BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012207
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|2...   104   2e-20
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    99   9e-19
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    98   2e-18
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    96   1e-17
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    94   3e-17

>ref|XP_002297705.1| predicted protein [Populus trichocarpa] gi|222844963|gb|EEE82510.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  104 bits (259), Expect = 2e-20
 Identities = 64/198 (32%), Positives = 103/198 (52%), Gaps = 16/198 (8%)
 Frame = -2

Query: 733 FDSTVHVYSLSDTKCCTVFDIPYKILK----------RKERGIFLNGALHWAA--VSKSK 590
           F   V VYSL       + D PY +            R+  G+F N A+HW A  V K K
Sbjct: 174 FHCEVKVYSLKSNSWKRIDDYPYDLRFILPPDYHPRCRRGYGVFANSAVHWKATVVGKGK 233

Query: 589 RTST--IVSFNMREKVFKKVRQPYDVSRKAELSVGVLGGQLCMLCKFRLAYIEVWVMKNY 416
              +  IV+F++  + FK + QP   S + E++VGVLGG LC+ C      +E+WVMK Y
Sbjct: 234 ENGSDLIVAFDLGAEEFKIIPQPDYSSNEHEMNVGVLGGCLCVFCNKNCKQVEIWVMKEY 293

Query: 415 GVRDSWSKVCSLEETVMPSFRRLKSSWLCMEGKALLNLRPLCFTKNGE--ILIKDKRDLI 242
           GV++SW+ +C++   +     ++K+ W        L+ RPL ++K G+  +L  D R  +
Sbjct: 294 GVKESWTHLCTVIAQL-----QVKAFW--------LHARPLAYSKGGDKILLELDNRFFV 340

Query: 241 LYDPIEKTARTLKVHGIP 188
            YD   + ++ +++ G P
Sbjct: 341 WYDLRRRKSKIIRIRGAP 358


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 59/190 (31%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
 Frame = -2

Query: 736 SFDSTVHVYSLSDTKCCTVFDIPYKILKRKERGIFLNGALHWAAVSKSK--RTSTIVSFN 563
           SFDS V +Y+L      T+  +PY +   +  G+F+  +LHW    K +  +   I++F+
Sbjct: 170 SFDSQVKLYTLRANAWKTLPSLPYALCCARTMGVFVGNSLHWVVTRKLEPDQPDLIIAFD 229

Query: 562 MREKVFKKVRQPYD--VSRKAELSVGVLGGQLCMLCKFRLAYIEVWVMKNYGVRDSWSKV 389
           +   +F+++  P    V    E+ + +LGG LCM   F    I+VWVM+ Y  RDSW KV
Sbjct: 230 LTHDIFRELPLPDTGGVDGGFEIDLALLGGSLCMTVNFHKTRIDVWVMREYNRRDSWCKV 289

Query: 388 CSLEETVMPSFRRLKSSWLCMEGKALLNLRPLCFTKNGE--ILIKDKRDLILYDPIEKTA 215
            +LEE+               E ++L  +RPL ++ +G   +L  D++ L  YD  +K  
Sbjct: 290 FTLEES--------------REMRSLKCVRPLGYSSDGNKVLLEHDRKRLFWYDLEKKEV 335

Query: 214 RTLKVHGIPD 185
             +K+ G+P+
Sbjct: 336 ALVKIQGLPN 345


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 66/212 (31%), Positives = 110/212 (51%), Gaps = 4/212 (1%)
 Frame = -2

Query: 736 SFDSTVHVYSLSDTKCCTVFDIPYKILKRKERGIFLNGALHWAAVS--KSKRTSTIVSFN 563
           SF+S V VYSL       + D+PY +      G+F NGALHW      +S   + +V+ +
Sbjct: 175 SFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALD 234

Query: 562 MREKVFKKVRQPYDVSRKAELSVGVLGGQLCMLCKFRLAYIEVWVMKNYGVRDSWSKVCS 383
           +  + +++V QP    +   + +GVL G LC L  F    ++VW+MK YGV++SW+K+ S
Sbjct: 235 LGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLFS 294

Query: 382 LEETVMPSFRRLKSSWLCMEGKALLNLRPLCFTKNG-EILIK-DKRDLILYDPIEKTART 209
           + +  +  F R              +L+PL ++K+G E+LI+ D  DL  YD   K  + 
Sbjct: 295 VAQYEVIGFLR--------------SLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN 340

Query: 208 LKVHGIPDWTKLDGNIVTHIASLVPLKSGTYV 113
            ++ GIP   + D    T + SL+ +    ++
Sbjct: 341 -RIPGIPYSFEAD----TFVESLISVSPNRHL 367


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 68/209 (32%), Positives = 105/209 (50%), Gaps = 4/209 (1%)
 Frame = -2

Query: 739 ESFDSTVHVYSLSDTKCCTVFDIPYKILKRKERGIFLNGALHWAAVSKSKRT--STIVSF 566
           +SF+S V V+SL       + D+PY +L   E GI+ NGALHW        T   TIV+ 
Sbjct: 167 KSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHWLVSQDPDSTVADTIVAL 226

Query: 565 NMREKVFKKVRQPYDVSRKAELSVGVLGGQLCMLCKFRLAYIEVWVMKNYGVRDSWSKVC 386
           ++  + +  V +P  V     + VGVL G L +L   R   ++VWVM+ Y V++SWSK+ 
Sbjct: 227 DLGVEDYHVVPKPEFVDMNCNMGVGVLQGCLSLLAYARSERVDVWVMEEYMVKESWSKLF 286

Query: 385 SLEETVMPSFRRLKSSWLCMEGKALLNLRPLCFTKNG-EILIK-DKRDLILYDPIEKTAR 212
           S+    +    R              +L+PL ++K+G E+LI+ D  +L  YD   K   
Sbjct: 287 SVARLEVIGILR--------------SLKPLAYSKSGNEVLIEHDNVNLFWYDLKRKEVV 332

Query: 211 TLKVHGIPDWTKLDGNIVTHIASLVPLKS 125
            + + G+P     +  I   + SLVPL +
Sbjct: 333 NVWIQGVP--ITFEAEIC--VGSLVPLNA 357


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 58/204 (28%), Positives = 108/204 (52%), Gaps = 4/204 (1%)
 Frame = -2

Query: 736 SFDSTVHVYSLSDTKCCTVFDIPYKILKRKERGIFLNGALHWAAVS--KSKRTSTIVSFN 563
           SFDS V +Y++      T+  +PY +   +  G+F++GALHW      + +    IV+F+
Sbjct: 169 SFDSHVKIYTMRTDVWKTLPSMPYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFD 228

Query: 562 MREKVFKKVRQPYDVSRKAELSVGVLGGQLCMLCKFRLAYIEVWVMKNYGVRDSWSKVCS 383
           +R +VF++V  P  V  K ++ V +L G LC++        +VWVM+ YG  DSW K+ +
Sbjct: 229 LRFEVFREVALPGTVDGKFDMDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKMFT 288

Query: 382 LEETVMPSFRRLKSSWLCMEGKALLNLRPLCFTKNGEILI--KDKRDLILYDPIEKTART 209
           + +                + K + +L+PL +++NG+ ++  +D + L  Y+   K    
Sbjct: 289 VGQP--------------RDVKLMKSLKPLGYSRNGDKVLFEQDSKKLCWYNLASKDVSW 334

Query: 208 LKVHGIPDWTKLDGNIVTHIASLV 137
           +++ GIP+   ++G +   + SLV
Sbjct: 335 VRISGIPN--SIEGTVC--VGSLV 354