BLASTX nr result

ID: Cimicifuga21_contig00012235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012235
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517266.1| PREDICTED: LOW QUALITY PROTEIN: NASP-related...    71   2e-10
ref|NP_001242869.1| uncharacterized protein LOC100789496 [Glycin...    70   4e-10
gb|AFK47874.1| unknown [Medicago truncatula]                           69   9e-10
ref|XP_003611854.1| Nuclear autoantigenic sperm protein [Medicag...    69   9e-10
ref|XP_002522382.1| conserved hypothetical protein [Ricinus comm...    69   9e-10

>ref|XP_003517266.1| PREDICTED: LOW QUALITY PROTEIN: NASP-related protein sim3-like
           [Glycine max]
          Length = 418

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 39/78 (50%), Positives = 45/78 (57%)
 Frame = +1

Query: 193 FNDRCNLRVAHYGELAPECSTACYKYERAQLYKHQEEADPFGSVPKKNVGSVQISEIDGS 372
           F+    +RVAHYGELAPEC    YKY  A LYK QEEADP   VPKK  GS   S  DGS
Sbjct: 90  FSRALEIRVAHYGELAPECVHTYYKYGCALLYKAQEEADPLADVPKKEDGSQHGSNKDGS 149

Query: 373 LSKGDCSASSVVDGTFNS 426
           +     + SS    + N+
Sbjct: 150 VKSSLNAESSTASFSSNA 167


>ref|NP_001242869.1| uncharacterized protein LOC100789496 [Glycine max]
           gi|255635983|gb|ACU18337.1| unknown [Glycine max]
          Length = 418

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 39/70 (55%), Positives = 43/70 (61%)
 Frame = +1

Query: 193 FNDRCNLRVAHYGELAPECSTACYKYERAQLYKHQEEADPFGSVPKKNVGSVQISEIDGS 372
           F+    +RVAHYGELAPEC    YKY  A LYK QEEADP   VPKK  GS   S  DG 
Sbjct: 90  FSRALEIRVAHYGELAPECVHTYYKYGCALLYKAQEEADPLADVPKKEDGSQHGSNKDGP 149

Query: 373 LSKGDCSASS 402
           + KG  +A S
Sbjct: 150 V-KGSLNAES 158


>gb|AFK47874.1| unknown [Medicago truncatula]
          Length = 455

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 38/64 (59%), Positives = 43/64 (67%)
 Frame = +1

Query: 211 LRVAHYGELAPECSTACYKYERAQLYKHQEEADPFGSVPKKNVGSVQISEIDGSLSKGDC 390
           +RVAHYGELAPEC    YKY  A LYK QEEADP G+VPKK  GS   S+ D  + KG  
Sbjct: 92  IRVAHYGELAPECVHTYYKYGCALLYKAQEEADPLGAVPKKQEGSPHGSDKDEPV-KGAV 150

Query: 391 SASS 402
           +A S
Sbjct: 151 NAES 154


>ref|XP_003611854.1| Nuclear autoantigenic sperm protein [Medicago truncatula]
           gi|355513189|gb|AES94812.1| Nuclear autoantigenic sperm
           protein [Medicago truncatula]
          Length = 443

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 38/64 (59%), Positives = 43/64 (67%)
 Frame = +1

Query: 211 LRVAHYGELAPECSTACYKYERAQLYKHQEEADPFGSVPKKNVGSVQISEIDGSLSKGDC 390
           +RVAHYGELAPEC    YKY  A LYK QEEADP G+VPKK  GS   S+ D  + KG  
Sbjct: 92  IRVAHYGELAPECVHTYYKYGCALLYKAQEEADPLGAVPKKQEGSPHGSDKDEPV-KGAV 150

Query: 391 SASS 402
           +A S
Sbjct: 151 NAES 154


>ref|XP_002522382.1| conserved hypothetical protein [Ricinus communis]
           gi|223538460|gb|EEF40066.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 459

 Score = 69.3 bits (168), Expect = 9e-10
 Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
 Frame = +1

Query: 193 FNDRCNLRVAHYGELAPECSTACYKYERAQLYKHQEEADPFGSVPKKNVGSVQISEIDGS 372
           F+    +RV++YGELA EC +A Y+Y RA LYK QEEADP  +VPK++  S Q S+ DGS
Sbjct: 66  FSRALEIRVSYYGELALECLSAYYQYGRALLYKAQEEADPLATVPKRDAESKQESDQDGS 125

Query: 373 LS---KGDCSASSVV 408
           +    K + S +S V
Sbjct: 126 VKSAMKAESSTASAV 140


Top