BLASTX nr result

ID: Cimicifuga21_contig00012148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012148
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284752.1| PREDICTED: electron transfer flavoprotein su...   438   e-121
gb|ABK96546.1| unknown [Populus trichocarpa x Populus deltoides]      424   e-116
ref|XP_004134069.1| PREDICTED: electron transfer flavoprotein su...   422   e-116
ref|XP_003536247.1| PREDICTED: electron transfer flavoprotein su...   418   e-114
ref|XP_002529294.1| electron transfer flavoprotein beta-subunit,...   417   e-114

>ref|XP_002284752.1| PREDICTED: electron transfer flavoprotein subunit beta,
           mitochondrial [Vitis vinifera]
           gi|296083620|emb|CBI23609.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  438 bits (1127), Expect = e-121
 Identities = 220/251 (87%), Positives = 239/251 (95%)
 Frame = -1

Query: 904 MKIMVAVKRVIDYAVKIRVKSDKTGVETNNIKMSMNPFCEIALEEALRIKESGFATEVIA 725
           MKIMVA+KRV+DYAVKIRVKSDK+GVET+N+KMSMNPFCEI LEEALRIKESG A+EVIA
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKSDKSGVETSNVKMSMNPFCEIGLEEALRIKESGLASEVIA 60

Query: 724 VSLGPTQCVDTLRTGLAMGADRAIHVDTSATLFPLSVAKILKKLVDMEKPGLLILGKQAI 545
           VS+GP+QCVDTLRTGLAMGADRAIHV+ SATL+PLSVAK+LK LVD+EKPGLLILGKQAI
Sbjct: 61  VSVGPSQCVDTLRTGLAMGADRAIHVEASATLYPLSVAKLLKALVDVEKPGLLILGKQAI 120

Query: 544 DDDCNQTGQMAAGLLKWPQGTFASKVVLDKEKQVVTVEREVDGGLETLCLDLPAVITTDL 365
           DDDCNQTGQM AGLL WPQGTFASKVVLDKEK+V TVEREVDGGLETLCLDLPAVITTDL
Sbjct: 121 DDDCNQTGQMVAGLLNWPQGTFASKVVLDKEKEVATVEREVDGGLETLCLDLPAVITTDL 180

Query: 364 RLNQPRYATLPNIMKAKSKVIRKITLEELGVEIKPDLEIVQITEPPKRKAGVIVSSVDEL 185
           RLNQPRYATLPNIMKAKSKVI+K T +EL V+IK DLE+VQ+TEPPKRKAGVIVSSVDEL
Sbjct: 181 RLNQPRYATLPNIMKAKSKVIKKFTPQELNVDIKSDLEVVQVTEPPKRKAGVIVSSVDEL 240

Query: 184 IDKLKTEAHVI 152
           ID+LK EAHVI
Sbjct: 241 IDQLKNEAHVI 251


>gb|ABK96546.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 251

 Score =  424 bits (1090), Expect = e-116
 Identities = 210/251 (83%), Positives = 235/251 (93%)
 Frame = -1

Query: 904 MKIMVAVKRVIDYAVKIRVKSDKTGVETNNIKMSMNPFCEIALEEALRIKESGFATEVIA 725
           MKIMVA+KRV+DYAVKIRVKSDK+GVET N+KMSMNPFCEIALEEALRIK+SG A+EV+A
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKSDKSGVETQNVKMSMNPFCEIALEEALRIKQSGLASEVVA 60

Query: 724 VSLGPTQCVDTLRTGLAMGADRAIHVDTSATLFPLSVAKILKKLVDMEKPGLLILGKQAI 545
           VS+G TQCVDTLRTGLAMGADR IHV++SA LFPL+VAK+LK LV++EKPGL+ILGKQAI
Sbjct: 61  VSMGSTQCVDTLRTGLAMGADRGIHVESSAALFPLTVAKLLKALVEVEKPGLIILGKQAI 120

Query: 544 DDDCNQTGQMAAGLLKWPQGTFASKVVLDKEKQVVTVEREVDGGLETLCLDLPAVITTDL 365
           DDDCNQTGQM AGLL WPQGTFASKV+LD EKQV TVEREVD GLETLCLDLPAVITTDL
Sbjct: 121 DDDCNQTGQMVAGLLGWPQGTFASKVLLDTEKQVATVEREVDDGLETLCLDLPAVITTDL 180

Query: 364 RLNQPRYATLPNIMKAKSKVIRKITLEELGVEIKPDLEIVQITEPPKRKAGVIVSSVDEL 185
           RLNQPRYATLPNIMKAKSKVI+K T +EL VE+K D+E+V++TEPPKRKAGVI+SSVDEL
Sbjct: 181 RLNQPRYATLPNIMKAKSKVIKKYTPQELNVEVKSDIEVVEVTEPPKRKAGVIISSVDEL 240

Query: 184 IDKLKTEAHVI 152
           IDKL+ EAHVI
Sbjct: 241 IDKLRNEAHVI 251


>ref|XP_004134069.1| PREDICTED: electron transfer flavoprotein subunit beta,
           mitochondrial-like [Cucumis sativus]
           gi|449525930|ref|XP_004169969.1| PREDICTED: electron
           transfer flavoprotein subunit beta, mitochondrial-like
           [Cucumis sativus]
          Length = 251

 Score =  422 bits (1085), Expect = e-116
 Identities = 207/251 (82%), Positives = 234/251 (93%)
 Frame = -1

Query: 904 MKIMVAVKRVIDYAVKIRVKSDKTGVETNNIKMSMNPFCEIALEEALRIKESGFATEVIA 725
           MKIMVA+KRV+DYAVKIRVK D+TGVET N+KMSMNPFCEIA+EEALRIKE+G A+EV+A
Sbjct: 1   MKIMVAIKRVVDYAVKIRVKPDRTGVETQNVKMSMNPFCEIAIEEALRIKEAGLASEVVA 60

Query: 724 VSLGPTQCVDTLRTGLAMGADRAIHVDTSATLFPLSVAKILKKLVDMEKPGLLILGKQAI 545
           VS+GP QCVDTLRTGLAMGADR IHV+ +A L+PLSVAKILK LV++EKPGLL+LGKQAI
Sbjct: 61  VSMGPVQCVDTLRTGLAMGADRGIHVEATAPLYPLSVAKILKALVEVEKPGLLLLGKQAI 120

Query: 544 DDDCNQTGQMAAGLLKWPQGTFASKVVLDKEKQVVTVEREVDGGLETLCLDLPAVITTDL 365
           DDDCNQTGQM AGLL WPQGTFASKVV+DKEKQ VTV+REVD GLETLCL+LPAVITTDL
Sbjct: 121 DDDCNQTGQMVAGLLNWPQGTFASKVVIDKEKQEVTVDREVDDGLETLCLNLPAVITTDL 180

Query: 364 RLNQPRYATLPNIMKAKSKVIRKITLEELGVEIKPDLEIVQITEPPKRKAGVIVSSVDEL 185
           RLNQPRYATLPNIMKAKSK I+K T +EL V++KPDLE+V++TEPPKRKAG+I+SSVDEL
Sbjct: 181 RLNQPRYATLPNIMKAKSKPIKKFTPQELNVDVKPDLEVVEVTEPPKRKAGIILSSVDEL 240

Query: 184 IDKLKTEAHVI 152
           IDKLK EAHVI
Sbjct: 241 IDKLKNEAHVI 251


>ref|XP_003536247.1| PREDICTED: electron transfer flavoprotein subunit beta,
           mitochondrial-like [Glycine max]
          Length = 253

 Score =  418 bits (1074), Expect = e-114
 Identities = 210/251 (83%), Positives = 236/251 (94%)
 Frame = -1

Query: 904 MKIMVAVKRVIDYAVKIRVKSDKTGVETNNIKMSMNPFCEIALEEALRIKESGFATEVIA 725
           MKIMVA+KRV+DYAVKIRVK DKTGV T+N+KMSMNPFCEIALEEALRI+ESG A+EV+A
Sbjct: 3   MKIMVAIKRVVDYAVKIRVKGDKTGVVTHNVKMSMNPFCEIALEEALRIRESGLASEVVA 62

Query: 724 VSLGPTQCVDTLRTGLAMGADRAIHVDTSATLFPLSVAKILKKLVDMEKPGLLILGKQAI 545
           V++GP+Q VDTLRTGLAMGADR IHV+++A+L+PLSVAKIL+KLV++EKPGLLILGKQAI
Sbjct: 63  VTMGPSQSVDTLRTGLAMGADRGIHVESTASLYPLSVAKILRKLVEIEKPGLLILGKQAI 122

Query: 544 DDDCNQTGQMAAGLLKWPQGTFASKVVLDKEKQVVTVEREVDGGLETLCLDLPAVITTDL 365
           DDDCNQTGQM AGLL WPQGTFASKVVLDKEKQV TV+REVD G+ET+CL+LPAVITTDL
Sbjct: 123 DDDCNQTGQMIAGLLNWPQGTFASKVVLDKEKQVATVDREVDDGIETVCLNLPAVITTDL 182

Query: 364 RLNQPRYATLPNIMKAKSKVIRKITLEELGVEIKPDLEIVQITEPPKRKAGVIVSSVDEL 185
           RLNQPRYATLPNIMKAKSK I+K T EEL VEIK DLEIVQ+TEPPKRKAGVI+SSVDEL
Sbjct: 183 RLNQPRYATLPNIMKAKSKPIKKFTPEELNVEIKSDLEIVQVTEPPKRKAGVILSSVDEL 242

Query: 184 IDKLKTEAHVI 152
           IDKLK EA+VI
Sbjct: 243 IDKLKHEANVI 253


>ref|XP_002529294.1| electron transfer flavoprotein beta-subunit, putative [Ricinus
           communis] gi|223531218|gb|EEF33063.1| electron transfer
           flavoprotein beta-subunit, putative [Ricinus communis]
          Length = 251

 Score =  417 bits (1072), Expect = e-114
 Identities = 208/251 (82%), Positives = 230/251 (91%)
 Frame = -1

Query: 904 MKIMVAVKRVIDYAVKIRVKSDKTGVETNNIKMSMNPFCEIALEEALRIKESGFATEVIA 725
           MKI+VAVKRV+DYAVKIRVK DK+GVET N+KMSMNPFCEIALEEALRIKE+G A+EV+A
Sbjct: 1   MKILVAVKRVVDYAVKIRVKPDKSGVETQNVKMSMNPFCEIALEEALRIKEAGLASEVVA 60

Query: 724 VSLGPTQCVDTLRTGLAMGADRAIHVDTSATLFPLSVAKILKKLVDMEKPGLLILGKQAI 545
           VS+GP  CVDTLRTGLAMGADR IHV+ +  L+PL+VAK+LK LV +EKPGL+I+GKQAI
Sbjct: 61  VSMGPKHCVDTLRTGLAMGADRGIHVEANEALYPLTVAKVLKALVALEKPGLIIMGKQAI 120

Query: 544 DDDCNQTGQMAAGLLKWPQGTFASKVVLDKEKQVVTVEREVDGGLETLCLDLPAVITTDL 365
           DDDCNQTGQM AGLL WPQGTFASKV+LDKEKQV TVEREVDGGLETLCLDLPAVITTDL
Sbjct: 121 DDDCNQTGQMVAGLLGWPQGTFASKVLLDKEKQVATVEREVDGGLETLCLDLPAVITTDL 180

Query: 364 RLNQPRYATLPNIMKAKSKVIRKITLEELGVEIKPDLEIVQITEPPKRKAGVIVSSVDEL 185
           RLNQPRYATLPNIMKAKSKVI+K T EEL VE K D+EI+++TEPPKRKAGVIVSSVDEL
Sbjct: 181 RLNQPRYATLPNIMKAKSKVIKKYTPEELNVETKSDIEIIEVTEPPKRKAGVIVSSVDEL 240

Query: 184 IDKLKTEAHVI 152
           IDKLK EA VI
Sbjct: 241 IDKLKNEARVI 251


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