BLASTX nr result
ID: Cimicifuga21_contig00012113
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012113
(1391 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-li... 207 4e-51
emb|CBI26044.3| unnamed protein product [Vitis vinifera] 201 5e-49
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li... 195 3e-47
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2... 192 2e-46
ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li... 192 2e-46
>ref|XP_002275652.1| PREDICTED: condensin-2 complex subunit D3-like [Vitis vinifera]
Length = 1345
Score = 207 bits (528), Expect = 4e-51
Identities = 120/201 (59%), Positives = 140/201 (69%), Gaps = 2/201 (0%)
Frame = -1
Query: 1298 RRKLVAQVAKKSLIQNAIPIFIELKRFLESKNSPLVGSLMECLRVLLKDYKNEIDDILVA 1119
R + + Q KKSL+QN IPIFIELKR LESKNSPL GSLMECLR+LLKDYKNEIDD+LVA
Sbjct: 1161 RGRAITQAVKKSLVQNTIPIFIELKRLLESKNSPLTGSLMECLRILLKDYKNEIDDMLVA 1220
Query: 1118 DKQLQKELIYDMQKYEAVKAKSTVVEAVATAQRSNICSPSGRGPGTISRLASDLNVNGRL 939
DKQLQKELIYDM+KY+A KAKST AVAT Q P R P +S+ L V R+
Sbjct: 1221 DKQLQKELIYDMEKYDAAKAKSTAAAAVATMQ------PCYRSP-HVSKFTERLPVQSRV 1273
Query: 938 AEQLGSAQKXXXXXXXXXXXXXVKSVLREVNRGMSTPQLNSISRPKLKSSMG--EASRGN 765
A + A V+SVL+EVNRG TP +SI RPKLKSSMG +SRG+
Sbjct: 1274 ASAMSDA----------VAAATVRSVLKEVNRGSPTPPFSSIGRPKLKSSMGGTTSSRGD 1323
Query: 764 CPLEVLESLRRRQIFDTVEEN 702
PL+V+ESLRRRQ F++ EEN
Sbjct: 1324 RPLDVIESLRRRQSFNSDEEN 1344
>emb|CBI26044.3| unnamed protein product [Vitis vinifera]
Length = 1294
Score = 201 bits (510), Expect = 5e-49
Identities = 118/201 (58%), Positives = 142/201 (70%), Gaps = 2/201 (0%)
Frame = -1
Query: 1298 RRKLVAQVAKKSLIQNAIPIFIELKRFLESKNSPLVGSLMECLRVLLKDYKNEIDDILVA 1119
R + + Q KKSL+QN IPIFIELKR LESKNSPL GSLMECLR+LLKDYKNEIDD+LVA
Sbjct: 1120 RGRAITQAVKKSLVQNTIPIFIELKRLLESKNSPLTGSLMECLRILLKDYKNEIDDMLVA 1179
Query: 1118 DKQLQKELIYDMQKYEAVKAKSTVVEAVATAQRSNICSPSGRGPGTISRLASDLNVNGRL 939
DKQLQKELIYDM+KY+A KAKST AVAT Q P R P +S++AS +
Sbjct: 1180 DKQLQKELIYDMEKYDAAKAKSTAAAAVATMQ------PCYRSP-HVSKVAS------AM 1226
Query: 938 AEQLGSAQKXXXXXXXXXXXXXVKSVLREVNRGMSTPQLNSISRPKLKSSMG--EASRGN 765
++ + +A V+SVL+EVNRG TP +SI RPKLKSSMG +SRG+
Sbjct: 1227 SDAVAAA--------------TVRSVLKEVNRGSPTPPFSSIGRPKLKSSMGGTTSSRGD 1272
Query: 764 CPLEVLESLRRRQIFDTVEEN 702
PL+V+ESLRRRQ F++ EEN
Sbjct: 1273 RPLDVIESLRRRQSFNSDEEN 1293
>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
Length = 1324
Score = 195 bits (495), Expect = 3e-47
Identities = 106/204 (51%), Positives = 138/204 (67%), Gaps = 5/204 (2%)
Frame = -1
Query: 1298 RRKLVAQVAKKSLIQNAIPIFIELKRFLESKNSPLVGSLMECLRVLLKDYKNEIDDILVA 1119
RRK + Q KK LIQN +PIFIELKR LE+KNSPL+GSLMECLR++LKDYKNEIDDILVA
Sbjct: 1129 RRKAITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVA 1188
Query: 1118 DKQLQKELIYDMQKYEAVKAKSTVVEAVATAQRSNICSPSGRGPGTISRLASDLNVN--- 948
DKQLQKELIYD+QKYEA KAK+TV EAV T +S G ++ ++ +L
Sbjct: 1189 DKQLQKELIYDIQKYEAAKAKATVAEAVGTKPKS--------GSNQLADVSKNLTKTQEQ 1240
Query: 947 --GRLAEQLGSAQKXXXXXXXXXXXXXVKSVLREVNRGMSTPQLNSISRPKLKSSMGEAS 774
G+ + +L S + +SVLRE+N+G TP L+S+S PK+KS G +
Sbjct: 1241 TVGQSSNELPSDSRVASAIADTAAAATARSVLREINKGTGTPPLSSLSVPKVKSCTGMCN 1300
Query: 773 RGNCPLEVLESLRRRQIFDTVEEN 702
+ ++V++SLR+RQ FD+ EEN
Sbjct: 1301 SKDKCMDVIQSLRKRQSFDSDEEN 1324
>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
predicted protein [Populus trichocarpa]
Length = 1272
Score = 192 bits (488), Expect = 2e-46
Identities = 113/201 (56%), Positives = 135/201 (67%), Gaps = 2/201 (0%)
Frame = -1
Query: 1298 RRKLVAQVAKKSLIQNAIPIFIELKRFLESKNSPLVGSLMECLRVLLKDYKNEIDDILVA 1119
+R + Q KK LIQN IPIFIELKR LESKNSPL GSLMECLR++LKDYKNEID+ILVA
Sbjct: 1078 KRGAITQAVKKGLIQNTIPIFIELKRLLESKNSPLTGSLMECLRIILKDYKNEIDEILVA 1137
Query: 1118 DKQLQKELIYDMQKYEAVKAKSTVVEAVATAQ-RSNICSPSGRGPGTISRLASDLNVNGR 942
DKQLQKELIYDMQKYE KAKS VA+ Q S+ SP ++ +LN N +
Sbjct: 1138 DKQLQKELIYDMQKYETSKAKSAAAVVVASMQNHSSFLSPGASKTAGGTKAQDNLNENPQ 1197
Query: 941 LAEQLGSAQKXXXXXXXXXXXXXVKSVLREVNRGMSTPQLNSISRPKLKSSM-GEASRGN 765
++ SA V+SVLREVNRG++TP L+SISRPKLK + G +R +
Sbjct: 1198 SDSRVASAM------ANAVAEARVRSVLREVNRGIATPPLSSISRPKLKPNQDGTGARTD 1251
Query: 764 CPLEVLESLRRRQIFDTVEEN 702
P VLESLRRRQ F + +EN
Sbjct: 1252 RPPHVLESLRRRQSFYSDDEN 1272
>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
Length = 1334
Score = 192 bits (487), Expect = 2e-46
Identities = 104/200 (52%), Positives = 134/200 (67%), Gaps = 1/200 (0%)
Frame = -1
Query: 1298 RRKLVAQVAKKSLIQNAIPIFIELKRFLESKNSPLVGSLMECLRVLLKDYKNEIDDILVA 1119
R K + Q KK LIQN +PIFIELKR LE+KNSPL+GSLMECLR++LKDYKNEIDDILVA
Sbjct: 1139 RGKTITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVA 1198
Query: 1118 DKQLQKELIYDMQKYEAVKAKSTVVEAVATAQRSNICSPSGRGPGTISRLASDLNVN-GR 942
DKQLQKELIYD++KYEA KAK+TV EAV T + S S + P L G+
Sbjct: 1199 DKQLQKELIYDIKKYEAAKAKATVAEAVGTKPK----SVSNQSPDASKNLTKTQGQTVGQ 1254
Query: 941 LAEQLGSAQKXXXXXXXXXXXXXVKSVLREVNRGMSTPQLNSISRPKLKSSMGEASRGNC 762
+ +L S + +SVLRE+N+G +TP L+S+S PK+KS G +
Sbjct: 1255 SSNELPSDSRVASAMANAAAAATARSVLREINKGTATPSLSSLSVPKVKSCTGMCHSKDK 1314
Query: 761 PLEVLESLRRRQIFDTVEEN 702
++V++S+R+RQ FD+ EEN
Sbjct: 1315 RMDVIQSIRKRQSFDSDEEN 1334