BLASTX nr result

ID: Cimicifuga21_contig00012275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012275
         (1779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513413.1| ribonucleic acid binding protein S1, putativ...   206   2e-50
ref|XP_002268483.1| PREDICTED: uncharacterized protein LOC100267...   201   7e-49
ref|XP_002317618.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-48
gb|ABK95271.1| unknown [Populus trichocarpa]                          200   1e-48
ref|XP_003531499.1| PREDICTED: uncharacterized protein LOC100804...   194   8e-47

>ref|XP_002513413.1| ribonucleic acid binding protein S1, putative [Ricinus communis]
           gi|223547321|gb|EEF48816.1| ribonucleic acid binding
           protein S1, putative [Ricinus communis]
          Length = 423

 Score =  206 bits (524), Expect = 2e-50
 Identities = 105/151 (69%), Positives = 117/151 (77%)
 Frame = +3

Query: 285 AKRGRSPASTKRASXXXXXXXXXRKTSPVLESVVLHIDQLTRNVNEGHLKEIFSNFGEVV 464
           A+RGRSP    R +         RK SP  ES+VLHID L+RNVNEGHLKEIFSNFGE++
Sbjct: 83  ARRGRSPPPQSRKASPPP-----RKASPTRESLVLHIDSLSRNVNEGHLKEIFSNFGEII 137

Query: 465 NVELTMDRSVNLPRGFGYVEFKTRTDAEKALLYMDGAQIDGSVVRARFTLPPRQKGLSDS 644
           +VEL MDRSVNLP+G+GYVEFKTRTDAEKALLYMDGAQIDG+VVRARFTLPPRQK     
Sbjct: 138 HVELAMDRSVNLPKGYGYVEFKTRTDAEKALLYMDGAQIDGNVVRARFTLPPRQKVSPPP 197

Query: 645 KAVPAASKREVPPKDNVGADTEKDGQPRQKE 737
           K + AA KR+ P  DN GAD EKDG  RQKE
Sbjct: 198 KPIAAAPKRDAPKTDNAGADVEKDGPKRQKE 228


>ref|XP_002268483.1| PREDICTED: uncharacterized protein LOC100267894 [Vitis vinifera]
           gi|296082773|emb|CBI21778.3| unnamed protein product
           [Vitis vinifera]
          Length = 420

 Score =  201 bits (510), Expect = 7e-49
 Identities = 107/152 (70%), Positives = 120/152 (78%), Gaps = 1/152 (0%)
 Frame = +3

Query: 285 AKRGRSPA-STKRASXXXXXXXXXRKTSPVLESVVLHIDQLTRNVNEGHLKEIFSNFGEV 461
           AKRGRSP   +KR S         RK SP+ ES+VLHI  L+RNVNEGHLKEIFSNFGEV
Sbjct: 75  AKRGRSPPPQSKRTSPPP------RKVSPIRESLVLHIGSLSRNVNEGHLKEIFSNFGEV 128

Query: 462 VNVELTMDRSVNLPRGFGYVEFKTRTDAEKALLYMDGAQIDGSVVRARFTLPPRQKGLSD 641
           V+VEL MDR+VNLP+G+GYVEFKTR+DAEKA LYMDGAQIDG+VVRA+FTLP RQK  S 
Sbjct: 129 VHVELAMDRTVNLPKGYGYVEFKTRSDAEKAQLYMDGAQIDGNVVRAKFTLPQRQKISSP 188

Query: 642 SKAVPAASKREVPPKDNVGADTEKDGQPRQKE 737
            KAV  ASKR+ P  DNVGAD EKDG  RQ+E
Sbjct: 189 PKAVATASKRDGPKTDNVGADVEKDGPKRQRE 220


>ref|XP_002317618.1| predicted protein [Populus trichocarpa] gi|222860683|gb|EEE98230.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  200 bits (508), Expect = 1e-48
 Identities = 103/152 (67%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
 Frame = +3

Query: 285 AKRGRSPA-STKRASXXXXXXXXXRKTSPVLESVVLHIDQLTRNVNEGHLKEIFSNFGEV 461
           A+RGRSP   +K+ S         RK SP+ ES+VLH+D LTRNVNEGHL+EIFSNFGEV
Sbjct: 79  ARRGRSPPPQSKKVSPPP------RKASPIRESLVLHVDSLTRNVNEGHLREIFSNFGEV 132

Query: 462 VNVELTMDRSVNLPRGFGYVEFKTRTDAEKALLYMDGAQIDGSVVRARFTLPPRQKGLSD 641
           V+VEL MDR+VNLP+GFGYVEFKTR DAEKALLYMDGAQIDG+VVRA+FTLPPRQK    
Sbjct: 133 VHVELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNVVRAKFTLPPRQKLSPP 192

Query: 642 SKAVPAASKREVPPKDNVGADTEKDGQPRQKE 737
            K + AA KR+ P  DN  AD EKDG  RQ+E
Sbjct: 193 PKPIAAAPKRDAPKTDNASADAEKDGPKRQRE 224


>gb|ABK95271.1| unknown [Populus trichocarpa]
          Length = 418

 Score =  200 bits (508), Expect = 1e-48
 Identities = 103/152 (67%), Positives = 118/152 (77%), Gaps = 1/152 (0%)
 Frame = +3

Query: 285 AKRGRSPA-STKRASXXXXXXXXXRKTSPVLESVVLHIDQLTRNVNEGHLKEIFSNFGEV 461
           A+RGRSP   +K+ S         RK SP+ ES+VLH+D LTRNVNEGHL+EIFSNFGEV
Sbjct: 79  ARRGRSPPPQSKKVSPPP------RKASPIRESLVLHVDSLTRNVNEGHLREIFSNFGEV 132

Query: 462 VNVELTMDRSVNLPRGFGYVEFKTRTDAEKALLYMDGAQIDGSVVRARFTLPPRQKGLSD 641
           V+VEL MDR+VNLP+GFGYVEFKTR DAEKALLYMDGAQIDG+VVRA+FTLPPRQK    
Sbjct: 133 VHVELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNVVRAKFTLPPRQKLSPP 192

Query: 642 SKAVPAASKREVPPKDNVGADTEKDGQPRQKE 737
            K + AA KR+ P  DN  AD EKDG  RQ+E
Sbjct: 193 PKPIAAAPKRDAPKTDNASADAEKDGPKRQRE 224


>ref|XP_003531499.1| PREDICTED: uncharacterized protein LOC100804778 [Glycine max]
          Length = 422

 Score =  194 bits (492), Expect = 8e-47
 Identities = 99/152 (65%), Positives = 119/152 (78%), Gaps = 1/152 (0%)
 Frame = +3

Query: 285 AKRGRSPA-STKRASXXXXXXXXXRKTSPVLESVVLHIDQLTRNVNEGHLKEIFSNFGEV 461
           A+RGRSP   +KRAS         RK SPV ES+VLH+++L+RNVNEGHLKEIFSNFGEV
Sbjct: 77  ARRGRSPPPQSKRASPPP------RKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEV 130

Query: 462 VNVELTMDRSVNLPRGFGYVEFKTRTDAEKALLYMDGAQIDGSVVRARFTLPPRQKGLSD 641
           ++VEL MDR+VNLP+G+GYV+FKTR +AEKALLYMDGAQIDG+V++ARFTLPPRQK    
Sbjct: 131 ISVELAMDRTVNLPKGYGYVQFKTRGEAEKALLYMDGAQIDGNVIKARFTLPPRQKVSPP 190

Query: 642 SKAVPAASKREVPPKDNVGADTEKDGQPRQKE 737
            K    A KRE+P  DN  AD +KDG  RQ+E
Sbjct: 191 PKTSAVAPKREIPRTDNASADVDKDGPKRQRE 222


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