BLASTX nr result

ID: Cimicifuga21_contig00012310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012310
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23362.3| unnamed protein product [Vitis vinifera]              281   7e-74
ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   281   7e-74
ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|2...   268   4e-70
ref|XP_003628949.1| Protein TRANSPARENT TESTA [Medicago truncatu...   261   5e-68
ref|XP_002329229.1| predicted protein [Populus trichocarpa] gi|2...   261   5e-68

>emb|CBI23362.3| unnamed protein product [Vitis vinifera]
          Length = 1152

 Score =  281 bits (718), Expect = 7e-74
 Identities = 142/193 (73%), Positives = 167/193 (86%), Gaps = 1/193 (0%)
 Frame = +2

Query: 2    PLLLFREDEETSDQLLKHGGSSFGSSLIAD-GDIKPISRVNDFFREFLVESKKLWYLAGP 178
            PLL  R+D+ET ++      +S  ++  AD  DI PI+ V DF++EF+VESKKLWYLAGP
Sbjct: 650  PLLSARQDDETPNRT---AANSLLATFNADESDIGPINGVRDFYKEFIVESKKLWYLAGP 706

Query: 179  AIFTSICQYSLGATTQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQAF 358
            AIFTS+CQYSLGA TQVFAG VGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQAF
Sbjct: 707  AIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQAF 766

Query: 359  GAGQLDMLGIYMQRSWIILDVTALILTFIYIFSAPLLKLIGQEDSIAEAAGKFAIWMIPQ 538
            GAGQLDMLG+YMQRSW+IL  TA++L+F+YIFSA LLKLIGQ ++I++ AG FA+WM+PQ
Sbjct: 767  GAGQLDMLGVYMQRSWVILTSTAVLLSFLYIFSARLLKLIGQTEAISKEAGMFAVWMLPQ 826

Query: 539  LFAYAVNFPIAKF 577
            LFAYAVNFP+AKF
Sbjct: 827  LFAYAVNFPLAKF 839



 Score =  244 bits (624), Expect = 6e-63
 Identities = 126/194 (64%), Positives = 154/194 (79%), Gaps = 2/194 (1%)
 Frame = +2

Query: 2   PLLLFREDEETSDQLLKHGGSSFGSSLIA--DGDIKPISRVNDFFREFLVESKKLWYLAG 175
           PLL    D+E + Q  +   + F S L A  D D+ PI+ V DFFREF VESKKLW++AG
Sbjct: 36  PLLSTTHDQEQT-QNPRPAKTGFFSFLAANYDDDMDPINGVGDFFREFRVESKKLWHIAG 94

Query: 176 PAIFTSICQYSLGATTQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQA 355
           PAIFT +C+YSLGA TQVF G +G L+LAA +VENSVI+ FS G MLGMGSALETLCGQA
Sbjct: 95  PAIFTYLCRYSLGAITQVFVGHIGALQLAAFAVENSVISMFSLGTMLGMGSALETLCGQA 154

Query: 356 FGAGQLDMLGIYMQRSWIILDVTALILTFIYIFSAPLLKLIGQEDSIAEAAGKFAIWMIP 535
           FGAGQLDMLG+YMQRSWIIL  TAL L+ IYIF+  +LKLIG+ + I++AAG FA+WM+P
Sbjct: 155 FGAGQLDMLGVYMQRSWIILVTTALPLSLIYIFAEQILKLIGETEEISKAAGVFALWMLP 214

Query: 536 QLFAYAVNFPIAKF 577
           QLF+YA++FPI+KF
Sbjct: 215 QLFSYALSFPISKF 228


>ref|XP_002272174.1| PREDICTED: protein TRANSPARENT TESTA 12-like [Vitis vinifera]
          Length = 544

 Score =  281 bits (718), Expect = 7e-74
 Identities = 142/193 (73%), Positives = 167/193 (86%), Gaps = 1/193 (0%)
 Frame = +2

Query: 2   PLLLFREDEETSDQLLKHGGSSFGSSLIAD-GDIKPISRVNDFFREFLVESKKLWYLAGP 178
           PLL  R+D+ET ++      +S  ++  AD  DI PI+ V DF++EF+VESKKLWYLAGP
Sbjct: 42  PLLSARQDDETPNRT---AANSLLATFNADESDIGPINGVRDFYKEFIVESKKLWYLAGP 98

Query: 179 AIFTSICQYSLGATTQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQAF 358
           AIFTS+CQYSLGA TQVFAG VGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQAF
Sbjct: 99  AIFTSLCQYSLGAITQVFAGHVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQAF 158

Query: 359 GAGQLDMLGIYMQRSWIILDVTALILTFIYIFSAPLLKLIGQEDSIAEAAGKFAIWMIPQ 538
           GAGQLDMLG+YMQRSW+IL  TA++L+F+YIFSA LLKLIGQ ++I++ AG FA+WM+PQ
Sbjct: 159 GAGQLDMLGVYMQRSWVILTSTAVLLSFLYIFSARLLKLIGQTEAISKEAGMFAVWMLPQ 218

Query: 539 LFAYAVNFPIAKF 577
           LFAYAVNFP+AKF
Sbjct: 219 LFAYAVNFPLAKF 231


>ref|XP_002333719.1| predicted protein [Populus trichocarpa] gi|222837995|gb|EEE76360.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  268 bits (686), Expect = 4e-70
 Identities = 136/193 (70%), Positives = 157/193 (81%), Gaps = 1/193 (0%)
 Frame = +2

Query: 2   PLLLFREDEETSDQLLKHGGSSFGSSLIADGDIKP-ISRVNDFFREFLVESKKLWYLAGP 178
           PLL  + D +  DQ L+   SS  SS   D D  P I+ V DF  EF  ESKKLWYLAGP
Sbjct: 7   PLLSPQNDHQNRDQHLRSTNSSIASSFTPDPDDIPLINSVRDFSIEFCRESKKLWYLAGP 66

Query: 179 AIFTSICQYSLGATTQVFAGQVGTLELAAVSVENSVIAGFSFGVMLGMGSALETLCGQAF 358
           AIFT++CQYSLGA TQ+ AG VGTL+LAAVSVENSVIAGFSFG+MLGMGSALETLCGQA+
Sbjct: 67  AIFTTLCQYSLGAITQLLAGHVGTLDLAAVSVENSVIAGFSFGIMLGMGSALETLCGQAY 126

Query: 359 GAGQLDMLGIYMQRSWIILDVTALILTFIYIFSAPLLKLIGQEDSIAEAAGKFAIWMIPQ 538
           GAGQLDMLG+YMQRSW+IL+ TA+ILT +YIF+ P LKLIGQ   I++AAG F++WMIPQ
Sbjct: 127 GAGQLDMLGLYMQRSWVILNATAVILTLLYIFAGPFLKLIGQTAEISQAAGMFSVWMIPQ 186

Query: 539 LFAYAVNFPIAKF 577
           LFAYA+NFPIAKF
Sbjct: 187 LFAYAMNFPIAKF 199


>ref|XP_003628949.1| Protein TRANSPARENT TESTA [Medicago truncatula]
           gi|355522971|gb|AET03425.1| Protein TRANSPARENT TESTA
           [Medicago truncatula]
          Length = 512

 Score =  261 bits (668), Expect = 5e-68
 Identities = 129/161 (80%), Positives = 144/161 (89%)
 Frame = +2

Query: 95  DIKPISRVNDFFREFLVESKKLWYLAGPAIFTSICQYSLGATTQVFAGQVGTLELAAVSV 274
           DI PI+   DF REFL ESKKLWYLAGPAIFTSI QYSLGA TQVFAGQVGTL+LAAVSV
Sbjct: 34  DISPITGAGDFAREFLNESKKLWYLAGPAIFTSISQYSLGAVTQVFAGQVGTLQLAAVSV 93

Query: 275 ENSVIAGFSFGVMLGMGSALETLCGQAFGAGQLDMLGIYMQRSWIILDVTALILTFIYIF 454
           ENSVIAGF  G+ +GMGSALETLCGQAFGAG+LDMLGIYMQRSW+IL+ TA+IL F+YIF
Sbjct: 94  ENSVIAGFCLGITMGMGSALETLCGQAFGAGKLDMLGIYMQRSWLILNATAIILCFLYIF 153

Query: 455 SAPLLKLIGQEDSIAEAAGKFAIWMIPQLFAYAVNFPIAKF 577
           ++PLLKLIGQ  +I+EAAG FA+WMIPQLFAYA+NFPI KF
Sbjct: 154 ASPLLKLIGQTTAISEAAGVFALWMIPQLFAYAMNFPIQKF 194


>ref|XP_002329229.1| predicted protein [Populus trichocarpa] gi|222871010|gb|EEF08141.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  261 bits (668), Expect = 5e-68
 Identities = 128/161 (79%), Positives = 145/161 (90%)
 Frame = +2

Query: 95  DIKPISRVNDFFREFLVESKKLWYLAGPAIFTSICQYSLGATTQVFAGQVGTLELAAVSV 274
           DI+PI+ V DFFREF  ES KLW+LA PAIFT++CQYSLGA TQVFAG VGTL LAAVS+
Sbjct: 2   DIQPINSVRDFFREFCRESVKLWFLAAPAIFTTVCQYSLGAITQVFAGHVGTLALAAVSI 61

Query: 275 ENSVIAGFSFGVMLGMGSALETLCGQAFGAGQLDMLGIYMQRSWIILDVTALILTFIYIF 454
           ENSVIAGFSFG+MLGMGSALETLCGQAFGAGQLDMLGIYMQRSW+IL+ TAL+L+ +YIF
Sbjct: 62  ENSVIAGFSFGLMLGMGSALETLCGQAFGAGQLDMLGIYMQRSWLILNTTALLLSLVYIF 121

Query: 455 SAPLLKLIGQEDSIAEAAGKFAIWMIPQLFAYAVNFPIAKF 577
           SA LLKLIGQ  SI++AAG F+IWM+PQLFAYA NFP+AKF
Sbjct: 122 SAQLLKLIGQTASISKAAGMFSIWMLPQLFAYAFNFPMAKF 162


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