BLASTX nr result

ID: Cimicifuga21_contig00012117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012117
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281096.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vit...   353   4e-95
ref|XP_002274805.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vit...   352   7e-95
ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransfera...   343   3e-92
ref|XP_003605066.1| tRNA 2'-phosphotransferase [Medicago truncat...   334   2e-89
gb|AFK41153.1| unknown [Lotus japonicus]                              333   3e-89

>ref|XP_002281096.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vitis vinifera]
           gi|296089204|emb|CBI38907.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  353 bits (905), Expect = 4e-95
 Identities = 188/283 (66%), Positives = 210/283 (74%)
 Frame = +2

Query: 80  MWAFASNNGFRILRSCVSLSIPIXXXXXXXXXXXXKFGVLASMDKLVNDFSSIAIXXXXX 259
           MWA  + NG R LR C  + +P             +FG L SM+      SS +      
Sbjct: 1   MWASVTGNGIRFLRYCY-VCLPPVTPTPSSLSLLTRFGALVSMENNSAKSSSFSAFAHSS 59

Query: 260 XXXXXXXXXXXXXXXLETRDDWQSSGGGRGGNSKDKIDALGRLLTRILRHKASELSLNMR 439
                           + R+  +  GGG GG+ KDKIDALGRLLTRILRH ASEL+LNMR
Sbjct: 60  RSGGRGRGGTMR----DDRERSRGRGGGGGGSGKDKIDALGRLLTRILRHMASELNLNMR 115

Query: 440 SDGYVRVSDLLKLNLKTFANIPLRSHSVDDIREAVRKDNKQRFGLLEENGELLIRANQGH 619
           SDGY+RV DLLKLN+KTFANIPLRSH++DDIREAVRKDNKQRF LLEENGELLIRANQGH
Sbjct: 116 SDGYIRVEDLLKLNMKTFANIPLRSHTIDDIREAVRKDNKQRFSLLEENGELLIRANQGH 175

Query: 620 TIATIESESLLKAILSAEEAPVCVHGTYKRNLESILQSGLKRMKRLHVHFSSGLPTDGEI 799
           T+  +ESESLLK ILSAEE  VCVHG+YKRNLESIL+SGLKRMKRLHVHFS GLP DGE+
Sbjct: 176 TVTIVESESLLKPILSAEEVTVCVHGSYKRNLESILESGLKRMKRLHVHFSCGLPMDGEV 235

Query: 800 ISGMRRDVNVLIFLDVGKALEDGMKLYISENKVILTEGIDGCV 928
           ISGMRRDVN+LIFLDV KALEDGMKLYIS+NKVILTEG DG V
Sbjct: 236 ISGMRRDVNLLIFLDVRKALEDGMKLYISDNKVILTEGFDGVV 278


>ref|XP_002274805.1| PREDICTED: tRNA 2'-phosphotransferase 1 [Vitis vinifera]
           gi|296089203|emb|CBI38906.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  352 bits (903), Expect = 7e-95
 Identities = 193/289 (66%), Positives = 211/289 (73%), Gaps = 6/289 (2%)
 Frame = +2

Query: 80  MWAFASNNGFRILRSCVSLSIPIXXXXXXXXXXXX--KFGVLASMDKLVNDFSSIAIXXX 253
           MWA  + NG RILR C     P+              +FGVL SM+      SS +    
Sbjct: 1   MWASVTGNGIRILRYCYVCLPPVTPTPSSLSGLSLLTRFGVLVSMENNSAKSSSFSAFAH 60

Query: 254 XXXXXXXXXXXXXXXXXLETRDDWQSS----GGGRGGNSKDKIDALGRLLTRILRHKASE 421
                               RDD + S    GGG G + KDKIDALGRLLTRILRH ASE
Sbjct: 61  SSRSGGRGRGGTM-------RDDRERSRGRGGGGGGSSGKDKIDALGRLLTRILRHMASE 113

Query: 422 LSLNMRSDGYVRVSDLLKLNLKTFANIPLRSHSVDDIREAVRKDNKQRFGLLEENGELLI 601
           L+LNMRSDGYVRV DLLKLN+KTFANIPLRSH++DDIREAVRKDNKQRFGLLEENGELLI
Sbjct: 114 LNLNMRSDGYVRVQDLLKLNMKTFANIPLRSHTIDDIREAVRKDNKQRFGLLEENGELLI 173

Query: 602 RANQGHTIATIESESLLKAILSAEEAPVCVHGTYKRNLESILQSGLKRMKRLHVHFSSGL 781
           RANQGHT+  +ESESLLK ILSAEE  VCVHG+YKRNLESIL+SGLK MKRLHVHFS GL
Sbjct: 174 RANQGHTVTIVESESLLKPILSAEEVTVCVHGSYKRNLESILESGLKHMKRLHVHFSCGL 233

Query: 782 PTDGEIISGMRRDVNVLIFLDVGKALEDGMKLYISENKVILTEGIDGCV 928
           P DGE+ISGMRRDVN+LIFLDV KALEDGMKLYIS+NKVILTEG DG V
Sbjct: 234 PMDGEVISGMRRDVNLLIFLDVRKALEDGMKLYISDNKVILTEGFDGVV 282


>ref|XP_004133917.1| PREDICTED: putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus] gi|449529309|ref|XP_004171642.1| PREDICTED:
           putative tRNA 2'-phosphotransferase-like [Cucumis
           sativus]
          Length = 254

 Score =  343 bits (880), Expect = 3e-92
 Identities = 170/205 (82%), Positives = 186/205 (90%)
 Frame = +2

Query: 314 RDDWQSSGGGRGGNSKDKIDALGRLLTRILRHKASELSLNMRSDGYVRVSDLLKLNLKTF 493
           R+  +  GGG GG+ KDKIDALGRLLTR+LRH ASEL+LNMRSDGYV+V DLLKLNLKTF
Sbjct: 31  RERTRGRGGGGGGSGKDKIDALGRLLTRVLRHMASELNLNMRSDGYVKVEDLLKLNLKTF 90

Query: 494 ANIPLRSHSVDDIREAVRKDNKQRFGLLEENGELLIRANQGHTIATIESESLLKAILSAE 673
           ANIPLRSH++DDIREAVRKDNKQRF  L+ENGELLIRANQGHT+  +E+ESLLK ILSAE
Sbjct: 91  ANIPLRSHTIDDIREAVRKDNKQRFSFLDENGELLIRANQGHTVTAVETESLLKPILSAE 150

Query: 674 EAPVCVHGTYKRNLESILQSGLKRMKRLHVHFSSGLPTDGEIISGMRRDVNVLIFLDVGK 853
           E PVCVHGTYK+NLESIL SGLKRMKRLHVHFS GLPTDGE+ISGMRRDVNVLIFLDV K
Sbjct: 151 EVPVCVHGTYKKNLESILDSGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVQK 210

Query: 854 ALEDGMKLYISENKVILTEGIDGCV 928
           ALEDGMKLYIS+N+VILTEG DG V
Sbjct: 211 ALEDGMKLYISDNRVILTEGFDGVV 235


>ref|XP_003605066.1| tRNA 2'-phosphotransferase [Medicago truncatula]
           gi|355506121|gb|AES87263.1| tRNA 2'-phosphotransferase
           [Medicago truncatula]
          Length = 351

 Score =  334 bits (857), Expect = 2e-89
 Identities = 172/212 (81%), Positives = 189/212 (89%), Gaps = 5/212 (2%)
 Frame = +2

Query: 308 ETRDDWQSS---GGGRG--GNSKDKIDALGRLLTRILRHKASELSLNMRSDGYVRVSDLL 472
           +TR+D + +   GGG G  G+ KDKIDALGRLLTRILRH ASEL LNMRSDG+V V+DLL
Sbjct: 59  DTRNDRERTRGRGGGSGPSGSGKDKIDALGRLLTRILRHMASELKLNMRSDGFVNVNDLL 118

Query: 473 KLNLKTFANIPLRSHSVDDIREAVRKDNKQRFGLLEENGELLIRANQGHTIATIESESLL 652
           KLNLKTFANIPLRSH++DDIREAVRKDNKQRF L+EENGELLIRANQGHT   +E+ESLL
Sbjct: 119 KLNLKTFANIPLRSHTIDDIREAVRKDNKQRFSLVEENGELLIRANQGHTTTAVETESLL 178

Query: 653 KAILSAEEAPVCVHGTYKRNLESILQSGLKRMKRLHVHFSSGLPTDGEIISGMRRDVNVL 832
           K ILSAEE PVCVHGTYKRNL+SIL SGLKRMKRLHVHFS GLPTDGE+ISGMRRDVNVL
Sbjct: 179 KPILSAEEFPVCVHGTYKRNLDSILASGLKRMKRLHVHFSRGLPTDGEVISGMRRDVNVL 238

Query: 833 IFLDVGKALEDGMKLYISENKVILTEGIDGCV 928
           I+LDV KALE+GMKLYIS+NKVILTEG DG V
Sbjct: 239 IYLDVRKALEEGMKLYISDNKVILTEGFDGVV 270


>gb|AFK41153.1| unknown [Lotus japonicus]
          Length = 293

 Score =  333 bits (855), Expect = 3e-89
 Identities = 167/197 (84%), Positives = 181/197 (91%)
 Frame = +2

Query: 338 GGRGGNSKDKIDALGRLLTRILRHKASELSLNMRSDGYVRVSDLLKLNLKTFANIPLRSH 517
           GG GG+ KDKIDALGRLLTRILRH ASEL+LN+RSDGYV V+DLLKLNLKT ANIPLRSH
Sbjct: 78  GGEGGSGKDKIDALGRLLTRILRHMASELNLNLRSDGYVNVNDLLKLNLKTLANIPLRSH 137

Query: 518 SVDDIREAVRKDNKQRFGLLEENGELLIRANQGHTIATIESESLLKAILSAEEAPVCVHG 697
           ++DDIREAVRKDNKQRF L+EENGELLIRANQGHTI  +E+ESLLK ILSAEE  VCVHG
Sbjct: 138 TIDDIREAVRKDNKQRFSLIEENGELLIRANQGHTITAVETESLLKPILSAEEISVCVHG 197

Query: 698 TYKRNLESILQSGLKRMKRLHVHFSSGLPTDGEIISGMRRDVNVLIFLDVGKALEDGMKL 877
           TY+RNLESIL SGLKRMKRLHVHFS GLPTDGE+ISGMRRDVNVLIFLDV KALE+G+KL
Sbjct: 198 TYRRNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVRKALEEGLKL 257

Query: 878 YISENKVILTEGIDGCV 928
           YIS+NKVILTEG DG V
Sbjct: 258 YISDNKVILTEGFDGVV 274


Top