BLASTX nr result

ID: Cimicifuga21_contig00012219 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012219
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528574.1| conserved hypothetical protein [Ricinus comm...   298   1e-78
ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBS...   291   2e-76
ref|XP_002519040.1| conserved hypothetical protein [Ricinus comm...   277   4e-72
ref|XP_002305808.1| predicted protein [Populus trichocarpa] gi|2...   257   4e-66
ref|XP_004146648.1| PREDICTED: CBS domain-containing protein CBS...   248   3e-63

>ref|XP_002528574.1| conserved hypothetical protein [Ricinus communis]
            gi|223532018|gb|EEF33829.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 408

 Score =  298 bits (764), Expect = 1e-78
 Identities = 164/284 (57%), Positives = 201/284 (70%), Gaps = 7/284 (2%)
 Frame = -2

Query: 1117 GAQNLVIPIK---NSITQRKKILQKSSLGAT--TTLHNGREFCWITQEDVIRYLLNLIGL 953
            GAQNLV+PIK   +S   R+K  QK S  +T  TT+H GREFCW+ QED+IR+ L+ IGL
Sbjct: 131  GAQNLVVPIKTRLSSSNSRRKQQQKLSATSTGLTTIHKGREFCWLAQEDIIRFFLSSIGL 190

Query: 952  FSPIPARSIESLGLIRRDLHAIGYHEPASSAISAILDAHTKQTSVAVVD-EEGILIGELS 776
            FSP+PA SI+SLG+I  D+  I Y+ PAS+ + AI  A   QTSVAVVD +EGILIGELS
Sbjct: 191  FSPVPALSIDSLGIITTDIITIDYNSPASATLGAINRALATQTSVAVVDGDEGILIGELS 250

Query: 775  PFTLTCCDETVSAAITTLSAGDLMAYIECGGPPEDIVRVVKARLTERKLESML-DFLEEE 599
            PFTL CCDETV+AAITTLS+GDLMAYI+CGGPPED+VRVV ARL  R LE+ML +F    
Sbjct: 251  PFTLACCDETVAAAITTLSSGDLMAYIDCGGPPEDLVRVVMARLKHRGLEAMLQEFTNST 310

Query: 598  APLIRXXXXXXXXXXXSPTAILXXXXXXXXXXXXXXXRFGSYCTRMARRAEALLCYPRSS 419
              L+              T  L                  SY  RM RRAEA++C+P+SS
Sbjct: 311  TSLVSFSTLSSSSSDEESTTTLHRSGKYSRSK--------SYSARMVRRAEAIVCHPKSS 362

Query: 418  LVAVMVQALAHRVSYVWVLEDDGSLVGIVTFLDMLKVFQEHLQS 287
            LVAVM+QA+AHRV+YVWV+E+D SLVGIVTF +MLKVF+EHL++
Sbjct: 363  LVAVMIQAIAHRVNYVWVIEEDCSLVGIVTFCNMLKVFREHLEA 406


>ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBSX5 [Vitis vinifera]
          Length = 384

 Score =  291 bits (745), Expect = 2e-76
 Identities = 152/278 (54%), Positives = 197/278 (70%), Gaps = 1/278 (0%)
 Frame = -2

Query: 1117 GAQNLVIPIKNSITQRKKILQKSSLGATTTLHNGREFCWITQEDVIRYLLNLIGLFSPIP 938
            GAQN+VIPI++    RKK++ K S  +T  LHNG EFCW+TQEDV+R+LLN IG FSP+P
Sbjct: 125  GAQNIVIPIQSRTNPRKKLVPKPSFNST--LHNGVEFCWLTQEDVVRFLLNSIGSFSPLP 182

Query: 937  ARSIESLGLI-RRDLHAIGYHEPASSAISAILDAHTKQTSVAVVDEEGILIGELSPFTLT 761
              +IESL +I   ++ ++ YH+PASSA++AI  +   QTSVAV+D+E  L+GE+SPFTL 
Sbjct: 183  GLTIESLNIIDTENIPSVYYHDPASSALTAISQSLINQTSVAVLDQENKLVGEISPFTLA 242

Query: 760  CCDETVSAAITTLSAGDLMAYIECGGPPEDIVRVVKARLTERKLESMLDFLEEEAPLIRX 581
            CCDETV+AAI TLSAGDLMAYI+CGGPPED+V++VKARL ERKL + LD ++EE      
Sbjct: 243  CCDETVAAAIATLSAGDLMAYIDCGGPPEDLVQLVKARLEERKLGAFLDLMDEE------ 296

Query: 580  XXXXXXXXXXSPTAILXXXXXXXXXXXXXXXRFGSYCTRMARRAEALLCYPRSSLVAVMV 401
                         +                   G Y  RMARR+EA++CYP SSL+AVM+
Sbjct: 297  ------------FSYSSSSSSDEEFGFGRRGGSGKYSARMARRSEAIVCYPWSSLMAVMI 344

Query: 400  QALAHRVSYVWVLEDDGSLVGIVTFLDMLKVFQEHLQS 287
            QALAHRVSYVWV+E+D SL GIVTF  + KVF++HL++
Sbjct: 345  QALAHRVSYVWVIEEDWSLAGIVTFSGIFKVFRQHLRT 382


>ref|XP_002519040.1| conserved hypothetical protein [Ricinus communis]
            gi|223541703|gb|EEF43251.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 396

 Score =  277 bits (708), Expect = 4e-72
 Identities = 146/278 (52%), Positives = 195/278 (70%), Gaps = 1/278 (0%)
 Frame = -2

Query: 1117 GAQNLVIPIKNSITQRKKILQKSSLGATTTLHNGREFCWITQEDVIRYLLNLIGLFSPIP 938
            GAQNLVIP+ +  T++K I + SS    +TLHN RE+CW+TQED+IRYLLN IGLFSPIP
Sbjct: 130  GAQNLVIPVHSPFTRKKLIHRTSSY---STLHNNREYCWLTQEDIIRYLLNCIGLFSPIP 186

Query: 937  ARSIESLGLIRRD-LHAIGYHEPASSAISAILDAHTKQTSVAVVDEEGILIGELSPFTLT 761
              ++ESL +I  + + A+ Y EPASSA+  I  +  KQTSVA++D EG LIGE+SP+TL 
Sbjct: 187  NHTVESLNIIDTESILAVCYDEPASSALPLISQSLVKQTSVAILDIEGKLIGEISPYTLN 246

Query: 760  CCDETVSAAITTLSAGDLMAYIECGGPPEDIVRVVKARLTERKLESMLDFLEEEAPLIRX 581
             CDE V+AAI TLSAG+LMAY++CG PPED++R+VK RL ER LE +L+ +EEE+ +   
Sbjct: 247  SCDELVAAAIATLSAGELMAYVDCGDPPEDLIRLVKERLEERNLEIVLELMEEESGISSS 306

Query: 580  XXXXXXXXXXSPTAILXXXXXXXXXXXXXXXRFGSYCTRMARRAEALLCYPRSSLVAVMV 401
                      S                     F  + TR+ARR +A++C+P SSLVAVM+
Sbjct: 307  SSSFSSFSSSSDEEF----------GLGKSGSFRGHSTRVARRTDAIVCFPWSSLVAVMI 356

Query: 400  QALAHRVSYVWVLEDDGSLVGIVTFLDMLKVFQEHLQS 287
            QA++HR SYVWV+E+DG+LVG+VTF  MLKVF+E ++S
Sbjct: 357  QAISHRASYVWVVEEDGTLVGVVTFTGMLKVFRERVKS 394


>ref|XP_002305808.1| predicted protein [Populus trichocarpa] gi|222848772|gb|EEE86319.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  257 bits (656), Expect = 4e-66
 Identities = 142/278 (51%), Positives = 182/278 (65%), Gaps = 1/278 (0%)
 Frame = -2

Query: 1117 GAQNLVIPIKNSITQRKKILQKSSLGATTTLHNGREFCWITQEDVIRYLLNLIGLFSPIP 938
            GAQNLVIP+ N  T RKK++ KS+  A +TLHN RE+CW+TQED++RYLLN IGLFSP P
Sbjct: 131  GAQNLVIPLHNPFT-RKKLISKST--ANSTLHNNREYCWLTQEDIVRYLLNSIGLFSPTP 187

Query: 937  ARSIESLGLIRRD-LHAIGYHEPASSAISAILDAHTKQTSVAVVDEEGILIGELSPFTLT 761
              +IESL +I  +    + Y +PA  A+  I  +  KQTSVA++D +G LIGE+SPFTL 
Sbjct: 188  NHTIESLNIIDTESFFTVHYDDPA--ALPLISQSLVKQTSVAILDADGKLIGEISPFTLN 245

Query: 760  CCDETVSAAITTLSAGDLMAYIECGGPPEDIVRVVKARLTERKLESMLDFLEEEAPLIRX 581
             CDETV+AAI TLSAG+LMAYIECG PPED++ +VK RL ER L   LD +EEE+ ++  
Sbjct: 246  FCDETVAAAIATLSAGELMAYIECGDPPEDLIMLVKERLEERNLGPALDLIEEESGILSS 305

Query: 580  XXXXXXXXXXSPTAILXXXXXXXXXXXXXXXRFGSYCTRMARRAEALLCYPRSSLVAVMV 401
                                           R      R+ R  E ++CYP SSLVAVM+
Sbjct: 306  SSDSS-----------YSSSSDEEFGMVRSGRIAGNSARVGRSTETIVCYPWSSLVAVMI 354

Query: 400  QALAHRVSYVWVLEDDGSLVGIVTFLDMLKVFQEHLQS 287
            QAL+HR SY WV+E+DG+LVG VTF  M+KV +E L+S
Sbjct: 355  QALSHRSSYTWVIEEDGTLVGGVTFAGMIKVLRERLRS 392


>ref|XP_004146648.1| PREDICTED: CBS domain-containing protein CBSX5-like [Cucumis sativus]
            gi|449527799|ref|XP_004170897.1| PREDICTED: CBS
            domain-containing protein CBSX5-like [Cucumis sativus]
          Length = 398

 Score =  248 bits (632), Expect = 3e-63
 Identities = 134/277 (48%), Positives = 182/277 (65%), Gaps = 1/277 (0%)
 Frame = -2

Query: 1117 GAQNLVIPIKNSITQRKKILQKSSLGATTTLHNGREFCWITQEDVIRYLLNLIGLFSPIP 938
            G  NLVIPIK SI++RK IL+KS   + ++LHN +E+CW+  ED+IRYLLN IGLFS   
Sbjct: 125  GVHNLVIPIKMSISKRKNILKKSLANSISSLHNDQEYCWLAPEDIIRYLLNSIGLFSTTA 184

Query: 937  ARSIESLGLI-RRDLHAIGYHEPASSAISAILDAHTKQTSVAVVDEEGILIGELSPFTLT 761
            A  I S  +I   ++ A+ Y E A S +  I  A   Q+SVA+VD +  LIGE+SPFTL 
Sbjct: 185  ANPINSFNIIDTNNILAVRYDESALSILPLISQALIHQSSVAIVDLDDKLIGEISPFTLN 244

Query: 760  CCDETVSAAITTLSAGDLMAYIECGGPPEDIVRVVKARLTERKLESMLDFLEEEAPLIRX 581
             CDETV AAI TL+AG+LM YI+CGGPP+D+V++VK RL E+ LE++L+++EEE+  I  
Sbjct: 245  FCDETVVAAIATLTAGELMGYIDCGGPPDDLVQLVKERLEEKNLEAVLEWVEEESLTISS 304

Query: 580  XXXXXXXXXXSPTAILXXXXXXXXXXXXXXXRFGSYCTRMARRAEALLCYPRSSLVAVMV 401
                                           R   Y  R+ RR+EA++CYP +SLVAVM+
Sbjct: 305  SSSSICSSSDD-----EFGCGSSSSGSGRSGRICGYSARVMRRSEAIVCYPWNSLVAVMI 359

Query: 400  QALAHRVSYVWVLEDDGSLVGIVTFLDMLKVFQEHLQ 290
            QALAHRVSY+WV+++DG+L G VTF  +L VF++ L+
Sbjct: 360  QALAHRVSYMWVIQEDGTLAGTVTFPSLLAVFRDRLK 396


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