BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012130
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26947.3| unnamed protein product [Vitis vinifera]              229   2e-58
ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containi...   229   2e-58
emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]   229   2e-58
ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   185   4e-45
ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   185   4e-45

>emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/166 (65%), Positives = 136/166 (81%)
 Frame = -1

Query: 499 PGFKRSELAFCTILEILAEKELMRLAYAVMEKVVHIDLHGIVDVLIDGYVKPEASVKLLD 320
           PGF+RSE  FC ILEILA+  LMR AY VME+V++ ++H IVDVLI G V  E SVK+LD
Sbjct: 109 PGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILD 168

Query: 319 LLLWIYTKGSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEF 140
           LL+W+Y+K SM E CLS FDKMI++ LSPDV+NCNRILR+L + +L+SKA E+Y+ M EF
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 139 GIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           GI+PTIVTYNTLL ++CK G+ Q+ + LLSEMQ RGCAPN+VTYNV
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 45/85 (52%)
 Frame = -1

Query: 259 KMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEFGIRPTIVTYNTLLGTFCKEG 80
           KM+ +G+ PD      I+     +  L K REI+  M   G+ P++VTY  L+     +G
Sbjct: 539 KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKG 598

Query: 79  EGQEAVHLLSEMQERGCAPNNVTYN 5
             + A    SEMQE+G  PN +TYN
Sbjct: 599 RLERAFIYFSEMQEKGILPNVITYN 623



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/98 (35%), Positives = 51/98 (52%)
 Frame = -1

Query: 295 GSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEFGIRPTIVT 116
           G M++  +     M+ N L PDV + N ++        L KA  ++  +    + PTIVT
Sbjct: 353 GRMSD-AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 115 YNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           YNTLL   C++GE + A  L  EM   G AP+ VTY +
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
 Frame = -1

Query: 463 ILEILAEKELMRLAYAVMEKVVHIDLHGIV---DVLIDGYVKPEASVKLLDLLLWIYTKG 293
           IL IL +K+LM  A  V   +    +   +   + L+D Y K     + LDLL  +  +G
Sbjct: 205 ILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG 264

Query: 292 SMT------------------ELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAR 167
                                E       +M++ GL       N ++    N  +L++A 
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 166 EIYKAMTEFGIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYN 5
            + + M   G  PT+ TYN+ +   CK G   +A+  LS+M      P+ V+YN
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYN 378


>ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/166 (65%), Positives = 136/166 (81%)
 Frame = -1

Query: 499 PGFKRSELAFCTILEILAEKELMRLAYAVMEKVVHIDLHGIVDVLIDGYVKPEASVKLLD 320
           PGF+RSE  FC ILEILA+  LMR AY VME+V++ ++H IVDVLI G V  E SVK+LD
Sbjct: 109 PGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILD 168

Query: 319 LLLWIYTKGSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEF 140
           LL+W+Y+K SM E CLS FDKMI++ LSPDV+NCNRILR+L + +L+SKA E+Y+ M EF
Sbjct: 169 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 228

Query: 139 GIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           GI+PTIVTYNTLL ++CK G+ Q+ + LLSEMQ RGCAPN+VTYNV
Sbjct: 229 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 274



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/85 (36%), Positives = 45/85 (52%)
 Frame = -1

Query: 259 KMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEFGIRPTIVTYNTLLGTFCKEG 80
           KM+ +G+ PD      I+     +  L K REI+  M   G+ P++VTY  L+     +G
Sbjct: 539 KMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKG 598

Query: 79  EGQEAVHLLSEMQERGCAPNNVTYN 5
             + A    SEMQE+G  PN +TYN
Sbjct: 599 RLERAFIYFSEMQEKGILPNVITYN 623



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/98 (35%), Positives = 51/98 (52%)
 Frame = -1

Query: 295 GSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEFGIRPTIVT 116
           G M++  +     M+ N L PDV + N ++        L KA  ++  +    + PTIVT
Sbjct: 353 GRMSD-AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411

Query: 115 YNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           YNTLL   C++GE + A  L  EM   G AP+ VTY +
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
 Frame = -1

Query: 463 ILEILAEKELMRLAYAVMEKVVHIDLHGIV---DVLIDGYVKPEASVKLLDLLLWIYTKG 293
           IL IL +K+LM  A  V   +    +   +   + L+D Y K     + LDLL  +  +G
Sbjct: 205 ILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG 264

Query: 292 SMT------------------ELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAR 167
                                E       +M++ GL       N ++    N  +L++A 
Sbjct: 265 CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEAL 324

Query: 166 EIYKAMTEFGIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYN 5
            + + M   G  PT+ TYN+ +   CK G   +A+  LS+M      P+ V+YN
Sbjct: 325 SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYN 378


>emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  229 bits (584), Expect = 2e-58
 Identities = 109/166 (65%), Positives = 136/166 (81%)
 Frame = -1

Query: 499 PGFKRSELAFCTILEILAEKELMRLAYAVMEKVVHIDLHGIVDVLIDGYVKPEASVKLLD 320
           PGF+RSE  FC ILEILA+  LMR AY VME+V++ ++H IVDVLI G V  E SVK+LD
Sbjct: 415 PGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILD 474

Query: 319 LLLWIYTKGSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEF 140
           LL+W+Y+K SM E CLS FDKMI++ LSPDV+NCNRILR+L + +L+SKA E+Y+ M EF
Sbjct: 475 LLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEF 534

Query: 139 GIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           GI+PTIVTYNTLL ++CK G+ Q+ + LLSEMQ RGCAPN+VTYNV
Sbjct: 535 GIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNV 580



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/98 (35%), Positives = 51/98 (52%)
 Frame = -1

Query: 295 GSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEFGIRPTIVT 116
           G M++  +     M+ N L PDV + N ++        L KA  ++  +    + PTIVT
Sbjct: 659 GRMSD-AMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 717

Query: 115 YNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           YNTLL   C++GE + A  L  EM   G AP+ VTY +
Sbjct: 718 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 755



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
 Frame = -1

Query: 463  ILEILAEKELMRLAYAVMEKVVHIDLHGIV---DVLIDGYVKPEASVKLLDLLLWIYTKG 293
            IL IL +K+LM  A  V   +    +   +   + L+D Y K     + LDLL  +  +G
Sbjct: 511  ILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG 570

Query: 292  SMT------------------ELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAR 167
                                 E       +M++ GL       N ++    N  LL++A 
Sbjct: 571  CAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEAL 630

Query: 166  EIYKAMTEFGIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYN 5
             + + M   G  PT+ TYN+ +   CK G   +A+  LS+M      P+ V+YN
Sbjct: 631  SLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYN 684


>ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/166 (56%), Positives = 113/166 (68%)
 Frame = -1

Query: 499 PGFKRSELAFCTILEILAEKELMRLAYAVMEKVVHIDLHGIVDVLIDGYVKPEASVKLLD 320
           P FK SE  FC IL+IL   +LM  AY VME+VV  ++HG+VDVLI G+V          
Sbjct: 113 PDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVX--------- 163

Query: 319 LLLWIYTKGSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEF 140
                         CL  FDKMIRNGL PDV+NCNRILRVL + NLLSKA+ +Y  M +F
Sbjct: 164 --------------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 139 GIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           GI+PT+VTYNT+L ++CKEG   +A+ LLSEMQERGC PN+VTYNV
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255


>ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/166 (56%), Positives = 113/166 (68%)
 Frame = -1

Query: 499 PGFKRSELAFCTILEILAEKELMRLAYAVMEKVVHIDLHGIVDVLIDGYVKPEASVKLLD 320
           P FK SE  FC IL+IL   +LM  AY VME+VV  ++HG+VDVLI G+V          
Sbjct: 113 PDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVX--------- 163

Query: 319 LLLWIYTKGSMTELCLSTFDKMIRNGLSPDVRNCNRILRVLHNSNLLSKAREIYKAMTEF 140
                         CL  FDKMIRNGL PDV+NCNRILRVL + NLLSKA+ +Y  M +F
Sbjct: 164 --------------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQF 209

Query: 139 GIRPTIVTYNTLLGTFCKEGEGQEAVHLLSEMQERGCAPNNVTYNV 2
           GI+PT+VTYNT+L ++CKEG   +A+ LLSEMQERGC PN+VTYNV
Sbjct: 210 GIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNV 255