BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012237
         (1428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263086.2| PREDICTED: putative clathrin assembly protei...   328   9e-95
emb|CAN73287.1| hypothetical protein VITISV_009769 [Vitis vinifera]   327   3e-94
ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus...   318   2e-84
gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense]              300   2e-81
gb|ACJ85393.1| unknown [Medicago truncatula] gi|388518719|gb|AFK...   288   1e-76

>ref|XP_002263086.2| PREDICTED: putative clathrin assembly protein At4g40080-like [Vitis
            vinifera] gi|297745712|emb|CBI41037.3| unnamed protein
            product [Vitis vinifera]
          Length = 354

 Score =  328 bits (841), Expect(2) = 9e-95
 Identities = 170/297 (57%), Positives = 219/297 (73%), Gaps = 5/297 (1%)
 Frame = +1

Query: 262  GRKLNLRDIVGILKDKASLSKAVVLSKPKTSTLHLSILRATTHEPSTPPHKKHMTVILSY 441
            GR   LRD++G +KDKASLSKA +LSKP T +LHLS+LRATTHEPS PPH KH+  +LS+
Sbjct: 2    GRSTKLRDLIGAIKDKASLSKAALLSKPNTLSLHLSLLRATTHEPSIPPHDKHIAALLSF 61

Query: 442  GHSSRNTASTCIEALMDRLHNTSNSFVAFKCLIIVHYIINRGSFILQDQLSIYPSIGGRN 621
            G+SSR TAS  IEALMDRL NT ++ VA KCLI VH+II RGSFILQDQLSIYPS GGRN
Sbjct: 62   GNSSRATASAVIEALMDRLQNTHDASVAIKCLIAVHHIIRRGSFILQDQLSIYPSTGGRN 121

Query: 622  YLNLSNFHDNTTSEAWNLSFWVRWYARVLESLLFTSRNLGFFLYSS---VEKDDE--KVS 786
            YL LS F D++    W LS WVRWY+  LE +L TSR LGFFL SS   V KD+E  +VS
Sbjct: 122  YLKLSGFRDSSDPITWELSSWVRWYSCYLEHVLSTSRVLGFFLCSSLSTVNKDEEVDQVS 181

Query: 787  SLLNKDLLRELDVLVSLVEEICKAPELLNVEANKLVYEAMSLVGEDKGSAQKQIMIRVNE 966
            +L N+ L+RE+  LV ++EE  KAP+ L+V  ++L+ E M+LVG+D  SA  ++ +R+NE
Sbjct: 182  ALTNQQLIREIASLVDVIEETYKAPDSLHVHGDRLLSEVMNLVGDDYLSAINEVSLRINE 241

Query: 967  MKERIGTLSFADSVELVCVLKRYKNCKERVLVLFLNKENSVGDRLWGLIEELNEKIG 1137
              ER+  LSF +SVEL+C LKR +NCKER  +    K+ S+ +  WGL+ E+ +++G
Sbjct: 242  FGERLRVLSFGESVELMCALKRLENCKERSSIQPHRKKASM-ETFWGLVSEMKDRVG 297



 Score = 47.0 bits (110), Expect(2) = 9e-95
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +2

Query: 1250 RRVGVSESARFGERVLRLDDSVRYASGRLSLGRLPLPILETIKS 1381
            RR    ESAR+GERVL+  DSVR+ SGRL   R    ILE+++S
Sbjct: 311  RRERACESARWGERVLKSSDSVRFGSGRLVSNRFAFSILESVES 354


>emb|CAN73287.1| hypothetical protein VITISV_009769 [Vitis vinifera]
          Length = 354

 Score =  327 bits (837), Expect(2) = 3e-94
 Identities = 169/297 (56%), Positives = 219/297 (73%), Gaps = 5/297 (1%)
 Frame = +1

Query: 262  GRKLNLRDIVGILKDKASLSKAVVLSKPKTSTLHLSILRATTHEPSTPPHKKHMTVILSY 441
            GR   LRD++G +KDKASLS+A +LSKP T +LHLS+LRATTHEPS PPH KH+  +LS+
Sbjct: 2    GRSTKLRDLIGAIKDKASLSRAALLSKPNTLSLHLSLLRATTHEPSIPPHDKHIAALLSF 61

Query: 442  GHSSRNTASTCIEALMDRLHNTSNSFVAFKCLIIVHYIINRGSFILQDQLSIYPSIGGRN 621
            G+SSR TAS  IEALMDRL NT ++ VA KCLI VH+II RGSFILQDQLSIYPS GGRN
Sbjct: 62   GNSSRATASAVIEALMDRLQNTHDASVAIKCLIAVHHIIRRGSFILQDQLSIYPSTGGRN 121

Query: 622  YLNLSNFHDNTTSEAWNLSFWVRWYARVLESLLFTSRNLGFFLYSS---VEKDD--EKVS 786
            YL LS F D++    W LS WVRWY+  LE +L TSR LGFFL SS   V KD+  E+VS
Sbjct: 122  YLKLSGFRDSSDPITWELSSWVRWYSCYLEHVLSTSRVLGFFLCSSLSTVNKDEEVEQVS 181

Query: 787  SLLNKDLLRELDVLVSLVEEICKAPELLNVEANKLVYEAMSLVGEDKGSAQKQIMIRVNE 966
            +L N+ L+RE+  LV ++EE  KAP+ L+V  ++L+ E M+LVG+D  SA  ++ +R+NE
Sbjct: 182  ALTNQQLIREIASLVDVIEETYKAPDSLHVHGDRLLSEVMNLVGDDYLSAINEVSLRINE 241

Query: 967  MKERIGTLSFADSVELVCVLKRYKNCKERVLVLFLNKENSVGDRLWGLIEELNEKIG 1137
              ER+  LSF +SVEL+C LKR +NCKER  +    K+ S+ +  WGL+ E+ +++G
Sbjct: 242  FGERLRXLSFGESVELMCALKRLENCKERSSIQPHRKKASM-ETFWGLVSEMKDRVG 297



 Score = 46.6 bits (109), Expect(2) = 3e-94
 Identities = 24/44 (54%), Positives = 30/44 (68%)
 Frame = +2

Query: 1250 RRVGVSESARFGERVLRLDDSVRYASGRLSLGRLPLPILETIKS 1381
            RR    ESAR+GERVL+  DSVR+ SGRL   R    ILE+++S
Sbjct: 311  RRERXCESARWGERVLKSSDSVRFGSGRLVSNRFAFSILESVES 354


>ref|XP_002533971.1| clathrin assembly protein, putative [Ricinus communis]
            gi|223526043|gb|EEF28409.1| clathrin assembly protein,
            putative [Ricinus communis]
          Length = 271

 Score =  318 bits (816), Expect = 2e-84
 Identities = 163/266 (61%), Positives = 205/266 (77%), Gaps = 5/266 (1%)
 Frame = +1

Query: 271  LNLRDIVGILKDKASLSKAVVLSKPKTSTLHLSILRATTHEPSTPPHKKHMTVILSYGHS 450
            +NLRD++GI+KDKAS SKA V+ KPKT +LHL++LRATTH+P TPP+ KH+T +LSYGHS
Sbjct: 5    INLRDLIGIIKDKASQSKAAVIRKPKTFSLHLALLRATTHDPFTPPNSKHITTVLSYGHS 64

Query: 451  SRNTASTCIEALMDRLHNTSNSFVAFKCLIIVHYIINRGSFILQDQLSIYPSIGGRNYLN 630
            SR TA++ IEALMDRL +T +S VA KCLIIVH+II  GSFILQDQLS+YPS GGRNYL 
Sbjct: 65   SRATAASAIEALMDRLQSTHDSSVAVKCLIIVHHIIKHGSFILQDQLSVYPSTGGRNYLK 124

Query: 631  LSNFHDNTTSEAWNLSFWVRWYARVLESLLFTSRNLGFFLYSS-----VEKDDEKVSSLL 795
            LS+F DNTT   W LS WVRWYAR LE LL TSR LGFFL S+      +K++EKVS+L 
Sbjct: 125  LSSFRDNTTPLTWELSSWVRWYARYLEHLLSTSRVLGFFLCSTSGTAEKDKEEEKVSALT 184

Query: 796  NKDLLRELDVLVSLVEEICKAPELLNVEANKLVYEAMSLVGEDKGSAQKQIMIRVNEMKE 975
            N DLL+E+D L +L+EEI K P+ L+++ N LV + +SLV ED  S+  +   RV+E  +
Sbjct: 185  NSDLLKEIDSLSNLIEEISKRPDSLHLKDNGLVDQIISLVDEDYLSSINETAARVDEFDQ 244

Query: 976  RIGTLSFADSVELVCVLKRYKNCKER 1053
            R+  LSF DSVEL CVLKR + CK++
Sbjct: 245  RMSCLSFGDSVELGCVLKRLEACKDK 270


>gb|AAP34366.1| fiber protein Fb19 [Gossypium barbadense]
          Length = 351

 Score =  300 bits (768), Expect(2) = 2e-81
 Identities = 158/290 (54%), Positives = 206/290 (71%), Gaps = 5/290 (1%)
 Frame = +1

Query: 283  DIVGILKDKASLSKAVVLSKPKTSTLHLSILRATTHEPSTPPHKKHMTVILSYGHSSRNT 462
            D++GI+KDKAS SKA ++S P+T +LHL++LRATTH+P +PP   H+  +LS+GH SR T
Sbjct: 2    DLIGIIKDKASQSKAALISNPRTLSLHLALLRATTHDPFSPPDPTHLATLLSFGHCSRAT 61

Query: 463  ASTCIEALMDRLHNTSNSFVAFKCLIIVHYIINRGSFILQDQLSIYPSIGGRNYLNLSNF 642
            AST ++A+MDRL  T ++ VA KCLI VH+II RGSFILQDQ S+YPS GGRNYL LSNF
Sbjct: 62   ASTAVDAIMDRLQTTRDASVAIKCLITVHHIIKRGSFILQDQFSVYPSTGGRNYLKLSNF 121

Query: 643  HDNTTSEAWNLSFWVRWYARVLESLLFTSRNLGFFL---YSSVEKD--DEKVSSLLNKDL 807
             D+TT   W LS WVRWYA  LE+LL TSR LGFFL    SSV+KD  +++VSSL+N +L
Sbjct: 122  RDDTTPLTWELSSWVRWYALYLENLLSTSRILGFFLCSTSSSVDKDREEDRVSSLINTEL 181

Query: 808  LRELDVLVSLVEEICKAPELLNVEANKLVYEAMSLVGEDKGSAQKQIMIRVNEMKERIGT 987
            L+E++ L +L+E+I K P+  N   N LV   + LVGED  S+  +I IRV E KER+  
Sbjct: 182  LKEINSLGNLIEQIAKKPDSSNSNGNVLVDAVLGLVGEDYLSSINEISIRVXEFKERL-D 240

Query: 988  LSFADSVELVCVLKRYKNCKERVLVLFLNKENSVGDRLWGLIEELNEKIG 1137
            L F D VELVC L+R + CKER       K+  + + +WG I E+ + IG
Sbjct: 241  LGFVDXVELVCALRRXEECKERXSXXSPRKKVMI-ESVWGSIXEVKDXIG 289



 Score = 30.8 bits (68), Expect(2) = 2e-81
 Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = +2

Query: 1250 RRVGVSESARFGERVL--RLDDSVRYASGR 1333
            RR  VSESA FGERV+     +SV+++SGR
Sbjct: 306  RRXQVSESAXFGERVVMKXXXNSVKFSSGR 335


>gb|ACJ85393.1| unknown [Medicago truncatula] gi|388518719|gb|AFK47421.1| unknown
            [Medicago truncatula]
          Length = 326

 Score =  288 bits (736), Expect(2) = 1e-76
 Identities = 155/291 (53%), Positives = 207/291 (71%), Gaps = 1/291 (0%)
 Frame = +1

Query: 268  KLNLRDIVGILKDKASLSKAVVLSKPKTSTLHLSILRATTHEPSTPPHKKHMTVILSYGH 447
            KL + +++ I+KDKAS SKA +LSKP T    LS+LRATTH+  TPP  KH++ +LS   
Sbjct: 3    KLTVTNLINIIKDKASQSKAALLSKPTT----LSLLRATTHDSFTPPTHKHISTLLSSTD 58

Query: 448  SSRNTASTCIEALMDRLHNTSNSFVAFKCLIIVHYIINRGSFILQDQLSIYPSIGGRNYL 627
             SR TAS+ +E LMDRL NT+N+ VA K LIIVH+II+ GSFILQDQLS+YPS GGRNYL
Sbjct: 59   GSRATASSFLELLMDRLQNTNNAAVALKSLIIVHHIISHGSFILQDQLSVYPSTGGRNYL 118

Query: 628  NLSNFHDNTTSEAWNLSFWVRWYARVLESLLFTSRNLG-FFLYSSVEKDDEKVSSLLNKD 804
            NLSNF  NT   +W LS WVRW+A+ +E+LL TSR LG FFL  S+   +E+VS L N  
Sbjct: 119  NLSNFRHNTNPTSWELSCWVRWFAQHIENLLCTSRILGFFFLGKSLCDGEERVSCLTNCG 178

Query: 805  LLRELDVLVSLVEEICKAPELLNVEANKLVYEAMSLVGEDKGSAQKQIMIRVNEMKERIG 984
            LL+E D LV+LVE ICK P+ +N+  NKLV E ++LV ED    +  +++ VNE KER+G
Sbjct: 179  LLKEFDSLVTLVEGICKRPDQVNM--NKLVGEIVNLVCEDWVVIETVVIVEVNEFKERLG 236

Query: 985  TLSFADSVELVCVLKRYKNCKERVLVLFLNKENSVGDRLWGLIEELNEKIG 1137
             L F ++VEL+C LKR + CKERV+++  +++      LW  + E+ +K+G
Sbjct: 237  CLEFGEAVELICCLKRLEECKERVVMILESQQG-----LWDSVREVKDKVG 282



 Score = 26.9 bits (58), Expect(2) = 1e-76
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +2

Query: 1250 RRVGVSESARFGERVLRLDDSVRYASGRL 1336
            R+   SES RF  RV+   DS+ + SGRL
Sbjct: 297  RKSRFSESDRFSARVISSRDSLWFPSGRL 325