BLASTX nr result
ID: Cimicifuga21_contig00012248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012248
(1963 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinif... 644 0.0
emb|CBI25610.3| unnamed protein product [Vitis vinifera] 644 0.0
ref|XP_002308384.1| dicer-like protein [Populus trichocarpa] gi|... 615 e-173
ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis... 609 e-172
gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum] 598 e-168
>ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 644 bits (1660), Expect = 0.0
Identities = 328/487 (67%), Positives = 395/487 (81%), Gaps = 2/487 (0%)
Frame = -2
Query: 1476 PRIRARKYQLELCKKAVEENIIVYLGTGYGKTHIAVLLIYELGHLIKKPQKNVCVFLAPT 1297
PR AR YQLELCKKA+EENIIVY+GTG GKTHIAVLLI+ LGHLI+KPQKN+CVFLAPT
Sbjct: 43 PRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICVFLAPT 102
Query: 1296 VPLVRQQASVIEEFTDFRVGIYYGHSKRIRNHQEWEKEIEEYEVLVMTPQILLHNLLHRL 1117
V LV+QQA VIEE DF+VG Y G+S+R+R H +WEKE E+YEV VMTPQILL L H
Sbjct: 103 VALVQQQARVIEESIDFKVGTYCGNSRRLRTHHDWEKEFEQYEVFVMTPQILLRGLYHCF 162
Query: 1116 IKMELIALLIFDECHHAQAQSSHPYAQIMKE-YKTNTTKRPRIFGMTASPIVGKGGASPD 940
I+MELIALLIFDECHHAQ QS+HPYA+IMK YKT++T+ PRIFGMTASP+VGKG +
Sbjct: 163 IRMELIALLIFDECHHAQVQSNHPYAEIMKVFYKTSSTRLPRIFGMTASPVVGKGASDQA 222
Query: 939 DLPRGINSLEELLDAKVYSVEDNDELERFVASPKLKFYFYGRIGDCTVTKAFLGKLEEIK 760
+LP+ INSLE LL AKVYSVE+ ELERFVASPK+ Y Y D +T + KLEEIK
Sbjct: 223 NLPKCINSLENLLHAKVYSVENQQELERFVASPKINVYCYHP--DINMTSSTCKKLEEIK 280
Query: 759 NQCIETLSRTTDDVKVLRSNMKVLQRLQDSLLFCLESLGLWGAVQAVRILLSGDQSELTD 580
+QC+ +L R +D K LRS K+LQR+ D+L+F +E+LGLWGA+QA RILLSGD +E +
Sbjct: 281 SQCVLSLRRNVEDHKSLRSTKKLLQRMHDNLIFSMENLGLWGALQASRILLSGDHAERNE 340
Query: 579 LIDTEGGSTDN-LANQYLSLAALVVDPDSIKDGVGFDSSILDALNDPIFSKKLLVLIQIL 403
L++ EG ++D+ L ++YL +A V+ + I+DG+G D S +D L +P FS+KLL LI IL
Sbjct: 341 LMEAEGSASDDRLCDKYLDQSANVLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGIL 400
Query: 402 STCRIQPDMKCIIFVNRVVVARTLSYILRNLKCLPFWKCHFLVGFHSGLKNMSRKNMNSI 223
ST R QP+MKCIIFVNR+V AR+L+YIL+NLK L +WKC FLVG HSGLK+MSRK MN I
Sbjct: 401 STFRRQPNMKCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNII 460
Query: 222 VEKFRSGELNLLVATRVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMPQSEYAFLV 43
++KFRS ELNLLVAT+VGEEGLDIQTCCLV+RFDLPETVASFIQSRGRARMPQSEYAFLV
Sbjct: 461 LDKFRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 520
Query: 42 ERRRPNE 22
+ + E
Sbjct: 521 DSGKQKE 527
>emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 644 bits (1660), Expect = 0.0
Identities = 328/487 (67%), Positives = 395/487 (81%), Gaps = 2/487 (0%)
Frame = -2
Query: 1476 PRIRARKYQLELCKKAVEENIIVYLGTGYGKTHIAVLLIYELGHLIKKPQKNVCVFLAPT 1297
PR AR YQLELCKKA+EENIIVY+GTG GKTHIAVLLI+ LGHLI+KPQKN+CVFLAPT
Sbjct: 43 PRTIARGYQLELCKKALEENIIVYMGTGCGKTHIAVLLIHALGHLIRKPQKNICVFLAPT 102
Query: 1296 VPLVRQQASVIEEFTDFRVGIYYGHSKRIRNHQEWEKEIEEYEVLVMTPQILLHNLLHRL 1117
V LV+QQA VIEE DF+VG Y G+S+R+R H +WEKE E+YEV VMTPQILL L H
Sbjct: 103 VALVQQQARVIEESIDFKVGTYCGNSRRLRTHHDWEKEFEQYEVFVMTPQILLRGLYHCF 162
Query: 1116 IKMELIALLIFDECHHAQAQSSHPYAQIMKE-YKTNTTKRPRIFGMTASPIVGKGGASPD 940
I+MELIALLIFDECHHAQ QS+HPYA+IMK YKT++T+ PRIFGMTASP+VGKG +
Sbjct: 163 IRMELIALLIFDECHHAQVQSNHPYAEIMKVFYKTSSTRLPRIFGMTASPVVGKGASDQA 222
Query: 939 DLPRGINSLEELLDAKVYSVEDNDELERFVASPKLKFYFYGRIGDCTVTKAFLGKLEEIK 760
+LP+ INSLE LL AKVYSVE+ ELERFVASPK+ Y Y D +T + KLEEIK
Sbjct: 223 NLPKCINSLENLLHAKVYSVENQQELERFVASPKINVYCYHP--DINMTSSTCKKLEEIK 280
Query: 759 NQCIETLSRTTDDVKVLRSNMKVLQRLQDSLLFCLESLGLWGAVQAVRILLSGDQSELTD 580
+QC+ +L R +D K LRS K+LQR+ D+L+F +E+LGLWGA+QA RILLSGD +E +
Sbjct: 281 SQCVLSLRRNVEDHKSLRSTKKLLQRMHDNLIFSMENLGLWGALQASRILLSGDHAERNE 340
Query: 579 LIDTEGGSTDN-LANQYLSLAALVVDPDSIKDGVGFDSSILDALNDPIFSKKLLVLIQIL 403
L++ EG ++D+ L ++YL +A V+ + I+DG+G D S +D L +P FS+KLL LI IL
Sbjct: 341 LMEAEGSASDDRLCDKYLDQSANVLASECIQDGIGSDISYVDVLKEPFFSRKLLRLIGIL 400
Query: 402 STCRIQPDMKCIIFVNRVVVARTLSYILRNLKCLPFWKCHFLVGFHSGLKNMSRKNMNSI 223
ST R QP+MKCIIFVNR+V AR+L+YIL+NLK L +WKC FLVG HSGLK+MSRK MN I
Sbjct: 401 STFRRQPNMKCIIFVNRIVTARSLAYILQNLKFLSYWKCDFLVGVHSGLKSMSRKTMNII 460
Query: 222 VEKFRSGELNLLVATRVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMPQSEYAFLV 43
++KFRS ELNLLVAT+VGEEGLDIQTCCLV+RFDLPETVASFIQSRGRARMPQSEYAFLV
Sbjct: 461 LDKFRSNELNLLVATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLV 520
Query: 42 ERRRPNE 22
+ + E
Sbjct: 521 DSGKQKE 527
>ref|XP_002308384.1| dicer-like protein [Populus trichocarpa] gi|222854360|gb|EEE91907.1|
dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 615 bits (1587), Expect = e-173
Identities = 321/507 (63%), Positives = 390/507 (76%), Gaps = 21/507 (4%)
Frame = -2
Query: 1476 PRIRARKYQLELCKKAVEENIIVYLGTGYGKTHIAVLLIYELGHLIKKPQKNVCVFLAPT 1297
PR ARKYQLELCKKA+EENIIVYLGTG GKTHIAVLLIYE+GHLI++PQK+ CVFLAPT
Sbjct: 45 PRKMARKYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYEMGHLIRQPQKSACVFLAPT 104
Query: 1296 VPLVRQQASVIEEFTDFRVGIYYGHSKRIRNHQEWEKEIEEYEVLVMTPQILLHNLLHRL 1117
V LV QQA VIE+ TDF+VGIY G S R++ H WEKEIE+ EVLVMTPQILL+NL H
Sbjct: 105 VALVHQQAKVIEDSTDFKVGIYCGKSNRLKTHSSWEKEIEQNEVLVMTPQILLYNLSHSF 164
Query: 1116 IKMELIALLIFDECHHAQAQSSHPYAQIMKE-YKTNTTKRPRIFGMTASPIVGKGGASP- 943
IKM+LIALLIFDECHHAQ +S HPYAQIMK YK N K PRIFGMTASP+VGK
Sbjct: 165 IKMDLIALLIFDECHHAQVKSGHPYAQIMKVFYKNNDGKLPRIFGMTASPVVGKEKYRER 224
Query: 942 -------------DDLPRGINSLEELLDAKVYSVEDNDELERFVASPKLKFYFYGRIGDC 802
++LPR INSLE LLDAKVYSVED +ELE FVASP ++ Y YG + +
Sbjct: 225 VTSLEILLHHLIRENLPRSINSLENLLDAKVYSVEDKEELECFVASPVIRVYLYGPVANG 284
Query: 801 TVT--KAFLGKLEEIKNQCIETLSRTTD---DVKVLRSNMKVLQRLQDSLLFCLESLGLW 637
T + +A+ LE +K QCI + + TD ++ LRS ++L R+ ++++FCLE+LGLW
Sbjct: 285 TSSSYEAYYNILEGVKRQCIVEIGKKTDGNQSLESLRSTKRMLIRMHENIIFCLENLGLW 344
Query: 636 GAVQAVRILLSGDQSELTDLIDTEGGSTD-NLANQYLSLAALVVDPDSIKDGVGFDSSIL 460
GA+QA RILLSGD SE LI+ EG ++D ++ ++YL+ A V D +DGV + S +
Sbjct: 345 GALQACRILLSGDHSEWNALIEAEGNTSDVSMCDRYLNQATNVFAADCTRDGVTSNVSQV 404
Query: 459 DALNDPIFSKKLLVLIQILSTCRIQPDMKCIIFVNRVVVARTLSYILRNLKCLPFWKCHF 280
+ L +P FS+KLL LI+ILS R+QPDMKCI+FVNR+V AR+LS+IL+NLK L WKC F
Sbjct: 405 EVLKEPFFSRKLLRLIEILSNFRLQPDMKCIVFVNRIVTARSLSHILQNLKFLTSWKCDF 464
Query: 279 LVGFHSGLKNMSRKNMNSIVEKFRSGELNLLVATRVGEEGLDIQTCCLVVRFDLPETVAS 100
LVG HSGLK+MSRK MN I+E+FR+G+LNLL+AT+VGEEGLDIQTCCLV+RFDLPETVAS
Sbjct: 465 LVGVHSGLKSMSRKTMNVILERFRTGKLNLLLATKVGEEGLDIQTCCLVIRFDLPETVAS 524
Query: 99 FIQSRGRARMPQSEYAFLVERRRPNEQ 19
FIQSRGRARMPQSEY FLV+ E+
Sbjct: 525 FIQSRGRARMPQSEYVFLVDSGNQKER 551
>ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative
[Ricinus communis]
Length = 1633
Score = 609 bits (1570), Expect = e-172
Identities = 317/491 (64%), Positives = 383/491 (78%), Gaps = 6/491 (1%)
Frame = -2
Query: 1476 PRIRARKYQLELCKKAVEENIIVYLGTGYGKTHIAVLLIYELGHLIKKPQKNVCVFLAPT 1297
PR ARKYQLELCKKA+EENIIVYLGTG GKTHIAVLLIYELGHLI+KP KNVCVFLAPT
Sbjct: 42 PRKIARKYQLELCKKALEENIIVYLGTGCGKTHIAVLLIYELGHLIRKPLKNVCVFLAPT 101
Query: 1296 VPLVRQQASVIEEFTDFRVGIYYGHSKRIRNHQEWEKEIEEYEVLVMTPQILLHNLLHRL 1117
V LV QQ VIE+ DF+VG+Y G+S +++H++WEKEIE+ EVLVMTPQILLH L H
Sbjct: 102 VALV-QQVRVIEQSIDFKVGVYCGNSNHLKSHRDWEKEIEQNEVLVMTPQILLHTLGHSF 160
Query: 1116 IKMELIALLIFDECHHAQAQSSHPYAQIMKE-YKTNTTKRPRIFGMTASPIVGKGGASPD 940
IKMELI+LLIFDECHHAQ QSSHPYA+IMK YKT K PRIFGMTASP+VGKG ++
Sbjct: 161 IKMELISLLIFDECHHAQVQSSHPYAEIMKVFYKTGDGKFPRIFGMTASPVVGKGASNQA 220
Query: 939 DLPRGINSLEELLDAKVYSVEDNDELERFVASPKLKFYFYGRIGD--CTVTKAFLGKLEE 766
+LP+ INSLE LLDAKVYSVEDN+ELE FVASP ++ Y Y + + + + KLEE
Sbjct: 221 NLPKSINSLENLLDAKVYSVEDNEELELFVASPVVRIYLYAPVANEKSSSYMTYFSKLEE 280
Query: 765 IKNQCIETLSRTTDDVKVL---RSNMKVLQRLQDSLLFCLESLGLWGAVQAVRILLSGDQ 595
IK +C+ L + D + L ++ KV R+ D+++FCLE+LG WGA+QA +ILLS D
Sbjct: 281 IKRKCLLELHKKADSCQSLHGLQNAKKVFIRMHDNVVFCLENLGFWGALQACKILLSDDH 340
Query: 594 SELTDLIDTEGGSTDNLANQYLSLAALVVDPDSIKDGVGFDSSILDALNDPIFSKKLLVL 415
E LI+ EG ++ ++YL+ AA + KD + FD S ++ L +P FS+KLL L
Sbjct: 341 FEWNALIEAEGNIDASVCDKYLAQAANMFASVCTKDCIAFDLSSVEVLTEPFFSRKLLRL 400
Query: 414 IQILSTCRIQPDMKCIIFVNRVVVARTLSYILRNLKCLPFWKCHFLVGFHSGLKNMSRKN 235
I ILST R+QP+MK I+FVNR+V AR+LSY+L+NLK L WKC FLVG HSGLK+MSRK
Sbjct: 401 IGILSTFRLQPNMKGIVFVNRIVTARSLSYVLQNLKFLISWKCDFLVGVHSGLKSMSRKT 460
Query: 234 MNSIVEKFRSGELNLLVATRVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMPQSEY 55
MNSI+EKF++G+LNLL+AT+VGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMPQSEY
Sbjct: 461 MNSILEKFKTGKLNLLIATKVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMPQSEY 520
Query: 54 AFLVERRRPNE 22
AFLV+ E
Sbjct: 521 AFLVDSGNQKE 531
>gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 598 bits (1542), Expect = e-168
Identities = 311/487 (63%), Positives = 376/487 (77%), Gaps = 2/487 (0%)
Frame = -2
Query: 1476 PRIRARKYQLELCKKAVEENIIVYLGTGYGKTHIAVLLIYELGHLIKKPQKNVCVFLAPT 1297
PR ARKYQ++LCKKA+EEN++VYLGTG GKTHIAVLLIYE+GHLIKKPQK++CVFLAPT
Sbjct: 44 PRKIARKYQMDLCKKALEENVVVYLGTGSGKTHIAVLLIYEMGHLIKKPQKSICVFLAPT 103
Query: 1296 VPLVRQQASVIEEFTDFRVGIYYGHSKRIRNHQEWEKEIEEYEVLVMTPQILLHNLLHRL 1117
V LV+QQA VIEE DF+VG Y G SK +++HQ+WEKE+E+YEVLVMTPQILLHNL H
Sbjct: 104 VALVQQQAKVIEESIDFKVGTYCGKSKHLKSHQDWEKEMEQYEVLVMTPQILLHNLSHCY 163
Query: 1116 IKMELIALLIFDECHHAQAQSSHPYAQIMKE-YKTNTTKRPRIFGMTASPIVGKGGASPD 940
I++E IALLIFDECH+AQ +S HPYA+IMK YK + K+PRIFGMTASPI GKG
Sbjct: 164 IRIEFIALLIFDECHYAQVESDHPYAEIMKIFYKPDVVKQPRIFGMTASPISGKGAT--- 220
Query: 939 DLPRGINSLEELLDAKVYSVEDNDELERFVASPKLKFYFYGRIGDCTVTKAFLGKLEEIK 760
+ LE LL +KVYSVED DELE+FVASPK+ Y YG C TKA+ KLEEIK
Sbjct: 221 -----VEGLETLLRSKVYSVEDKDELEQFVASPKVNVYQYGPGSSCH-TKAYSQKLEEIK 274
Query: 759 NQCIETLSRTTDDVKVLRSNMKVLQRLQDSLLFCLESLGLWGAVQAVRILLSGDQSELTD 580
+QC++ L + D LR+ K+L+RL L+F LE+LG+ GA+QA ILL GD E
Sbjct: 275 HQCVKELHKKAVD-STLRNTKKMLKRLHGHLIFSLENLGVLGALQASCILLKGDHHERHQ 333
Query: 579 LIDTE-GGSTDNLANQYLSLAALVVDPDSIKDGVGFDSSILDALNDPIFSKKLLVLIQIL 403
+++ E S D+L ++YLS V KDG+ D ++++ L +P FSKKLL LI IL
Sbjct: 334 MVEAEVNASDDSLCDRYLSQVDTVFTSGCAKDGMNPDLALMEVLKEPYFSKKLLRLIGIL 393
Query: 402 STCRIQPDMKCIIFVNRVVVARTLSYILRNLKCLPFWKCHFLVGFHSGLKNMSRKNMNSI 223
S +QPDMKCI+FVNR+V AR+LSYIL++LK L WKC FLVG HSGLK+MSRKN N I
Sbjct: 394 SNFGVQPDMKCIVFVNRIVTARSLSYILQHLKILSSWKCGFLVGVHSGLKSMSRKNTNII 453
Query: 222 VEKFRSGELNLLVATRVGEEGLDIQTCCLVVRFDLPETVASFIQSRGRARMPQSEYAFLV 43
++KFRSGELNLL+AT+VGEEGLDIQTCCLV+RFDLPETVASFIQSRGRARMP+SEYAFLV
Sbjct: 454 LDKFRSGELNLLIATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPKSEYAFLV 513
Query: 42 ERRRPNE 22
+R E
Sbjct: 514 DRGNQRE 520