BLASTX nr result

ID: Cimicifuga21_contig00012279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012279
         (1636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus c...   123   1e-25
gb|ABR16442.1| unknown [Picea sitchensis]                             120   8e-25
ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257...   119   2e-24
emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]   119   2e-24
ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-22

>ref|XP_002518498.1| hypothetical protein RCOM_0905070 [Ricinus communis]
            gi|223542343|gb|EEF43885.1| hypothetical protein
            RCOM_0905070 [Ricinus communis]
          Length = 491

 Score =  123 bits (309), Expect = 1e-25
 Identities = 73/155 (47%), Positives = 102/155 (65%), Gaps = 6/155 (3%)
 Frame = -3

Query: 1439 MTQENQGTSFAVPDNLLPVKRKRGRPRKDRSQTPGGHVSSAATPTPVTEMKNQRRRIDPP 1260
            M  ++QGTS + P +  P+KRKRGRPRKD S   G ++ + ATP+  +  KN++      
Sbjct: 1    MNPQSQGTSSSSPADP-PLKRKRGRPRKDESMVQGENMPATATPSADSLKKNKQSVGTAG 59

Query: 1259 AVTNKKSDMVGQAVFGVLDGSFDAGYLLTVRVGDTDTILKGVVFQPGSSVPISGSNDVAP 1080
            AV++   +MVG+ V GV++GSFDAGYLL V+VGDT+T L+GVVF PG   PI+ SNDVAP
Sbjct: 60   AVSD---EMVGKVVSGVIEGSFDAGYLLKVKVGDTETHLRGVVFLPGRFTPITASNDVAP 116

Query: 1079 QIKMLKRAAEIHVDLPTT------HVPTSKEAANQ 993
            + KM +R  E+ + +PT        VP+S+E   Q
Sbjct: 117  EAKMYRR-TEMPIPVPTRPSQVPGPVPSSEERDKQ 150


>gb|ABR16442.1| unknown [Picea sitchensis]
          Length = 305

 Score =  120 bits (302), Expect = 8e-25
 Identities = 92/248 (37%), Positives = 118/248 (47%), Gaps = 9/248 (3%)
 Frame = -3

Query: 1439 MTQENQGTSFAVPDNLLPVKRKRGRPRKDRSQTPGGHVSSAATPTPVTEMKNQRRR-IDP 1263
            M  ENQ       D  +P KRKRGRPRK     PG     A  P  +   K  RR+ ID 
Sbjct: 1    MKDENQEAQTDSTD--IPPKRKRGRPRKQHLLYPG---EKAHVPQRLDGKKKPRRKKIDS 55

Query: 1262 PAVTNKKSDMVGQAVFGVLDGSFDAGYLLTVRVGDTDTILKGVVFQPGSSVPISGSNDVA 1083
               +   +  VGQ+V GVLDGSFDAGYLL VRVGDTDT+L+GVVF PG SVPIS +ND+A
Sbjct: 56   SMPSFPDNTFVGQSVHGVLDGSFDAGYLLMVRVGDTDTVLRGVVFDPGMSVPISKANDIA 115

Query: 1082 PQIKMLKRAAEIHVDLPTTHVPTSKEAANQVPPIVPPQSSTSQPQITNDNFVTEAAASNV 903
            P + + +R   I   L +  +P S +    +P    P   T  P + N    T     + 
Sbjct: 116  PNVNLTRRDENI---LLSPELPPSIQNTVAMPSTPIPLLPTMVP-VVNSQGTTSVPIPDQ 171

Query: 902  EDEDKTKNSAEEDVGKSLPNNILPK---DTIGQADTPVRPE-----SELKNTDFATDGET 747
                    S +  V    PN  LPK   D   Q +    P+     S L+  +    G  
Sbjct: 172  TARPVQVGSNQTRVVLGQPNGSLPKSVPDHSSQINKEPAPKPGESFSYLQQPNPIPTGAV 231

Query: 746  TRQETMAP 723
            +RQ+   P
Sbjct: 232  SRQQQPIP 239


>ref|XP_002278340.1| PREDICTED: uncharacterized protein LOC100257339 [Vitis vinifera]
            gi|297737428|emb|CBI26629.3| unnamed protein product
            [Vitis vinifera]
          Length = 414

 Score =  119 bits (299), Expect = 2e-24
 Identities = 71/133 (53%), Positives = 89/133 (66%)
 Frame = -3

Query: 1439 MTQENQGTSFAVPDNLLPVKRKRGRPRKDRSQTPGGHVSSAATPTPVTEMKNQRRRIDPP 1260
            M + NQG++   P N  PVKRKRGRPRKD+S+  G +      P       N   +++P 
Sbjct: 1    MNEANQGSNPDFPGNF-PVKRKRGRPRKDQSKKRGENAH--IPPGFEGADANLPLQVEPI 57

Query: 1259 AVTNKKSDMVGQAVFGVLDGSFDAGYLLTVRVGDTDTILKGVVFQPGSSVPISGSNDVAP 1080
             V N    MVGQ V GV+D SFDAGYLLTVRVG++DTILKGVVF+PG  VPIS  NDVAP
Sbjct: 58   NVVNDA--MVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAP 115

Query: 1079 QIKMLKRAAEIHV 1041
             ++M++R  EIH+
Sbjct: 116  HVQMIRR-NEIHL 127


>emb|CAN82077.1| hypothetical protein VITISV_016663 [Vitis vinifera]
          Length = 479

 Score =  119 bits (299), Expect = 2e-24
 Identities = 71/133 (53%), Positives = 89/133 (66%)
 Frame = -3

Query: 1439 MTQENQGTSFAVPDNLLPVKRKRGRPRKDRSQTPGGHVSSAATPTPVTEMKNQRRRIDPP 1260
            M + NQG++   P N  PVKRKRGRPRKD+S+  G +      P       N   +++P 
Sbjct: 1    MNEANQGSNPDFPGNF-PVKRKRGRPRKDQSKKRGENAH--IPPGFEGADANLPLQVEPI 57

Query: 1259 AVTNKKSDMVGQAVFGVLDGSFDAGYLLTVRVGDTDTILKGVVFQPGSSVPISGSNDVAP 1080
             V N    MVGQ V GV+D SFDAGYLLTVRVG++DTILKGVVF+PG  VPIS  NDVAP
Sbjct: 58   NVVNDA--MVGQVVSGVVDASFDAGYLLTVRVGNSDTILKGVVFKPGRYVPISSENDVAP 115

Query: 1079 QIKMLKRAAEIHV 1041
             ++M++R  EIH+
Sbjct: 116  HVQMIRR-NEIHL 127


>ref|XP_002319845.1| predicted protein [Populus trichocarpa] gi|222858221|gb|EEE95768.1|
            predicted protein [Populus trichocarpa]
          Length = 328

 Score =  112 bits (279), Expect = 4e-22
 Identities = 67/173 (38%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
 Frame = -3

Query: 1439 MTQENQGTSFAVPDN--LLPVKRKRGRPRKDRSQTPGGHVSSAATPTPVTEMKNQRRRID 1266
            M++ NQG +   PD   ++P+KR+RGRPRK     P   V   A   P   + N  +   
Sbjct: 1    MSEANQGNN---PDASAIVPLKRRRGRPRK----YPKMEVDHNAHAPPGFGVVNSNQPHQ 53

Query: 1265 PPAVTNKKSDMVGQAVFGVLDGSFDAGYLLTVRVGDTDTILKGVVFQPGSSVPISGSNDV 1086
               V N    M+GQ+V+GV++ +FDAGYLL VRVGDT+T L+GVVF+PG  +P++  ND+
Sbjct: 54   VGPVNNAIDAMIGQSVYGVIEATFDAGYLLNVRVGDTETTLRGVVFKPGHYIPVNPENDI 113

Query: 1085 APQIKMLKRAAEIHVDLPTTHVPTSKEAANQVPPIVPPQSSTSQPQITNDNFV 927
            AP + M++R            +P ++E+ NQV  +VP       P I+  N V
Sbjct: 114  APDVPMIRR----------NEIPLTRESNNQVLSVVP-----QTPPISRGNVV 151


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