BLASTX nr result

ID: Cimicifuga21_contig00012167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012167
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3...   186   1e-45
ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3...   183   1e-44
gb|ADW66590.1| multidrug resistace protein [Hirschfeldia incana]      183   1e-44
gb|AAC49791.1| MRP-like ABC transporter [Arabidopsis thaliana]        182   2e-44
ref|NP_974299.1| ABC transporter C family member 3 [Arabidopsis ...   182   2e-44

>ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 2054

 Score =  186 bits (473), Expect = 1e-45
 Identities = 93/134 (69%), Positives = 104/134 (77%)
 Frame = +2

Query: 2    LHDLWMVPLQVILSLLILYKNLGLASIAAFVATVLVMLVNFPFGKLQETFQENLMKSKDG 181
            +HDLWMV LQV L+LLILYKNLGLASIAAFVATV +ML N P G LQE FQ+ LM+SKD 
Sbjct: 975  MHDLWMVALQVTLALLILYKNLGLASIAAFVATVAIMLANVPLGSLQEKFQKKLMESKDT 1034

Query: 182  RMKGTSEILRNMRILKLQSWEMKFLSKVVELRKNEEGWLRKYLXXXXXXXXXXXXXXXLV 361
            RMK TSEILRNMRILKLQ WEMKFLSK+ ELRKNE+GWL+KY+                V
Sbjct: 1035 RMKATSEILRNMRILKLQGWEMKFLSKITELRKNEQGWLKKYVYTAAVTTFVFWGSPTFV 1094

Query: 362  SIVTFGACVLMGIP 403
            S+VTFG C+LMGIP
Sbjct: 1095 SVVTFGTCMLMGIP 1108


>ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1493

 Score =  183 bits (465), Expect = 1e-44
 Identities = 91/134 (67%), Positives = 104/134 (77%)
 Frame = +2

Query: 2   LHDLWMVPLQVILSLLILYKNLGLASIAAFVATVLVMLVNFPFGKLQETFQENLMKSKDG 181
           +HDLWMV LQV L+LLILYKNLGLASIAAFVATV++ML N P G LQE FQ+ LM+SKD 
Sbjct: 414 MHDLWMVVLQVTLALLILYKNLGLASIAAFVATVIIMLANVPLGSLQEKFQKKLMESKDT 473

Query: 182 RMKGTSEILRNMRILKLQSWEMKFLSKVVELRKNEEGWLRKYLXXXXXXXXXXXXXXXLV 361
           RMK TSEILRNMRILKLQ WEMKFL K+ ELRKNE+GWL+KY+                V
Sbjct: 474 RMKATSEILRNMRILKLQGWEMKFLLKITELRKNEQGWLKKYVYTAALTTFVFWGSPTFV 533

Query: 362 SIVTFGACVLMGIP 403
           S+VTFG C+L+GIP
Sbjct: 534 SVVTFGTCMLIGIP 547


>gb|ADW66590.1| multidrug resistace protein [Hirschfeldia incana]
          Length = 175

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/134 (67%), Positives = 107/134 (79%)
 Frame = +2

Query: 2   LHDLWMVPLQVILSLLILYKNLGLASIAAFVATVLVMLVNFPFGKLQETFQENLMKSKDG 181
           +HD WMV LQV L+L ILY+NLGLASIAA +AT+LVMLVNFPFG++QE FQE LM++KD 
Sbjct: 26  MHDPWMVLLQVGLALWILYRNLGLASIAALIATILVMLVNFPFGRMQERFQEKLMEAKDN 85

Query: 182 RMKGTSEILRNMRILKLQSWEMKFLSKVVELRKNEEGWLRKYLXXXXXXXXXXXXXXXLV 361
           RMK TSEILRNMRILKLQ WEMKFLSK+ +LRK+EEGWL+KY+               LV
Sbjct: 86  RMKSTSEILRNMRILKLQGWEMKFLSKIFDLRKSEEGWLKKYVYNSAVISFVFWGAPTLV 145

Query: 362 SIVTFGACVLMGIP 403
           S+ TFGAC+L+GIP
Sbjct: 146 SVSTFGACILLGIP 159


>gb|AAC49791.1| MRP-like ABC transporter [Arabidopsis thaliana]
          Length = 1515

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/134 (66%), Positives = 107/134 (79%)
 Frame = +2

Query: 2   LHDLWMVPLQVILSLLILYKNLGLASIAAFVATVLVMLVNFPFGKLQETFQENLMKSKDG 181
           +HD WMV LQV L+L ILY+NLGLASIAA VAT++VML+NFPFG++QE FQE LM++KD 
Sbjct: 441 MHDPWMVLLQVGLALWILYRNLGLASIAALVATIIVMLINFPFGRMQERFQEKLMEAKDS 500

Query: 182 RMKGTSEILRNMRILKLQSWEMKFLSKVVELRKNEEGWLRKYLXXXXXXXXXXXXXXXLV 361
           RMK TSEILRNMRILKLQ WEMKFLSK+ +LRK+EEGWL+KY+               LV
Sbjct: 501 RMKSTSEILRNMRILKLQGWEMKFLSKIFDLRKSEEGWLKKYVYNSAVISFVFWGAPTLV 560

Query: 362 SIVTFGACVLMGIP 403
           S+ TFGAC+L+GIP
Sbjct: 561 SVSTFGACILLGIP 574


>ref|NP_974299.1| ABC transporter C family member 3 [Arabidopsis thaliana]
           gi|42572409|ref|NP_974300.1| ABC transporter C family
           member 3 [Arabidopsis thaliana]
           gi|332641772|gb|AEE75293.1| ABC transporter C family
           member 3 [Arabidopsis thaliana]
           gi|332641773|gb|AEE75294.1| ABC transporter C family
           member 3 [Arabidopsis thaliana]
          Length = 1120

 Score =  182 bits (463), Expect = 2e-44
 Identities = 89/134 (66%), Positives = 107/134 (79%)
 Frame = +2

Query: 2   LHDLWMVPLQVILSLLILYKNLGLASIAAFVATVLVMLVNFPFGKLQETFQENLMKSKDG 181
           +HD WMV LQV L+L ILY+NLGLASIAA VAT++VML+NFPFG++QE FQE LM++KD 
Sbjct: 441 MHDPWMVLLQVGLALWILYRNLGLASIAALVATIIVMLINFPFGRMQERFQEKLMEAKDS 500

Query: 182 RMKGTSEILRNMRILKLQSWEMKFLSKVVELRKNEEGWLRKYLXXXXXXXXXXXXXXXLV 361
           RMK TSEILRNMRILKLQ WEMKFLSK+ +LRK+EEGWL+KY+               LV
Sbjct: 501 RMKSTSEILRNMRILKLQGWEMKFLSKIFDLRKSEEGWLKKYVYNSAVISFVFWGAPTLV 560

Query: 362 SIVTFGACVLMGIP 403
           S+ TFGAC+L+GIP
Sbjct: 561 SVSTFGACILLGIP 574


Top