY 60
Query: 1467 FLEAYTGAALSKEQTGELVPIVATFIDACLAEQIRLAPDKFISVCKKFKDEVVLLQSPMR 1288
LEA ++K Q +VPIV FI AC EQIRLAPDKF+SVCK+ KD+V+LL++P+R
Sbjct: 61 ILEASMTDPVTKTQAETVVPIVTRFIGACSPEQIRLAPDKFLSVCKRLKDQVMLLEAPIR 120
Query: 1287 GIAPIQTAIRKLQSSPEQLTTLHPDFLLLCLLAKCYKSGLGILEEDIFEIGMPKDFFLYC 1108
G+AP+ TA+RKLQ S E LT LH +FLLLCLLAKCYK+GL IL++D+FE+ P+D FLYC
Sbjct: 121 GVAPLFTALRKLQVSTEHLTPLHSEFLLLCLLAKCYKTGLSILDDDVFEVDQPRDLFLYC 180
Query: 1107 YYGGMICIGQKHFRRAMELLHNVVTAPMSSSNAIAVEAHKKYILLSLIYVGQLSNVLPKY 928
YYGGMICIGQKHF++A++LLHNVVTAPMS+ NAIAVEA+KKYIL+SLI GQ S LPKY
Sbjct: 181 YYGGMICIGQKHFQKALDLLHNVVTAPMSTINAIAVEAYKKYILVSLIRHGQFSTSLPKY 240
Query: 927 ISPTGQRNLRNYCQPYYDLANSYKSGEISEVESSVTANREKFESDNNLGLVKQVVSSLSK 748
S T QRNL+N+CQPY +LANSY +G+I E+E+ AN EKFESDNNLGLV QVVSS+ K
Sbjct: 241 SSSTAQRNLKNFCQPYVELANSYGTGQIEELEAYARANAEKFESDNNLGLVNQVVSSMYK 300
Query: 747 RNIHRLTQTYLTLSLQDIANRVQLNTSKEAEMHVLQMIQDGEIFATINQKDGMVSFHEDP 568
RNI RLTQTYLTLSL DIA+ VQLN+ KEAEMHVLQMIQDGEI+ATINQKDGMV F EDP
Sbjct: 301 RNIQRLTQTYLTLSLHDIASTVQLNSPKEAEMHVLQMIQDGEIYATINQKDGMVRFLEDP 360
Query: 567 EQYKTCEMMEHIDSSIQRIISLSKKLSGVDELMSCDPSYLGKAGRERHRYEFDDFDSVPQ 388
EQYKTCEM+EHIDSSIQRI++LS+KL+ DE +SCD YL KAGRER RY+FDDFD VPQ
Sbjct: 361 EQYKTCEMIEHIDSSIQRIMALSRKLTATDEQISCDQLYLSKAGRERQRYDFDDFD-VPQ 419
Query: 387 RFNM 376
+FN+
Sbjct: 420 KFNI 423