BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012097
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea bras...   249   3e-64
ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|1...   248   7e-64
ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloro...   248   7e-64
ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|2...   243   3e-62
ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus...   241   1e-61

>gb|ADR30788.1| chloroplast 30S ribosomal protein S13 [Hevea brasiliensis]
          Length = 168

 Score =  249 bits (637), Expect = 3e-64
 Identities = 124/168 (73%), Positives = 139/168 (82%)
 Frame = +1

Query: 112 MAQALAMPIASSLSIIYKXXXXXXXXXXXXXXXXXXHKVGGLSIRCARVGGVEIPNNKRV 291
           MAQ LAMP+A SLS+I                     K+ GLSI+CARVGGVEIPNNKRV
Sbjct: 1   MAQTLAMPVAPSLSLICNGWRNNSLSTFVSLPISNPPKIHGLSIQCARVGGVEIPNNKRV 60

Query: 292 EYSLQYIHGIGRTRARQILNDLNMDNKVTKELSEEELIIIRDEVSKYMIEGDLKRFNALA 471
           EYSLQYIHG+GR+RARQIL+DL+M NK+TK+LSEEELI +RDEVSKYMIEGDL+RFNAL 
Sbjct: 61  EYSLQYIHGVGRSRARQILSDLSMQNKITKDLSEEELITLRDEVSKYMIEGDLRRFNALN 120

Query: 472 IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 615
           IR LKEIQC+RG+RHIQGLPCRGQRTKNNCRTLKGKRV +AGKKKAPR
Sbjct: 121 IRGLKEIQCHRGIRHIQGLPCRGQRTKNNCRTLKGKRVTVAGKKKAPR 168


>ref|XP_002302256.1| predicted protein [Populus trichocarpa] gi|118488232|gb|ABK95935.1|
           unknown [Populus trichocarpa]
           gi|222843982|gb|EEE81529.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  248 bits (634), Expect = 7e-64
 Identities = 125/168 (74%), Positives = 137/168 (81%)
 Frame = +1

Query: 112 MAQALAMPIASSLSIIYKXXXXXXXXXXXXXXXXXXHKVGGLSIRCARVGGVEIPNNKRV 291
           MAQ LAMP+  SLS I                     K G LSIRCARVGGVEIPN+KRV
Sbjct: 1   MAQTLAMPVVPSLSAICNGLKSTSLSNSISLPISNPPKAGSLSIRCARVGGVEIPNSKRV 60

Query: 292 EYSLQYIHGIGRTRARQILNDLNMDNKVTKELSEEELIIIRDEVSKYMIEGDLKRFNALA 471
           EYSLQYIHGIGR+ ARQIL+DL+M+NK+TK+LSEEELII+RDEVSKY IEGDL+RFNAL 
Sbjct: 61  EYSLQYIHGIGRSNARQILSDLSMENKITKDLSEEELIILRDEVSKYTIEGDLRRFNALN 120

Query: 472 IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 615
           IRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTLKGKRV+I GKKKAPR
Sbjct: 121 IRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168


>ref|XP_002285833.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Vitis
           vinifera] gi|302141873|emb|CBI19076.3| unnamed protein
           product [Vitis vinifera]
          Length = 167

 Score =  248 bits (634), Expect = 7e-64
 Identities = 125/166 (75%), Positives = 139/166 (83%)
 Frame = +1

Query: 112 MAQALAMPIASSLSIIYKXXXXXXXXXXXXXXXXXXHKVGGLSIRCARVGGVEIPNNKRV 291
           MAQALA P+A SLS+I                     K GGLSI+CARVGGVEIPN+KRV
Sbjct: 1   MAQALATPLAPSLSLICNTRNPLSPSNNLSFSTPAPPKFGGLSIKCARVGGVEIPNSKRV 60

Query: 292 EYSLQYIHGIGRTRARQILNDLNMDNKVTKELSEEELIIIRDEVSKYMIEGDLKRFNALA 471
           EYSLQYIHGIGR+R++QIL DL M+NK+TK+LSEEELI +RDEVSKYMIEGDL+RFNALA
Sbjct: 61  EYSLQYIHGIGRSRSKQILCDLGMENKITKDLSEEELITLRDEVSKYMIEGDLRRFNALA 120

Query: 472 IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKA 609
           IRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRTLKGKRV+IAGKKKA
Sbjct: 121 IRRLKEIQCYRGIRHIQGLPCRGQRTKNNCRTLKGKRVSIAGKKKA 166


>ref|XP_002306609.1| predicted protein [Populus trichocarpa] gi|222856058|gb|EEE93605.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  243 bits (620), Expect = 3e-62
 Identities = 124/168 (73%), Positives = 136/168 (80%)
 Frame = +1

Query: 112 MAQALAMPIASSLSIIYKXXXXXXXXXXXXXXXXXXHKVGGLSIRCARVGGVEIPNNKRV 291
           MAQ LA+P+  SLS I                     KV  LSIRCARVGGVEIPN+KRV
Sbjct: 1   MAQTLAIPVVPSLSAICNGLKNTSLSSSISPPVSNPPKVCSLSIRCARVGGVEIPNSKRV 60

Query: 292 EYSLQYIHGIGRTRARQILNDLNMDNKVTKELSEEELIIIRDEVSKYMIEGDLKRFNALA 471
           EYSLQYIHGIGR+ ARQIL+DL M+NK+TK+LSE+ELI +RDEVSKYMIEGDL+RFNAL 
Sbjct: 61  EYSLQYIHGIGRSIARQILSDLTMENKITKDLSEDELITLRDEVSKYMIEGDLRRFNALN 120

Query: 472 IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIAGKKKAPR 615
           IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV+I GKKKAPR
Sbjct: 121 IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVSIPGKKKAPR 168


>ref|XP_002513824.1| 30S ribosomal protein S13, putative [Ricinus communis]
           gi|223546910|gb|EEF48407.1| 30S ribosomal protein S13,
           putative [Ricinus communis]
          Length = 290

 Score =  241 bits (614), Expect = 1e-61
 Identities = 115/130 (88%), Positives = 125/130 (96%)
 Frame = +1

Query: 226 VGGLSIRCARVGGVEIPNNKRVEYSLQYIHGIGRTRARQILNDLNMDNKVTKELSEEELI 405
           V GLSIRCARVGGVEIPNNKR+EYSLQYIHG+GR+RARQIL+DL+M+NK+TKELSEEELI
Sbjct: 161 VHGLSIRCARVGGVEIPNNKRIEYSLQYIHGVGRSRARQILSDLSMENKITKELSEEELI 220

Query: 406 IIRDEVSKYMIEGDLKRFNALAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV 585
            +RDEVSKYMIEGDL+RFNAL IRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV
Sbjct: 221 TLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRV 280

Query: 586 AIAGKKKAPR 615
            +AGKKK PR
Sbjct: 281 TVAGKKKTPR 290



 Score =  122 bits (305), Expect = 1e-25
 Identities = 61/114 (53%), Positives = 82/114 (71%)
 Frame = +1

Query: 241 IRCARVGGVEIPNNKRVEYSLQYIHGIGRTRARQILNDLNMDNKVTKELSEEELIIIRDE 420
           ++C RVG  EIP++K++ ++LQ+I GIGR RA QIL DL+++NK TK+L+  EL  +R+E
Sbjct: 33  VQCLRVGNAEIPDDKQLRFALQHIRGIGRQRAHQILIDLSLENKRTKDLTGLELHTLRNE 92

Query: 421 VSKYMIEGDLKRFNALAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKR 582
           VSKY+I  +L R     I+RL +IQCYRG  H   LPCRGQ T+ N RT KG R
Sbjct: 93  VSKYLIGEELTRCVRSDIQRLADIQCYRGYNHACLLPCRGQLTRTNARTRKGMR 146