BLASTX nr result

ID: Cimicifuga21_contig00012181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012181
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]...    75   4e-12
ref|XP_003613325.1| Resistance protein [Medicago truncatula] gi|...    74   2e-11
ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trich...    70   1e-10
ref|XP_002336233.1| cc-nbs-lrr resistance protein [Populus trich...    70   1e-10
ref|XP_003613271.1| NBS-LRR resistance protein [Medicago truncat...    70   2e-10

>ref|XP_003613511.1| NBS resistance protein [Medicago truncatula]
           gi|355514846|gb|AES96469.1| NBS resistance protein
           [Medicago truncatula]
          Length = 1071

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 36/75 (48%), Positives = 49/75 (65%)
 Frame = -3

Query: 227 LLHGKKFLLVLDDVWDDGREKWNKMKYLLTCGNKGSSIIVTTRLPAVVDSITSLQTVIGP 48
           LL GK++LLVLDDVWDD +E W ++KY+L CG KG+S++VTTRLP V   + ++      
Sbjct: 266 LLKGKRYLLVLDDVWDDEQENWQRLKYVLACGGKGASVLVTTRLPKVAAIMGTV------ 319

Query: 47  FTIIINPTHNLDFLS 3
                 P H+L  LS
Sbjct: 320 ------PPHDLSLLS 328


>ref|XP_003613325.1| Resistance protein [Medicago truncatula]
           gi|355514660|gb|AES96283.1| Resistance protein [Medicago
           truncatula]
          Length = 499

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/75 (46%), Positives = 49/75 (65%)
 Frame = -3

Query: 227 LLHGKKFLLVLDDVWDDGREKWNKMKYLLTCGNKGSSIIVTTRLPAVVDSITSLQTVIGP 48
           LL  K++LLVLDDVWDDG+E W ++K +L CG KG+S++VTTRLP V   + ++      
Sbjct: 266 LLRRKRYLLVLDDVWDDGQENWQRLKSVLACGGKGASVLVTTRLPKVAAIMGTM------ 319

Query: 47  FTIIINPTHNLDFLS 3
                 P+H+L  LS
Sbjct: 320 ------PSHDLSMLS 328


>ref|XP_002302909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222844635|gb|EEE82182.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 1075

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = -3

Query: 224 LHGKKFLLVLDDVWDDGREKWNKMKYLLTCGNKGSSIIVTTRLPAV 87
           L+GKKFLLVLDDVWDD  ++WNK+K +L CG KGS++IVTTR+  V
Sbjct: 263 LNGKKFLLVLDDVWDDYDDRWNKLKEVLRCGAKGSAVIVTTRIEMV 308


>ref|XP_002336233.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832784|gb|EEE71261.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 808

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/46 (67%), Positives = 39/46 (84%)
 Frame = -3

Query: 224 LHGKKFLLVLDDVWDDGREKWNKMKYLLTCGNKGSSIIVTTRLPAV 87
           L+GKKFLLVLDDVWDD  ++WNK+K +L CG KGS++IVTTR+  V
Sbjct: 263 LNGKKFLLVLDDVWDDYGDRWNKLKEVLRCGAKGSAVIVTTRIEMV 308


>ref|XP_003613271.1| NBS-LRR resistance protein [Medicago truncatula]
           gi|355514606|gb|AES96229.1| NBS-LRR resistance protein
           [Medicago truncatula]
          Length = 932

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 39/49 (79%)
 Frame = -3

Query: 227 LLHGKKFLLVLDDVWDDGREKWNKMKYLLTCGNKGSSIIVTTRLPAVVD 81
           LL GK+FLLVLDDVWDD +E W +++ +L CG KG+SI+VTTRL  V +
Sbjct: 251 LLQGKRFLLVLDDVWDDKQENWQRLRSVLACGGKGASILVTTRLAKVAE 299


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