BLASTX nr result

ID: Cimicifuga21_contig00012108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012108
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...    99   1e-18
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch...    95   2e-17
ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|2...    94   3e-17
gb|ABK96073.1| unknown [Populus trichocarpa]                           94   3e-17
ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloropla...    92   2e-16

>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
            [Vitis vinifera] gi|297734621|emb|CBI16672.3| unnamed
            protein product [Vitis vinifera]
          Length = 1071

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 55/101 (54%), Positives = 66/101 (65%)
 Frame = +3

Query: 192  AFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 371
            AFL +++KI+PG+EV+DF EASS LLQPL+                              
Sbjct: 1000 AFLSVRNKIYPGIEVDDFFEASSQLLQPLEDFF--------------------------- 1032

Query: 372  XXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494
              N+VFVMVE+ER+RKNRLALLK+IADLPKGIADLSVLPGF
Sbjct: 1033 --NNVFVMVEEERIRKNRLALLKKIADLPKGIADLSVLPGF 1071


>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
            Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 1069

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 55/102 (53%), Positives = 63/102 (61%)
 Frame = +3

Query: 189  SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
            S FL  KSKI P +EV++FVE SS LLQPL+                             
Sbjct: 997  SIFLSTKSKIFPDIEVDEFVEVSSELLQPLEDFF-------------------------- 1030

Query: 369  XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494
               N+VFVMVEDER+RKNRLALLK+IADLP+GIADLSVLPGF
Sbjct: 1031 ---NNVFVMVEDERIRKNRLALLKKIADLPRGIADLSVLPGF 1069


>ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 53/102 (51%), Positives = 63/102 (61%)
 Frame = +3

Query: 189 SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           S F   KSKI+PG+E+++FVE SS LLQPL+                             
Sbjct: 440 STFTSTKSKIYPGIEIDEFVEISSELLQPLEDFF-------------------------- 473

Query: 369 XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494
              N+VFVMVEDER+RKNRLALL +IADLP+GIADLSVLPGF
Sbjct: 474 ---NNVFVMVEDERIRKNRLALLNKIADLPRGIADLSVLPGF 512


>gb|ABK96073.1| unknown [Populus trichocarpa]
          Length = 512

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 53/102 (51%), Positives = 63/102 (61%)
 Frame = +3

Query: 189 SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           S F   KSKI+PG+E+++FVE SS LLQPL+                             
Sbjct: 440 STFTSTKSKIYPGIEIDEFVEISSELLQPLEDFF-------------------------- 473

Query: 369 XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494
              N+VFVMVEDER+RKNRLALL +IADLP+GIADLSVLPGF
Sbjct: 474 ---NNVFVMVEDERIRKNRLALLNKIADLPRGIADLSVLPGF 512


>ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2,
           chloroplastic/mitochondrial-like, partial [Cucumis
           sativus]
          Length = 534

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 50/102 (49%), Positives = 62/102 (60%)
 Frame = +3

Query: 189 SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368
           + FL IK+K+HPG+EV++F E SS L+QPL+                             
Sbjct: 462 NTFLSIKNKVHPGIEVDEFFEISSKLIQPLEDFF-------------------------- 495

Query: 369 XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494
               HVFVMVEDE++RKNRLALLK+IADLP GIADLS+L GF
Sbjct: 496 ---EHVFVMVEDEKIRKNRLALLKRIADLPSGIADLSLLSGF 534