BLASTX nr result

ID: Cimicifuga21_contig00012179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012179
         (1159 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299919.1| cc-nbs-lrr resistance protein [Populus trich...   156   1e-35
emb|CBI40193.3| unnamed protein product [Vitis vinifera]              150   6e-34
ref|XP_002268644.2| PREDICTED: putative disease resistance prote...   147   5e-33
ref|XP_002513078.1| leucine-rich repeat-containing protein, puta...   146   1e-32
ref|XP_003598782.1| NB-LRR type disease resistance protein Rps1-...   145   1e-32

>ref|XP_002299919.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222847177|gb|EEE84724.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1418

 Score =  156 bits (394), Expect = 1e-35
 Identities = 102/269 (37%), Positives = 146/269 (54%), Gaps = 13/269 (4%)
 Frame = -3

Query: 1154 MPSGIGKLTGLQTLSVFIVGPESE--LKELKDLNNIRGSLCIKQLEKVSNPEEAEEANLV 981
            MPS +G LTGLQ LS F VG +    ++EL+ L N+ G L I  L  V +   A  ANL 
Sbjct: 673  MPSWMGNLTGLQKLSKFTVGKKEGCGIEELRGLQNLEGRLSIMALHNVIDARHAVHANLR 732

Query: 980  DKKSLERLELQWSYT----VDPHHGRNVLTKLKPHECLRELELRKYGGDTFPTWVSNPSF 813
             K +L+ LEL+WS +     D  H   VL  L+PH  L+EL++  YGG  FP+WV +PSF
Sbjct: 733  GKHNLDELELEWSKSDIKDEDRQHQMLVLDSLQPHTNLKELKISFYGGTEFPSWVGHPSF 792

Query: 812  SKLTDIFMYECENCVIXXXXXXXXXXKNLIIAEMDKLENVDNTFCGNGTGM-GFPSLQTL 636
            SK+  + +  C  C +          ++L I  +D +E V + F G+ + +  FPSL+TL
Sbjct: 793  SKIVHLKLSCCRKCTVLPPLGRLPLLRDLCIQGLDAVETVGHEFYGDCSSVKPFPSLKTL 852

Query: 635  QFSDMPRLKSWSGLG-----ENDMASLCKLTIIKCPQLM-ILPSLHCLGSLQDLEFYDCP 474
             F DM   KSWS +G     E    SL +LT+  CP+L+   PS  CL S   +    CP
Sbjct: 853  TFEDMQEWKSWSAVGVDGEAEEQFPSLSELTLWNCPKLLGRFPS--CLPSCVKITIAKCP 910

Query: 473  LIPSLPNEGLPSSVQWLVIVECPKLKDRC 387
            ++    +E LP   + L + EC ++K +C
Sbjct: 911  MLVD-SDEKLPVLGE-LKLEECDEVKPKC 937


>emb|CBI40193.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score =  150 bits (379), Expect = 6e-34
 Identities = 102/279 (36%), Positives = 151/279 (54%), Gaps = 10/279 (3%)
 Frame = -3

Query: 1154 MPSGIGKLTGLQTLSVFIVGPESEL--KELKDLNNIRGSLCIKQLEKVSNPEEAEEANLV 981
            MP  +GKL  LQTLS FIVG   EL  KEL DL ++RG L I  L+ V + ++A +ANL 
Sbjct: 352  MPPQMGKLKSLQTLSKFIVGKSKELGIKELGDLLHLRGKLSILDLQNVVDIQDARDANLK 411

Query: 980  DKKSLERLELQWSYTV-DPHHGR----NVLTKLKPHECLRELELRKYGGDTFPTWVSNPS 816
            DK  LE L ++WS  + D         NVL  L+P+  L++L ++ YGG TFP W+ +PS
Sbjct: 412  DKHHLEELLMEWSSNMFDDSQNETIELNVLHFLQPNTNLKKLTIQSYGGLTFPYWIGDPS 471

Query: 815  FSKLTDIFMYECENCVIXXXXXXXXXXKNLIIAEMDKLENVDNTFCGNGT--GMGFPSLQ 642
            FSK+  + +  C  C +          K L +  M  +++V   F G  +     FPSL+
Sbjct: 472  FSKMVCLELNYCRKCTLLPSLGRLSSLKKLCVKGMQGVKSVGIEFYGEPSLCVKPFPSLE 531

Query: 641  TLQFSDMPRLKSWSGLGENDMASLCKLTIIKCPQLMILPSLHCLGSLQDLEFYDCP-LIP 465
             L+F DMP  + W          L +L I  CP+L+     H L SL  L+  DCP L+ 
Sbjct: 532  FLRFEDMPEWEEW--CSSESYPRLRELEIHHCPKLIQKLPSH-LPSLVKLDIIDCPKLVA 588

Query: 464  SLPNEGLPSSVQWLVIVECPKLKDRCNAGGEDWTKIKDI 348
             LPN+ LP ++++L I +C  L ++   G +  T ++++
Sbjct: 589  PLPNQPLPCNLEYLEINKCASL-EKLPIGLQSLTSLREL 626


>ref|XP_002268644.2| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1359

 Score =  147 bits (371), Expect = 5e-33
 Identities = 102/275 (37%), Positives = 147/275 (53%), Gaps = 15/275 (5%)
 Frame = -3

Query: 1154 MPSGIGKLTGLQTLSVFIVGPESE--LKELKDLNNIRGSLCIKQLEKVSNPEEAEEANLV 981
            MPS IG L  LQ LS FIVG +S   + ELK+L++I+G+L I +L+ V    +A EANL 
Sbjct: 663  MPSHIGHLKCLQNLSDFIVGQKSRSGIGELKELSDIKGTLRISKLQNVKCGRDAREANLK 722

Query: 980  DKKSLERLELQWSYTVDPH-HGRNVLTKLKPHECLRELELRKYGGDTFPTWVSNPSFSKL 804
            DK  +E L L W +  D      +++  L+PH  L+ L + ++GG  FPTWV+NP FS L
Sbjct: 723  DKMYMEELVLDWDWRADDIIQDGDIIDNLRPHTNLKRLSINRFGGSRFPTWVANPFFSNL 782

Query: 803  TDIFMYECENCVIXXXXXXXXXXKNLIIAEMDKLENVDNTFCGNGTGM-------GFPSL 645
              + +++C+NC+           ++L I+ M+ +E V + F   G           FPSL
Sbjct: 783  QTLELWKCKNCLSLPPLGQLPSLEHLRISGMNGIERVGSEFYHYGNASSSIVVKPSFPSL 842

Query: 644  QTLQFSDMPRLKSW--SGLGENDMASLCKLTIIKCPQLM-ILPSLHCLGSLQDLEFYDCP 474
            QTL F  M   + W   G    +   L +L II CP+L   LP    L SL+ LE   CP
Sbjct: 843  QTLIFECMHNWEKWLYCGCRRGEFPRLQELYIINCPKLTGKLPKQ--LRSLKKLEIVGCP 900

Query: 473  --LIPSLPNEGLPSSVQWLVIVECPKLKDRCNAGG 375
              L+PSL       ++  L +V+C KL+ +  A G
Sbjct: 901  QLLVPSL----RVPAISELTMVDCGKLQLKRPASG 931


>ref|XP_002513078.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
            gi|223548089|gb|EEF49581.1| leucine-rich
            repeat-containing protein, putative [Ricinus communis]
          Length = 1096

 Score =  146 bits (368), Expect = 1e-32
 Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 5/258 (1%)
 Frame = -3

Query: 1157 SMPSGIGKLTGLQTLSVFIVGP--ESELKELKDLNNIRGSLCIKQLEKVSNPEEAEEANL 984
            SMP   GKLT LQ L  F+VG   E  L ELK++N +R +LCI ++E V N E+A+E +L
Sbjct: 653  SMPPSFGKLTSLQRLHRFVVGKGVECGLNELKNMNELRDTLCIDRVEDVLNIEDAKEVSL 712

Query: 983  VDKKSLERLELQWS---YTVDPHHGRNVLTKLKPHECLRELELRKYGGDTFPTWVSNPSF 813
              K+ + +L L+WS   Y+ D      +L  L+PH  LREL +  Y G  FP W+ N   
Sbjct: 713  KSKQYIHKLVLRWSRSQYSQDAID-EELLEYLEPHTNLRELMVDVYPGTRFPKWMGNSLL 771

Query: 812  SKLTDIFMYECENCVIXXXXXXXXXXKNLIIAEMDKLENVDNTFCGNGTGMGFPSLQTLQ 633
            S L  I    C +C            K+L I+ M +LE++   F G G   GFPSL+ L+
Sbjct: 772  SHLESIEFIHCNHCKTLPPLGQLPFLKSLTISMMQELESIGREFYGEGKIKGFPSLKILK 831

Query: 632  FSDMPRLKSWSGLGENDMASLCKLTIIKCPQLMILPSLHCLGSLQDLEFYDCPLIPSLPN 453
              DM RLK W  + + +   L +L ++ CP ++ LP      +L+DL   +C       +
Sbjct: 832  LEDMIRLKKWQEIDQGEFPVLQQLALLNCPNVINLPR---FPALEDLLLDNC-------H 881

Query: 452  EGLPSSVQWLVIVECPKL 399
            E + SSV +L+ V   K+
Sbjct: 882  ETVLSSVHFLISVSSLKI 899



 Score = 74.7 bits (182), Expect = 4e-11
 Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
 Frame = -3

Query: 650  SLQTLQFSDMPRLKSWSGLGENDMASLCKLTIIKCPQLMILPS-LHCLGSLQDLEFYDCP 474
            SLQ L  S+  +L S+  L +    SL  L I  C  L  LP+ LH L +L+ L    C 
Sbjct: 991  SLQELNISNCCKLLSFKTLPQ----SLKNLRISACANLESLPTNLHELTNLEYLSIQSCQ 1046

Query: 473  LIPSLPNEGLPSSVQWLVIVECPKLKDRCNAGGEDWTKIKDIPNRLIK 330
             + SLP  GLPS ++ L I+EC  L++RC  GGEDW KI+ IP + I+
Sbjct: 1047 KLASLPVSGLPSCLRSLSIMECASLEERCAEGGEDWPKIQHIPKKSIR 1094


>ref|XP_003598782.1| NB-LRR type disease resistance protein Rps1-k-2 [Medicago truncatula]
            gi|355487830|gb|AES69033.1| NB-LRR type disease
            resistance protein Rps1-k-2 [Medicago truncatula]
          Length = 1248

 Score =  145 bits (367), Expect = 1e-32
 Identities = 93/252 (36%), Positives = 134/252 (53%), Gaps = 10/252 (3%)
 Frame = -3

Query: 1154 MPSGIGKLTGLQTLSVFIVGPESE--LKELKDLNNIRGSLCIKQLEKVSNPEEAEEANLV 981
            MP G+ KL  L  LS FIVG + E  +KEL  L+N+ GSL I++LE V N  EA EA ++
Sbjct: 653  MPKGMSKLNQLHHLSYFIVGKQEEDSIKELGGLSNLHGSLSIRKLENVRNGSEALEAKMM 712

Query: 980  DKKSLERLELQWSYTVDPHHGR---NVLTKLKPHECLRELELRKYGGDTFPTWVSNPSFS 810
            DKK +  L L+W  + D    +   ++L KL+P++ L+ L +  Y G  FP W+ NPS+ 
Sbjct: 713  DKKQINNLFLEWFSSDDCTDSQTEIDILCKLQPYQDLKLLSINGYRGTRFPDWIGNPSYH 772

Query: 809  KLTDIFMYECENCVIXXXXXXXXXXKNLIIAEMDKLENVDNTFCGNGTGMG----FPSLQ 642
             +T + +  CENC +          K L I++++ LE +D +F  NG        FP L+
Sbjct: 773  NMTSLTISSCENCCLLPSLGQLTTLKYLTISDLNGLETIDGSFYKNGDSSSSVTPFPLLE 832

Query: 641  TLQFSDMPRLKSWSGLGENDMASLCKLTIIKCPQLMILPSLHCLGSLQDLEFYDCP-LIP 465
             L+F +MP  K W          L +LTI  CP+L     +H L SL+ L    C  L+ 
Sbjct: 833  FLEFENMPCWKVWHSSESYAFPQLKRLTIENCPKLRGDLPVH-LPSLKTLAIRSCEHLVS 891

Query: 464  SLPNEGLPSSVQ 429
            SLP      S+Q
Sbjct: 892  SLPKAPSVLSLQ 903


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