BLASTX nr result

ID: Cimicifuga21_contig00012243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012243
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus]                224   6e-57
emb|CAC00547.1| gamma tubulin [Nicotiana tabacum]                     224   7e-57
ref|XP_002871173.1| gamma-tubulin [Arabidopsis lyrata subsp. lyr...   223   1e-56
ref|NP_196181.1| tubulin gamma-2 chain [Arabidopsis thaliana] gi...   223   1e-56
dbj|BAB18571.1| gamma-tubulin1 [Nicotiana tabacum]                    222   2e-56

>gb|AAN87551.1|AF376053_1 gamma-tubulin [Lupinus albus]
          Length = 472

 Score =  224 bits (571), Expect = 6e-57
 Identities = 103/105 (98%), Positives = 105/105 (100%)
 Frame = +2

Query: 65  MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 244
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 245 IPRALLMDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 379
           IPRALL+DLEPRVINGIQNGEYRNLYNHEN+FLSDHGGGAGNNWA
Sbjct: 61  IPRALLIDLEPRVINGIQNGEYRNLYNHENVFLSDHGGGAGNNWA 105


>emb|CAC00547.1| gamma tubulin [Nicotiana tabacum]
          Length = 474

 Score =  224 bits (570), Expect = 7e-57
 Identities = 102/105 (97%), Positives = 105/105 (100%)
 Frame = +2

Query: 65  MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 244
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 245 IPRALLMDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 379
           IPRALLMDLEPRVINGIQNGEYRNLYNHEN+F++DHGGGAGNNWA
Sbjct: 61  IPRALLMDLEPRVINGIQNGEYRNLYNHENVFIADHGGGAGNNWA 105


>ref|XP_002871173.1| gamma-tubulin [Arabidopsis lyrata subsp. lyrata]
           gi|297317010|gb|EFH47432.1| gamma-tubulin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 474

 Score =  223 bits (569), Expect = 1e-56
 Identities = 103/105 (98%), Positives = 105/105 (100%)
 Frame = +2

Query: 65  MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 244
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISK+GILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 245 IPRALLMDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 379
           IPRALL+DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA
Sbjct: 61  IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 105


>ref|NP_196181.1| tubulin gamma-2 chain [Arabidopsis thaliana]
           gi|586080|sp|P38558.1|TBG2_ARATH RecName: Full=Tubulin
           gamma-2 chain; AltName: Full=Gamma-2-tubulin
           gi|460131|gb|AAA20654.1| g2-tubulin [Arabidopsis
           thaliana] gi|9759087|dbj|BAB09656.1| tubulin gamma-2
           chain [Arabidopsis thaliana] gi|134031920|gb|ABO45697.1|
           At5g05620 [Arabidopsis thaliana]
           gi|332003517|gb|AED90900.1| tubulin gamma-2 chain
           [Arabidopsis thaliana]
          Length = 474

 Score =  223 bits (569), Expect = 1e-56
 Identities = 103/105 (98%), Positives = 105/105 (100%)
 Frame = +2

Query: 65  MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 244
           MPREIITLQVGQCGNQIGMEFWKQLCLEHGISK+GILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 245 IPRALLMDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 379
           IPRALL+DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA
Sbjct: 61  IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 105


>dbj|BAB18571.1| gamma-tubulin1 [Nicotiana tabacum]
          Length = 474

 Score =  222 bits (566), Expect = 2e-56
 Identities = 101/105 (96%), Positives = 105/105 (100%)
 Frame = +2

Query: 65  MPREIITLQVGQCGNQIGMEFWKQLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 244
           MPREIITLQVGQCGNQIGMEFWK+LCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1   MPREIITLQVGQCGNQIGMEFWKRLCLEHGISKEGILEDFATQGGDRKDVFFYQADDQHY 60

Query: 245 IPRALLMDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 379
           IPRALLMDLEPRVINGIQNGEYRNLYNHEN+F++DHGGGAGNNWA
Sbjct: 61  IPRALLMDLEPRVINGIQNGEYRNLYNHENVFIADHGGGAGNNWA 105


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