BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012214
         (1221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vit...   308   2e-81
ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|2...   274   4e-71
ref|XP_002513900.1| conserved hypothetical protein [Ricinus comm...   249   1e-63
ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata sub...   229   8e-58
ref|NP_565169.1| F-box protein [Arabidopsis thaliana] gi|7526224...   225   2e-56

>ref|XP_002284195.1| PREDICTED: F-box protein At1g78100-like [Vitis vinifera]
          Length = 320

 Score =  308 bits (788), Expect = 2e-81
 Identities = 183/332 (55%), Positives = 219/332 (65%), Gaps = 7/332 (2%)
 Frame = -3

Query: 1099 HQQS-DGFDRIPDDLILVIFNQLSDIKALTRCRSVSKRFNSLVPQAETLLVKVDCVISSE 923
            HQ S D FDR+PD LILVIFN ++DIK L RCR+VSKRFNSLVPQAETL++KVD VIS++
Sbjct: 2    HQMSEDSFDRLPDPLILVIFNSVADIKTLIRCRAVSKRFNSLVPQAETLVLKVDRVISTD 61

Query: 922  TTDSTXXXXXXXXXXXLQDLISPKTHPIQPPNPSSPSEILRGFEKIKQLEIELPSGDLRL 743
            +  S            L  +ISPK+ PIQP   +SP++ILRGF++I+ LEIELP GDL L
Sbjct: 62   SDGSFFLSFLKSIFRSLHHIISPKSLPIQPRPHNSPTQILRGFDRIRNLEIELPGGDLCL 121

Query: 742  EKGTVLRWKAEFGKSLKSCVILAVRSIGGDRDGDNGDEIDFNGDNGGGLKLRVVWTISAL 563
            EKG VL+WKAEFGK LKSCVI+  R +G       G+E+DF GD  GGLK+RVVWTISAL
Sbjct: 122  EKGAVLKWKAEFGKRLKSCVIMGYRGLG------EGEELDFGGDMDGGLKVRVVWTISAL 175

Query: 562  IAASARHYLLREVIREHKEMESLVLRDREGEGRVVMXXXXXXXXXXXXXXXEAHISTV-- 389
            IAASARHYLLRE+IREH+E+E LVLRDR+GEG VVM               E     V  
Sbjct: 176  IAASARHYLLRELIREHRELERLVLRDRDGEGTVVMDREALRECRDGEGEEEQEEEAVEP 235

Query: 388  --GWKNRTTVPAVRMRMRHASSIDLPG-GVRIRGATLVIVKP-TDGLETMKSEVEDQMED 221
                K+RT VPAV+MRMRH   ++L G GVR+ GATLV+V P  DG +T         E+
Sbjct: 236  GERDKSRTKVPAVQMRMRHEPLLELEGCGVRMGGATLVVVTPIKDGRKT-------GTEE 288

Query: 220  KXXXXXXXXXXXXXXXGTLLKKPSYLLEMNSF 125
                             TLLK  +YLLEMNSF
Sbjct: 289  AGLVCDAFEGMFGEAARTLLKTRTYLLEMNSF 320


>ref|XP_002307387.1| predicted protein [Populus trichocarpa] gi|222856836|gb|EEE94383.1|
            predicted protein [Populus trichocarpa]
          Length = 312

 Score =  274 bits (700), Expect = 4e-71
 Identities = 160/325 (49%), Positives = 194/325 (59%), Gaps = 4/325 (1%)
 Frame = -3

Query: 1087 DGFDRIPDDLILVIFNQLSDIKALTRCRSVSKRFNSLVPQAETLLVKVDCVISSETTDST 908
            DGFDR+PD LIL+IFN +SDIKAL RCRSVSKRFNSLVPQ E+L +KVDCVIS E+   +
Sbjct: 6    DGFDRLPDSLILLIFNSISDIKALIRCRSVSKRFNSLVPQTESLSLKVDCVISPESDSDS 65

Query: 907  XXXXXXXXXXXLQDLISPKTHP-IQPPNPSSPSEILRGFEKIKQLEIELPSGDLRLEKGT 731
                       + DL  P   P  +    +SP+ IL  F++I+ L+IELP+GDL+LEKG 
Sbjct: 66   LFTLFKSLLKSIHDLFKPDPKPTARNQTQNSPARILSQFDRIRDLQIELPAGDLKLEKGA 125

Query: 730  VLRWKAEFGKSLKSCVILAVRSIGGDRDGDNGDEIDFNGDNGGGLKLRVVWTISALIAAS 551
            V++W+AEFGKSLKSCVIL  R +         +EIDF     GGLK RVVW ISALIAAS
Sbjct: 126  VIKWRAEFGKSLKSCVILGFRRVANPEGNSADEEIDFT----GGLKTRVVWAISALIAAS 181

Query: 550  ARHYLLREVIREHKEMESLVLRDREGEGRVVMXXXXXXXXXXXXXXXEAHISTVGWK--- 380
            ARHYLL +V++ H+EME LVL DREGEG V M               E       W+   
Sbjct: 182  ARHYLLNDVVKGHREMERLVLVDREGEGTVAMEKEGLRECREAARGGE-------WEEDG 234

Query: 379  NRTTVPAVRMRMRHASSIDLPGGVRIRGATLVIVKPTDGLETMKSEVEDQMEDKXXXXXX 200
             RT VP+VRMRMRH   + L  GV + G TLV+V+P  G         D  + +      
Sbjct: 235  GRTVVPSVRMRMRHEQRVQLKDGVWMEGVTLVVVRPCSG-------GGDGEDAELALGAF 287

Query: 199  XXXXXXXXXGTLLKKPSYLLEMNSF 125
                       LLK  SYLLEMNSF
Sbjct: 288  GGGIYGEAVQVLLKNKSYLLEMNSF 312


>ref|XP_002513900.1| conserved hypothetical protein [Ricinus communis]
            gi|223546986|gb|EEF48483.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 303

 Score =  249 bits (635), Expect = 1e-63
 Identities = 155/328 (47%), Positives = 201/328 (61%), Gaps = 7/328 (2%)
 Frame = -3

Query: 1087 DGFDRIPDDLILVIFNQLSDIKALTRCRSVSKRFNSLVPQAETLLVKVDCVISSET-TDS 911
            DGFDR+PD LI++IFN +S IK L RCRSVSKRFNSLVPQ E+LL+ VD VIS+E+ T+ 
Sbjct: 2    DGFDRLPDSLIVLIFNSVSHIKTLIRCRSVSKRFNSLVPQTESLLLTVDRVISTESDTEI 61

Query: 910  TXXXXXXXXXXXLQDLISP-KTHPIQPPN--PSSPSEILRGFEKIKQLEIELPSGDLRLE 740
                        + DL  P +  PIQ  N   ++P++IL  FE+I+ LEIELP+GDL+LE
Sbjct: 62   LLLAFLKSLLKSIHDLFKPDEEKPIQNVNLTQNTPAQILSRFERIRDLEIELPAGDLKLE 121

Query: 739  KGTVLRWKAEFGKSLKSCVILAVRSIGGDRDGDNGDEIDFNGDNGGGLKLRVVWTISALI 560
            KG V++W+AE+GK+LKSCVI+  R+        N D+ D        LK RVVWTISALI
Sbjct: 122  KGVVIKWRAEYGKTLKSCVIMGFRT-------RNSDDFD--------LKARVVWTISALI 166

Query: 559  AASARHYLLREVIREHKEMESLVLRDREGEGRVVMXXXXXXXXXXXXXXXEAHISTVGWK 380
            AASARHYLL++V+REH+EME LVL+D++ EG VVM                A      W+
Sbjct: 167  AASARHYLLKDVVREHEEMERLVLKDKDEEGTVVM----EKDDLRECRIDMAARGKDEWE 222

Query: 379  ---NRTTVPAVRMRMRHASSIDLPGGVRIRGATLVIVKPTDGLETMKSEVEDQMEDKXXX 209
                RT VP+VRMR+RH + + L  G  + GATLV+V+P        ++VED    +   
Sbjct: 223  WQARRTVVPSVRMRVRHETRVRLSDGTWLEGATLVVVRPC----VADADVEDA---ELAM 275

Query: 208  XXXXXXXXXXXXGTLLKKPSYLLEMNSF 125
                          LLK  SY+LEMNSF
Sbjct: 276  DAFGGEVYGEAVKLLLKTKSYVLEMNSF 303


>ref|XP_002887721.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333562|gb|EFH63980.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score =  229 bits (585), Expect = 8e-58
 Identities = 142/339 (41%), Positives = 199/339 (58%), Gaps = 18/339 (5%)
 Frame = -3

Query: 1087 DGFDRIPDDLILVIFNQLSDIKALTRCRSVSKRFNSLVPQAETLLVKVDCVISSETTDST 908
            D FD IPD +++ I N++ D+K L RCRSVSKRFNSL  Q+++LL+++D ++ +  +DS 
Sbjct: 2    DAFDAIPDPVVIDILNKVGDVKTLIRCRSVSKRFNSLATQSDSLLLQLDQILGATESDSE 61

Query: 907  XXXXXXXXXXXLQDLI---------SPKTHPIQPPNPSSPSEILRGFEKIKQLEIELPSG 755
                       L   I           KT  I   +P +P++IL GFE+I+ LE+EL  G
Sbjct: 62   IDSPIASFFRSLFKSIYGLLPSFSKPAKTDEILTRSPKTPAQILAGFERIRNLEVELYGG 121

Query: 754  DLRLEKGTVLRWKAEFGKSLKSCVILAVRSIGGDRDG--------DNGDEIDFNGDNGGG 599
            D++LEKG  ++WKAEFGK+LKSCVI+A RS   +           D G E D   +   G
Sbjct: 122  DVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATESTAVVDGGVESD--SEFVCG 179

Query: 598  LKLRVVWTISALIAASARHYLLREVIREHKEMESLVLRDREGEGRVVM-XXXXXXXXXXX 422
            LK RVVWTISAL+AAS RHYL+R+++++HK+ME L++RDREGEG VVM            
Sbjct: 180  LKTRVVWTISALMAASTRHYLMRDLVKDHKDMEKLIVRDREGEGTVVMDAAGMKEYRETE 239

Query: 421  XXXXEAHISTVGWKNRTTVPAVRMRMRHASSIDLPGGVRIRGATLVIVKPTDGLETMKSE 242
                +  +  VG   RT VP+VRM MRHA S+ L  G+ +  ATLV+V+PT G+ +  ++
Sbjct: 240  ARGDDKTLERVG--ERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPT-GVASDDND 296

Query: 241  VEDQMEDKXXXXXXXXXXXXXXXGTLLKKPSYLLEMNSF 125
            VE  +  +                 LLK+   +LEMNSF
Sbjct: 297  VE--LVTEAFAGDGGDCMYGEAVTALLKRRRNVLEMNSF 333


>ref|NP_565169.1| F-box protein [Arabidopsis thaliana]
            gi|75262248|sp|Q9C9S2.1|FB91_ARATH RecName: Full=F-box
            protein At1g78100 gi|12324249|gb|AAG52096.1|AC012680_7
            unknown protein; 22671-23675 [Arabidopsis thaliana]
            gi|15450976|gb|AAK96759.1| Unknown protein [Arabidopsis
            thaliana] gi|20148731|gb|AAM10256.1| unknown protein
            [Arabidopsis thaliana] gi|332197946|gb|AEE36067.1| F-box
            protein [Arabidopsis thaliana]
          Length = 334

 Score =  225 bits (574), Expect = 2e-56
 Identities = 140/338 (41%), Positives = 198/338 (58%), Gaps = 17/338 (5%)
 Frame = -3

Query: 1087 DGFDRIPDDLILVIFNQLSDIKALTRCRSVSKRFNSLVPQAETLLVKVDCVISSETTDST 908
            D FD IPD +++ I N++ D+K L RCRSVSKRFNSL  Q+E+LL+++D ++ +  +DS 
Sbjct: 2    DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 907  XXXXXXXXXXXLQDLISPKTHPI--QPPN--------PSSPSEILRGFEKIKQLEIELPS 758
                       L   I     PI  +P N        P +P++IL GFE+I+ LE+EL  
Sbjct: 62   IDSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNLEVELYG 121

Query: 757  GDLRLEKGTVLRWKAEFGKSLKSCVILAVRSIGGDRDGDN------GDEIDFNGDNGGGL 596
            GD++LEKG  ++WKAEFGK+LKSCVI+A RS   +              ++ + +   GL
Sbjct: 122  GDVKLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNTSAATEAAAVVDGVVESDSEFVCGL 181

Query: 595  KLRVVWTISALIAASARHYLLREVIREHKEMESLVLRDREGEGRVVMXXXXXXXXXXXXX 416
            K RVVWTISAL+AAS RHYL+R+++++HKEME L++RD +GEG VVM             
Sbjct: 182  KTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTVVMDAAGMKEYRETEV 241

Query: 415  XXEAHIS-TVGWKNRTTVPAVRMRMRHASSIDLPGGVRIRGATLVIVKPTDGLETMKSEV 239
              +   S  VG   RT VP+VRM MRHA S+ L  G+ +  ATLV+V+PT G+ +  ++V
Sbjct: 242  RGDNKESERVG--ERTVVPSVRMSMRHAPSLMLKSGICLEAATLVVVRPT-GVASDDNDV 298

Query: 238  EDQMEDKXXXXXXXXXXXXXXXGTLLKKPSYLLEMNSF 125
            E  +  +                 LLK+   +LEMNSF
Sbjct: 299  E--LVTEAFAGDGDDCMYGEAVTALLKRRRNVLEMNSF 334