BLASTX nr result

ID: Cimicifuga21_contig00012143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012143
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   204   5e-51
ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   204   5e-51
ref|XP_004138372.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   201   7e-50
ref|XP_004165149.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   199   1e-49
ref|XP_004149157.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   199   1e-49

>ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/125 (80%), Positives = 105/125 (84%), Gaps = 5/125 (4%)
 Frame = +2

Query: 2   TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 181
           TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ
Sbjct: 127 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 186

Query: 182 MRGTILLGKKWDVMVDLFFYREPEEAKEQEEDGIVAPPNYGTTKY-----ATSDQMHVQG 346
           MRGTI  G +WDVMVDLFFYREPEEAKE+EE+  VAPP+YG   Y       SDQ   Q 
Sbjct: 187 MRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWAGQI 246

Query: 347 VDSQW 361
            D+QW
Sbjct: 247 SDAQW 251


>ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/125 (80%), Positives = 105/125 (84%), Gaps = 5/125 (4%)
 Frame = +2

Query: 2   TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 181
           TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ
Sbjct: 127 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 186

Query: 182 MRGTILLGKKWDVMVDLFFYREPEEAKEQEEDGIVAPPNYGTTKY-----ATSDQMHVQG 346
           MRGTI  G +WDVMVDLFFYREPEEAKE+EE+  VAPP+YG   Y       SDQ   Q 
Sbjct: 187 MRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWAGQI 246

Query: 347 VDSQW 361
            D+QW
Sbjct: 247 SDAQW 251


>ref|XP_004138372.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 308

 Score =  201 bits (510), Expect = 7e-50
 Identities = 98/124 (79%), Positives = 104/124 (83%), Gaps = 4/124 (3%)
 Frame = +2

Query: 2   TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 181
           TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ
Sbjct: 128 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 187

Query: 182 MRGTILLGKKWDVMVDLFFYREPEEAKEQEEDGIVAPPNYGTTKYA----TSDQMHVQGV 349
           MRGTI  G KWDVMVDLFFYREPEEAKE EE+  + P ++G   Y+    TSDQ   Q  
Sbjct: 188 MRGTIRAGHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPLTSDQWTSQIP 247

Query: 350 DSQW 361
           D+QW
Sbjct: 248 DAQW 251


>ref|XP_004165149.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 298

 Score =  199 bits (507), Expect = 1e-49
 Identities = 96/121 (79%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 181
           TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ
Sbjct: 127 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 186

Query: 182 MRGTILLGKKWDVMVDLFFYREPEEAKEQEEDGIVAPPNYGTTKYATSDQMHVQGV-DSQ 358
           MRGT+  G KWDVMVDLFFYREPEE KE+EE+  VAPP+YG   + ++     Q V D+Q
Sbjct: 187 MRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQWVPDAQ 246

Query: 359 W 361
           W
Sbjct: 247 W 247


>ref|XP_004149157.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 298

 Score =  199 bits (507), Expect = 1e-49
 Identities = 96/121 (79%), Positives = 104/121 (85%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 181
           TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ
Sbjct: 127 TDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQ 186

Query: 182 MRGTILLGKKWDVMVDLFFYREPEEAKEQEEDGIVAPPNYGTTKYATSDQMHVQGV-DSQ 358
           MRGT+  G KWDVMVDLFFYREPEE KE+EE+  VAPP+YG   + ++     Q V D+Q
Sbjct: 187 MRGTVRPGYKWDVMVDLFFYREPEEVKEKEEEEAVAPPDYGIADFGSAPVAVDQWVPDAQ 246

Query: 359 W 361
           W
Sbjct: 247 W 247


Top