BLASTX nr result
ID: Cimicifuga21_contig00012108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00012108 (804 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop... 99 1e-18 ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch... 95 2e-17 ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|2... 94 3e-17 gb|ABK96073.1| unknown [Populus trichocarpa] 94 3e-17 ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloropla... 92 2e-16 >ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like [Vitis vinifera] gi|297734621|emb|CBI16672.3| unnamed protein product [Vitis vinifera] Length = 1071 Score = 99.0 bits (245), Expect = 1e-18 Identities = 55/101 (54%), Positives = 66/101 (65%) Frame = +3 Query: 192 AFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 371 AFL +++KI+PG+EV+DF EASS LLQPL+ Sbjct: 1000 AFLSVRNKIYPGIEVDDFFEASSQLLQPLEDFF--------------------------- 1032 Query: 372 XXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494 N+VFVMVE+ER+RKNRLALLK+IADLPKGIADLSVLPGF Sbjct: 1033 --NNVFVMVEEERIRKNRLALLKKIADLPKGIADLSVLPGF 1071 >ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] gi|223548759|gb|EEF50248.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative [Ricinus communis] Length = 1069 Score = 94.7 bits (234), Expect = 2e-17 Identities = 55/102 (53%), Positives = 63/102 (61%) Frame = +3 Query: 189 SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368 S FL KSKI P +EV++FVE SS LLQPL+ Sbjct: 997 SIFLSTKSKIFPDIEVDEFVEVSSELLQPLEDFF-------------------------- 1030 Query: 369 XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494 N+VFVMVEDER+RKNRLALLK+IADLP+GIADLSVLPGF Sbjct: 1031 ---NNVFVMVEDERIRKNRLALLKKIADLPRGIADLSVLPGF 1069 >ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1| predicted protein [Populus trichocarpa] Length = 512 Score = 94.4 bits (233), Expect = 3e-17 Identities = 53/102 (51%), Positives = 63/102 (61%) Frame = +3 Query: 189 SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368 S F KSKI+PG+E+++FVE SS LLQPL+ Sbjct: 440 STFTSTKSKIYPGIEIDEFVEISSELLQPLEDFF-------------------------- 473 Query: 369 XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494 N+VFVMVEDER+RKNRLALL +IADLP+GIADLSVLPGF Sbjct: 474 ---NNVFVMVEDERIRKNRLALLNKIADLPRGIADLSVLPGF 512 >gb|ABK96073.1| unknown [Populus trichocarpa] Length = 512 Score = 94.4 bits (233), Expect = 3e-17 Identities = 53/102 (51%), Positives = 63/102 (61%) Frame = +3 Query: 189 SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368 S F KSKI+PG+E+++FVE SS LLQPL+ Sbjct: 440 STFTSTKSKIYPGIEIDEFVEISSELLQPLEDFF-------------------------- 473 Query: 369 XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494 N+VFVMVEDER+RKNRLALL +IADLP+GIADLSVLPGF Sbjct: 474 ---NNVFVMVEDERIRKNRLALLNKIADLPRGIADLSVLPGF 512 >ref|XP_004166648.1| PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial-like, partial [Cucumis sativus] Length = 534 Score = 91.7 bits (226), Expect = 2e-16 Identities = 50/102 (49%), Positives = 62/102 (60%) Frame = +3 Query: 189 SAFLEIKSKIHPGVEVEDFVEASSGLLQPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 368 + FL IK+K+HPG+EV++F E SS L+QPL+ Sbjct: 462 NTFLSIKNKVHPGIEVDEFFEISSKLIQPLEDFF-------------------------- 495 Query: 369 XXXNHVFVMVEDERVRKNRLALLKQIADLPKGIADLSVLPGF 494 HVFVMVEDE++RKNRLALLK+IADLP GIADLS+L GF Sbjct: 496 ---EHVFVMVEDEKIRKNRLALLKRIADLPSGIADLSLLSGF 534