BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012103
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   369   e-100
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   345   1e-92
ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2...   318   2e-84
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...   281   3e-73
ref|XP_002889992.1| RNA recognition motif-containing protein [Ar...   233   1e-58

>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  369 bits (948), Expect = e-100
 Identities = 205/363 (56%), Positives = 239/363 (65%), Gaps = 7/363 (1%)
 Frame = -3

Query: 1113 MAEEQLDYGDDEYG--QKMQYQGGGAISXXXXXXXXXXXXXXXXXXXXXXVGEGFLQLHR 940
            MAEEQLDY D+EYG  QKM +QGGGAIS                      VGEGFLQ+HR
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 939  PET-VPLGGVGNGEAHVQKIDGTGSRVHEHGAAPQVTIPGVAVEGKDSSISARFPEHNNK 763
             E   P G +  G     K D    ++ E G +  + IPGV++EGK S+       H  K
Sbjct: 61   SEAPAPSGVMAGGPFQAHKTDVPPQKL-EAGTSQGLIIPGVSIEGKYSNPHF----HEKK 115

Query: 762  GGFISGKVLEEGASGYQDG--VLQRGRLPEIAHDAQVGNAGLQGVAPAPPNIRVDPSQMS 589
             G ++ K  E G++ + DG  V Q+GR+ E+ HD QV N G QG  P P     +PS + 
Sbjct: 116  EGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVH 175

Query: 588  GNFVTXXXXXXXXXXXXXXXXPQMPVNRMA--INVSRPVVNDNLTRPTLENGTTMIFVGE 415
            G                    PQM  N+M   +NV+RP+VN+N  RP ++NG TM+FVGE
Sbjct: 176  GKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGE 235

Query: 414  LHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDPAAAAACKEGMNGYLF 235
            LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEF+D +AAAACKEGMNGY+F
Sbjct: 236  LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIF 295

Query: 234  NGRACVVAFASPQTLKQMGASYINKTQTQAQSQPQGRRPMNDGVGRGGGMNFPGGDTGRN 55
            NGRACVVAFASPQTLKQMGASY+NK  TQAQSQ QGRRPMNDGVGRGGGMN  GGD GRN
Sbjct: 296  NGRACVVAFASPQTLKQMGASYMNK--TQAQSQSQGRRPMNDGVGRGGGMNMQGGDAGRN 353

Query: 54   YGK 46
            YG+
Sbjct: 354  YGR 356


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  345 bits (886), Expect = 1e-92
 Identities = 198/363 (54%), Positives = 231/363 (63%), Gaps = 7/363 (1%)
 Frame = -3

Query: 1113 MAEEQLDYGDDEYG--QKMQYQGGGAISXXXXXXXXXXXXXXXXXXXXXXVGEGFLQLHR 940
            MA+EQ+DY D+EYG  QK+QYQG GAI                        GE FLQ+HR
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEEMGEDDEYDDLYNDVNI-GENFLQMHR 59

Query: 939  PETVPLG-GVGNGEAHVQKIDGTGSRVHEHGAAPQVTIPGVAVEGKDSSISARFPEHNNK 763
             E  P    VGNG    Q  +    RV E G +  + IPGVAVE K S+    FPE N K
Sbjct: 60   SEAPPAPPSVGNGG--FQPRNSNDLRV-ESGGSQGLNIPGVAVESKYST-GTHFPEQNVK 115

Query: 762  GGFISGKVLEEGASGYQDG--VLQRGRLPEIAHDAQVGNAGLQGVAPAPPNIRVDPSQMS 589
            G        E G+ GY DG  + Q+ R+ E+ +D+Q  N G QG    P NI VDPS M+
Sbjct: 116  GP-------EIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMN 168

Query: 588  GNFVTXXXXXXXXXXXXXXXXPQMPVNRMAINV--SRPVVNDNLTRPTLENGTTMIFVGE 415
                                  Q+P ++M +N+  +R   N+N  RP LENG+TM++VGE
Sbjct: 169  NKISNDPTPVPNAGVPRVIP--QLPASQMNMNMDTNRSATNENQIRPPLENGSTMLYVGE 226

Query: 414  LHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDPAAAAACKEGMNGYLF 235
            LHWWTTDAELE VLSQYG VKEIKFFDERASGKSKGYCQVEF+D AAAAACKEGMNG+LF
Sbjct: 227  LHWWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLF 286

Query: 234  NGRACVVAFASPQTLKQMGASYINKTQTQAQSQPQGRRPMNDGVGRGGGMNFPGGDTGRN 55
            NGRACVVAFAS QTLKQMGASY+NK Q Q QSQ QGRRPMNDG GRGG MN+ GGD GRN
Sbjct: 287  NGRACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMNDGAGRGGNMNYQGGDAGRN 346

Query: 54   YGK 46
            +G+
Sbjct: 347  FGR 349


>ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1|
            predicted protein [Populus trichocarpa]
          Length = 619

 Score =  318 bits (815), Expect = 2e-84
 Identities = 186/361 (51%), Positives = 220/361 (60%), Gaps = 10/361 (2%)
 Frame = -3

Query: 1098 LDYGDDEYGQKMQYQGGGAISXXXXXXXXXXXXXXXXXXXXXXVGEGFLQLHRPET-VPL 922
            +DY ++E   KMQYQG GAI                        GE FLQ+H  E   P 
Sbjct: 1    MDYEEEE---KMQYQGSGAIPALAEEEMGEDDEYDDLYNDVNV-GENFLQMHGSEAPAPP 56

Query: 921  GGVGNG-----EAHVQKIDGTGSRVHEHGAAPQVTIPGVAVEGKDSSISARFPEHNNKGG 757
              VGNG      AH  +I+  GS+      A  +T  G AVEG  S+  A FPE      
Sbjct: 57   ATVGNGGFQTRNAHESRIETGGSQ------ALAITGGGPAVEGIYSNAKAHFPEQKQVAV 110

Query: 756  FISGKVLEEGASGYQDG--VLQRGRLPEIAHDAQVGNAGLQGVAPAPPNIRVDPSQMSGN 583
             +  + +     G  DG  V Q+GR+ E++HD QV N G Q   P PP I VDPS MS  
Sbjct: 111  AVEAQDV-----GPVDGSSVAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRK 165

Query: 582  FVTXXXXXXXXXXXXXXXXPQMPVNRM--AINVSRPVVNDNLTRPTLENGTTMIFVGELH 409
                               PQM VN+M  + +V+RPVVN+N  RP +ENG+T ++VGELH
Sbjct: 166  NAIEPEPLPITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELH 225

Query: 408  WWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDPAAAAACKEGMNGYLFNG 229
            WWTTDAELE   SQ+GRVKEIKFFDERASGKSKGYCQV+F++ AAAAACKEGMNG++FNG
Sbjct: 226  WWTTDAELESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNG 285

Query: 228  RACVVAFASPQTLKQMGASYINKTQTQAQSQPQGRRPMNDGVGRGGGMNFPGGDTGRNYG 49
            R CVVAFASPQTLKQMGASY+NKTQ Q Q+Q QGR  MNDG GRGG  NF  GD GRNYG
Sbjct: 286  RPCVVAFASPQTLKQMGASYMNKTQGQPQTQSQGRGSMNDGAGRGGNANFQSGDGGRNYG 345

Query: 48   K 46
            +
Sbjct: 346  R 346


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  281 bits (719), Expect = 3e-73
 Identities = 173/355 (48%), Positives = 203/355 (57%), Gaps = 8/355 (2%)
 Frame = -3

Query: 1086 DDEYGQKMQYQGGGAISXXXXXXXXXXXXXXXXXXXXXXVGEGFLQLHRPET-VPLGGVG 910
            D E  +KMQYQG GAI                        GE FLQ+H  E   P    G
Sbjct: 2    DFEEEEKMQYQGSGAIPALAEEELGEDDEYDDLYNDVNV-GENFLQMHGSEAPAPPATAG 60

Query: 909  NG-----EAHVQKIDGTGSRVHEHGAAPQVTIPGVAVEGKDSSISARFPEHNNKGGFISG 745
            NG      AH  +++  GS+V     A      GVAVEGK S+  A FPE    G  I  
Sbjct: 61   NGGFQTRNAHESRVETGGSQVLATSGA------GVAVEGKYSNAGAHFPEQKQAG--IGV 112

Query: 744  KVLEEGASGYQDGVLQRGRLPEIAHDAQVGNAGLQGVAPAPPNIRVDPSQMSGNFVTXXX 565
            +  + G+ GY DG          +  AQ G+AG +GV                       
Sbjct: 113  EANDVGSIGYGDG----------SSVAQKGSAGPRGV----------------------- 139

Query: 564  XXXXXXXXXXXXXPQMPVNRMAIN--VSRPVVNDNLTRPTLENGTTMIFVGELHWWTTDA 391
                         PQM VN+M +N  V+RPVVN+N  RP +ENG T ++VGELHWWTTDA
Sbjct: 140  -------------PQMQVNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDA 186

Query: 390  ELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDPAAAAACKEGMNGYLFNGRACVVA 211
            ELE V SQYGRVKEIKFFDERASGKSKGYCQV+F++ AAAAACKEGMN ++FNGR CVVA
Sbjct: 187  ELESVASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVA 246

Query: 210  FASPQTLKQMGASYINKTQTQAQSQPQGRRPMNDGVGRGGGMNFPGGDTGRNYGK 46
            FAS QTLKQMGASY++KTQ Q Q Q QGR  MNDG+GRGG  N+  GD GRNYG+
Sbjct: 247  FASAQTLKQMGASYMSKTQGQPQPQSQGRGSMNDGMGRGGNANYQSGDGGRNYGR 301


>ref|XP_002889992.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297335834|gb|EFH66251.1| RNA recognition
            motif-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 573

 Score =  233 bits (593), Expect = 1e-58
 Identities = 153/361 (42%), Positives = 196/361 (54%), Gaps = 8/361 (2%)
 Frame = -3

Query: 1104 EQLDYGDDEYGQKMQYQGGGAISXXXXXXXXXXXXXXXXXXXXXXVGEGFLQLHRPETVP 925
            E+ DYG +   QK+ +QG G I                       VGE F Q H     P
Sbjct: 3    EENDYGGN---QKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFFQAHNQPQPP 59

Query: 924  LGGVGNGEAHVQKIDGTGSRVHEHGAAPQVTI-PGVAVEGKDSSISARFPEHNNKGGF-- 754
                G G A +Q      ++     A P++ I  G  VEGK          + N GG   
Sbjct: 60   AQVGGTGNASLQ------AQTSHVAAEPRMGIVSGGTVEGK----------YRNDGGHNG 103

Query: 753  ISGKVLEEGASGYQDGVLQRGRLPEIAHDAQVGNAGLQGVAPAPPNIRVDPSQMSGNFVT 574
            ISG                +G    +  D Q    G QG      ++ ++    SGN V 
Sbjct: 104  ISGPDTRSDVYPQASSFGAKG----LNIDIQSNKIGQQGST----SVVLNNHGFSGNAVN 155

Query: 573  XXXXXXXXXXXXXXXXPQ-MPVNRMAINVSRPVVNDNLTRP-TLENGTTMIFVGELHWWT 400
                             Q +PV++M++N +  ++N + T+P  ++NG TM+FVGELHWWT
Sbjct: 156  VPELPVHNPYGAPPQGAQQIPVSQMSVNPN-VMMNKSPTQPFVVDNGNTMLFVGELHWWT 214

Query: 399  TDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDPAAAAACKEGMNGYLFNGRAC 220
            TDAE+E VLSQYGRVKEIKFFDER SGKSKGYCQVEF+D AAAA+CKEGMNGY+FNG+AC
Sbjct: 215  TDAEIESVLSQYGRVKEIKFFDERVSGKSKGYCQVEFYDSAAAASCKEGMNGYIFNGKAC 274

Query: 219  VVAFASPQTLKQMGASYINKTQTQAQSQPQGRRPMNDGVGRG---GGMNFPGGDTGRNYG 49
            VVAFASP+TLKQMGA++  +   Q Q+Q Q RRP+N+G+GRG     MN   GD GRNYG
Sbjct: 275  VVAFASPETLKQMGANFTGR--NQGQNQIQNRRPLNEGMGRGNNNNNMNTQNGDGGRNYG 332

Query: 48   K 46
            +
Sbjct: 333  R 333