BLASTX nr result
ID: Cimicifuga21_contig00012312
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012312
(609 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichoca... 165 5e-39
ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichoca... 137 1e-30
ref|XP_002307892.1| nbs-lrr resistance protein [Populus trichoca... 130 2e-28
gb|AAA63149.1| myosin heavy chain homolog, partial [Arabidopsis ... 126 3e-27
ref|NP_190664.1| disease resistance RPP13-like protein 4 [Arabid... 126 3e-27
>ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|105923264|gb|ABF81467.1| NBS-LRR type disease
resistance protein [Populus trichocarpa]
gi|222867522|gb|EEF04653.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 855
Score = 165 bits (418), Expect = 5e-39
Identities = 96/198 (48%), Positives = 135/198 (68%), Gaps = 2/198 (1%)
Frame = +1
Query: 22 LTTVDSLRVLDLSHNKLNSNCVEDLLSRIKSQKVLAYLNLHGVDSLTELPKWIKRRQNLK 201
+ ++DSLRVLDLS +L+S +E LLS I S + LAYLNL G L E+P I++ +NL
Sbjct: 557 MVSLDSLRVLDLSRIRLDSTSMEKLLSWIFSLQRLAYLNLSGAVGLKEMPSSIRKLRNLH 616
Query: 202 ILDLTECNNLESLHPSITLLQNLLVLDVGDCPSLQCLPRGLEKLSKLQVLSGFKLPAPRK 381
+L L EC++L LHPSI+ L+NL+VLD G C LQ LP+G+ LS+LQ LSGF++
Sbjct: 617 LLILAECSDLTKLHPSISYLKNLIVLDCGSC-GLQYLPQGIGNLSQLQELSGFRVVRQST 675
Query: 382 YDS-KLGDLKDLKELRVLRIRLTKKDKIADEELNFLSNLYQLKVLSIDTKDWEKKQV-SQ 555
S L +LK L +LRVLR+ L+ + +I + E LS L +L+VL+IDT+D + + +
Sbjct: 676 PQSCHLLELKQLVQLRVLRMNLSNESEITESEGELLSKLVKLRVLAIDTEDCKDRTILEM 735
Query: 556 LDKLSAPPNLQELYLKSY 609
LD+L PPNL+ELYL+ Y
Sbjct: 736 LDRLHPPPNLKELYLRRY 753
>ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222860619|gb|EEE98166.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 730
Score = 137 bits (346), Expect = 1e-30
Identities = 76/154 (49%), Positives = 116/154 (75%), Gaps = 2/154 (1%)
Frame = +1
Query: 154 SLTELPKWIKRRQNLKILDLTECNNLESLHPSITLLQNLLVLDVGDCPSLQCLPRGLEKL 333
+L ELP I + +NL++L L+ CNNL+ L SIT LQ L++LD+G CP +Q LP+G+ +L
Sbjct: 483 ALKELPFSIGKLRNLQLLVLSGCNNLQKLPLSITALQKLILLDIGHCP-IQYLPQGIGRL 541
Query: 334 SKLQVLSGFKLP-APRKYDSKLGDLKDLKELRVLRIRLTKKDKIADEELNFLSNLYQLKV 510
S LQ LSGFKL A K +L +L++L +LRVLR+ ++++ +IA+EEL L++L QLKV
Sbjct: 542 SNLQELSGFKLVGADNKDGCRLAELQNLLQLRVLRVNISEESEIAEEELTVLTHLKQLKV 601
Query: 511 LSIDTKDWEKKQVSQ-LDKLSAPPNLQELYLKSY 609
LSI+++ +K+++ Q L++LS PP+L+ELYL+ Y
Sbjct: 602 LSINSEGCDKEEIFQNLERLSPPPHLEELYLRHY 635
>ref|XP_002307892.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222853868|gb|EEE91415.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 851
Score = 130 bits (327), Expect = 2e-28
Identities = 86/194 (44%), Positives = 116/194 (59%), Gaps = 3/194 (1%)
Frame = +1
Query: 37 SLRVLDLSHNKLNSNCVEDLLSRIKSQKVLAYLNLHGVDSLTELPKWIKRRQNLKILDLT 216
SLRVLD S KL E+L+ I S K LAYLNL G+ L E+P ++ +NL+ L
Sbjct: 561 SLRVLDFSLTKLEKISTEELVEWISSLKRLAYLNLSGIVGLKEVPYSFRKLRNLQFLVFA 620
Query: 217 ECNNLESLHPSITLLQNLLVLDVGDCPSLQCLPRGLEKLSKLQVLSGFKLPAPRK--YDS 390
N+L + IT L+ L+VLD+G C LP G+E+LS LQ LSGFK+ + +
Sbjct: 621 GRNDLGKI-DQITSLKKLVVLDLGSC--FHYLPSGIERLSYLQELSGFKVASSSRSAASC 677
Query: 391 KLGDLKDLKELRVLRIRLTKKDKIADEELNFLSNLYQLKVLSIDTKDWEKKQVS-QLDKL 567
K DL+ L LRVLR+ + K +I + E L L +LKVL+ID +D E +S L+ L
Sbjct: 678 KFCDLEKLVHLRVLRMSIGKDSEITENEREVLLKLKKLKVLAIDAQDCEDNIISTMLNIL 737
Query: 568 SAPPNLQELYLKSY 609
S PP+LQELYL+ Y
Sbjct: 738 SPPPSLQELYLRRY 751
>gb|AAA63149.1| myosin heavy chain homolog, partial [Arabidopsis thaliana]
Length = 904
Score = 126 bits (317), Expect = 3e-27
Identities = 77/191 (40%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Frame = +1
Query: 40 LRVLDLSHNKLNSNCVEDLLSRIKSQKVLAYLNLHGVDSLTELPKWIKRRQNLKILDLTE 219
LRVLD+S + ++ + ++L I S + LA L+L L + P+ ++ NL+ILD +
Sbjct: 613 LRVLDISKSIFDAP-LSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASY 671
Query: 220 CNNLESLHPSITLLQNLLVLDVGDCPSLQCLPRGLEKLSKLQVLSGFKLPAPRKYDSKLG 399
C NL+ L P I L + LLVLD+ +C SL+C P+G+ L KL+VL GFK PA KL
Sbjct: 672 CQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFK-PARSNNGCKLS 730
Query: 400 DLKDLKELRVLRIRLTKKDKIADEELNFLSNLYQLKVLSIDTKD-WEKKQVSQLDKLSAP 576
++K+L LR L + LT+ D+I +EEL+ L NL +L +SI+ D + ++++D L+ P
Sbjct: 731 EVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKIDALTPP 790
Query: 577 PNLQELYLKSY 609
L EL L+ Y
Sbjct: 791 HQLHELSLQFY 801
>ref|NP_190664.1| disease resistance RPP13-like protein 4 [Arabidopsis thaliana]
gi|30693383|ref|NP_850677.1| disease resistance
RPP13-like protein 4 [Arabidopsis thaliana]
gi|29839509|sp|Q38834.2|R13L4_ARATH RecName: Full=Disease
resistance RPP13-like protein 4
gi|4835246|emb|CAB42924.1| putative disease resistance
protein [Arabidopsis thaliana]
gi|110742313|dbj|BAE99081.1| putative disease resistance
protein [Arabidopsis thaliana]
gi|332645209|gb|AEE78730.1| disease resistance RPP13-like
protein 4 [Arabidopsis thaliana]
gi|332645210|gb|AEE78731.1| disease resistance RPP13-like
protein 4 [Arabidopsis thaliana]
Length = 852
Score = 126 bits (317), Expect = 3e-27
Identities = 77/191 (40%), Positives = 118/191 (61%), Gaps = 1/191 (0%)
Frame = +1
Query: 40 LRVLDLSHNKLNSNCVEDLLSRIKSQKVLAYLNLHGVDSLTELPKWIKRRQNLKILDLTE 219
LRVLD+S + ++ + ++L I S + LA L+L L + P+ ++ NL+ILD +
Sbjct: 561 LRVLDISKSIFDAP-LSEILDEIASLQHLACLSLSNTHPLIQFPRSMEDLHNLQILDASY 619
Query: 220 CNNLESLHPSITLLQNLLVLDVGDCPSLQCLPRGLEKLSKLQVLSGFKLPAPRKYDSKLG 399
C NL+ L P I L + LLVLD+ +C SL+C P+G+ L KL+VL GFK PA KL
Sbjct: 620 CQNLKQLQPCIVLFKKLLVLDMTNCGSLECFPKGIGSLVKLEVLLGFK-PARSNNGCKLS 678
Query: 400 DLKDLKELRVLRIRLTKKDKIADEELNFLSNLYQLKVLSIDTKD-WEKKQVSQLDKLSAP 576
++K+L LR L + LT+ D+I +EEL+ L NL +L +SI+ D + ++++D L+ P
Sbjct: 679 EVKNLTNLRKLGLSLTRGDQIEEEELDSLINLSKLMSISINCYDSYGDDLITKIDALTPP 738
Query: 577 PNLQELYLKSY 609
L EL L+ Y
Sbjct: 739 HQLHELSLQFY 749