BLASTX nr result

ID: Cimicifuga21_contig00012234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012234
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316411.1| predicted protein [Populus trichocarpa] gi|2...    87   2e-15
emb|CAN72854.1| hypothetical protein VITISV_043216 [Vitis vinifera]    86   4e-15
ref|XP_002315344.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002523743.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
gb|ACJ84090.1| unknown [Medicago truncatula]                           72   4e-11

>ref|XP_002316411.1| predicted protein [Populus trichocarpa] gi|222865451|gb|EEF02582.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = -1

Query: 369 QSSGSDDECQTPTSSEYKIPMIECCPPAPRKRRAVMLCKRKLSEMQFFEIVGRGEIESFF 190
           ++S +DD+CQTP S E+KIP +  CPPAPRK +  + CKRKL+E+ FFEIV   E++SFF
Sbjct: 41  ENSETDDDCQTPKSEEHKIPAVLSCPPAPRKAKRNISCKRKLTEIDFFEIVNGEEVDSFF 100

Query: 189 RSS--LSRKRPCP 157
           +SS  L  KR CP
Sbjct: 101 QSSFELLTKRRCP 113


>emb|CAN72854.1| hypothetical protein VITISV_043216 [Vitis vinifera]
          Length = 102

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/78 (55%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
 Frame = -1

Query: 381 GGAIQSSGSDDE-CQTPTSSEYKIPMIECCPPAPRKRRAVMLCKRKLSEMQFFEIVGRGE 205
           G  I+S  ++   C+TPTS+E+KIP+I  CPPAPRK R V+ CKR++ E  FFEIV R E
Sbjct: 22  GSKIESDNAETSPCRTPTSAEHKIPVILTCPPAPRKPRRVVRCKRRIREFDFFEIVNRDE 81

Query: 204 IESFFRSSL---SRKRPC 160
           +E FFRSSL     KR C
Sbjct: 82  VEEFFRSSLEVGEAKRRC 99


>ref|XP_002315344.1| predicted protein [Populus trichocarpa] gi|222864384|gb|EEF01515.1|
           predicted protein [Populus trichocarpa]
          Length = 103

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = -1

Query: 450 MFTIFPGFHLKPIDVQRRQSDEDGGAIQSSGSDDECQTPTSSEYKIPMIECCPPAPRKR- 274
           +F   P   LK I   R    ED    Q      EC TPTS+++KIP +  CPPAP+K  
Sbjct: 7   LFQNLPKLGLKVIKTTRNDDGEDDDCEQY-----ECCTPTSAQHKIPALLTCPPAPKKPP 61

Query: 273 RAVMLCKRKLSEMQFFEIVGRGEIESFFRSS 181
           R+   CKRKLS + FFE++ R E++ FFRSS
Sbjct: 62  RSPDSCKRKLSNLHFFEVMNREEVDLFFRSS 92


>ref|XP_002523743.1| conserved hypothetical protein [Ricinus communis]
           gi|223537047|gb|EEF38683.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 140

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = -1

Query: 354 DDECQTPTSSEYKIPMIECCPPAPRKR-RAVMLCKRKLSEMQFFEIVGRGEIESFFRSSL 178
           ++EC+TPTSS++KIP I+ CPP PRK+     L KRKL E++FFE   + E++SFFRS+ 
Sbjct: 64  EEECKTPTSSDHKIPSIQTCPPTPRKKAHKSFLHKRKLPELEFFEASNKDEVDSFFRSNF 123

Query: 177 SRKR 166
              R
Sbjct: 124 EMSR 127


>gb|ACJ84090.1| unknown [Medicago truncatula]
          Length = 135

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
 Frame = -1

Query: 462 LPTIMFTIFPGFHLKPIDVQRRQSDEDGGAIQSSGSDDECQTPTSSEYKIPMIECCPPAP 283
           +P +  T+     ++P ++++   D   GA+     D+  +TPTS E KIP I  CPPAP
Sbjct: 36  VPDVADTMSSSAIIEP-EIEKENVD---GAVVDGEIDESYRTPTSKESKIPEIHDCPPAP 91

Query: 282 RKRRAVMLCKRKL-SEMQFFEIVGRGEIESFFRSSLSRKRPCPKT 151
           RK +  + CKRKL  + QFFE+    ++++FFRS+   KR CP T
Sbjct: 92  RKPKPFVSCKRKLMDDFQFFEVKNNEDMDAFFRSTFP-KRTCPCT 135


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