BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012081
         (1428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522615.1| pentatricopeptide repeat-containing protein,...   488   e-135
ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containi...   486   e-135
ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containi...   484   e-134
ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containi...   479   e-133
ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|2...   479   e-132

>ref|XP_002522615.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223538091|gb|EEF39702.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 426

 Score =  488 bits (1257), Expect = e-135
 Identities = 237/351 (67%), Positives = 285/351 (81%)
 Frame = +1

Query: 235  EDDLKSRIFRLRFSKRSATNALEKWASEGNQVTISELRNIAKDLRKSQRYKHALEISEWM 414
            EDDLKSRIFRLR  KRSATN +  W SEGN VT SELRNI+ +LRK QRYKHALEISEWM
Sbjct: 73   EDDLKSRIFRLRLPKRSATNIIHNWVSEGNTVTASELRNISNELRKLQRYKHALEISEWM 132

Query: 415  IRHQEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLTVKSGETYTALLHSYAGAKLTE 594
            + ++EFEL D DY  RIDLMTKVFGIDAAERYFEGLP+TVK+ ETYTALLHSYAG K   
Sbjct: 133  VTNKEFELMDFDYATRIDLMTKVFGIDAAERYFEGLPITVKTSETYTALLHSYAGVKQLG 192

Query: 595  KAERLFDRVKEANVTLNAMIYNEMMTLYMSVGQLEKVPSVIEELKRRKVSPDLFTYNLWI 774
            KAE L++R+K +N++  A+ YNEMMTLYMSVGQ+EKV  V+EELKR+K++PD+FTYNLWI
Sbjct: 193  KAEELYERIKGSNLSFTALTYNEMMTLYMSVGQVEKVSLVVEELKRQKIAPDIFTYNLWI 252

Query: 775  SSCAANLDIDSVAKVLDEMSCDSNSNEGWMIYRQLTNIYVTAGNLVNSQCNSLVETEKKI 954
            SSCAA L+ID V ++LDEM  DS  N+ W+ Y  + NIYV AG+LVN++ +++VE EK I
Sbjct: 253  SSCAAILNIDQVTRILDEMKHDSGCNDDWLRYIDIANIYVKAGHLVNTESSAVVEAEKSI 312

Query: 955  TQRECITYDLLIILYTGLNNKERIDQIWKSLRMAPMKMTSRNYICITSSYLMLGYCKEAG 1134
            TQRE ITYD LIILY GL +K+++DQIWKSLRM   KMT+RN++CI SSY+MLG+ KEAG
Sbjct: 313  TQREWITYDFLIILYAGLRDKDKVDQIWKSLRMTKQKMTNRNFVCILSSYMMLGHLKEAG 372

Query: 1135 EVLEQWKQSTTTDFDHHACSRLLDAFTGAGLVEKAEMLRALMIQDGWDTAN 1287
            EVL+QWK+STTTDFD  ACSRLLDAF+G+GL E A     L+I+   D  N
Sbjct: 373  EVLDQWKKSTTTDFDLSACSRLLDAFSGSGLTEIANDFHMLLIERNCDPTN 423


>ref|XP_003531533.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 395

 Score =  486 bits (1252), Expect = e-135
 Identities = 237/356 (66%), Positives = 292/356 (82%), Gaps = 2/356 (0%)
 Frame = +1

Query: 205  ANDDLEESKP--EDDLKSRIFRLRFSKRSATNALEKWASEGNQVTISELRNIAKDLRKSQ 378
            ++D +EES    +DDL+SRIFRLR  KRSATN L+KW  +GN VT+S+LR+I+K+LR+SQ
Sbjct: 32   SSDLVEESVEGVDDDLRSRIFRLRLPKRSATNVLQKWVLQGNPVTLSQLRDISKELRRSQ 91

Query: 379  RYKHALEISEWMIRHQEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLTVKSGETYTA 558
            RYKHALEISEWM+ H+E+ELSDSDY  RIDL TKVFGIDAAERYFEGLPL  K+ ETYTA
Sbjct: 92   RYKHALEISEWMVSHEEYELSDSDYAARIDLTTKVFGIDAAERYFEGLPLATKTAETYTA 151

Query: 559  LLHSYAGAKLTEKAERLFDRVKEANVTLNAMIYNEMMTLYMSVGQLEKVPSVIEELKRRK 738
            LLHSYAGAKLT+KAE L+ R+K++N++ +A+ YNEMMTLYMSVGQ EKVPSV+EELK++K
Sbjct: 152  LLHSYAGAKLTKKAEELYQRIKDSNLSFDALTYNEMMTLYMSVGQFEKVPSVVEELKQQK 211

Query: 739  VSPDLFTYNLWISSCAANLDIDSVAKVLDEMSCDSNSNEGWMIYRQLTNIYVTAGNLVNS 918
            VSPD+FTYNLWIS CAA L+ID V ++LDEMS  + SNE W+ Y  L NIY++ G+L N+
Sbjct: 212  VSPDIFTYNLWISYCAAILNIDEVRRILDEMSHGAGSNESWIRYLNLANIYISVGHLDNA 271

Query: 919  QCNSLVETEKKITQRECITYDLLIILYTGLNNKERIDQIWKSLRMAPMKMTSRNYICITS 1098
              N+LVETEK+ITQR+ ITYD LIILY GL +K+++DQIW SLRM   KM SRNYICI S
Sbjct: 272  SSNTLVETEKRITQRQWITYDFLIILYGGLGSKDKLDQIWNSLRMTKQKMISRNYICIIS 331

Query: 1099 SYLMLGYCKEAGEVLEQWKQSTTTDFDHHACSRLLDAFTGAGLVEKAEMLRALMIQ 1266
            SYLMLG+ KE GEV++QWKQSTTTDFD  AC +++ AF   GL E A  L  ++I+
Sbjct: 332  SYLMLGHTKEVGEVIDQWKQSTTTDFDMLACKKIMVAFRDMGLAEIANNLNMILIE 387


>ref|XP_003545705.1| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial-like [Glycine max]
          Length = 399

 Score =  484 bits (1247), Expect = e-134
 Identities = 246/393 (62%), Positives = 306/393 (77%), Gaps = 1/393 (0%)
 Frame = +1

Query: 91   MAIRSLCMTLKRTLIERNSSPINPQTRGXXXXXXXXXXANDDLEES-KPEDDLKSRIFRL 267
            MA RSL ++L+R    RNS       R           ++D +EES + +DDL+SRIFRL
Sbjct: 1    MAHRSLFLSLRRFSSCRNSGLACVLNR--TRFVSSGAVSSDLVEESVEGDDDLRSRIFRL 58

Query: 268  RFSKRSATNALEKWASEGNQVTISELRNIAKDLRKSQRYKHALEISEWMIRHQEFELSDS 447
            R  KRSATN L+KW  +GN +T+S+LR+I+K+LR+SQRYKHALEISEWM+ ++E+ELSDS
Sbjct: 59   RLPKRSATNVLQKWVLQGNPITLSQLRDISKELRRSQRYKHALEISEWMVSNEEYELSDS 118

Query: 448  DYGVRIDLMTKVFGIDAAERYFEGLPLTVKSGETYTALLHSYAGAKLTEKAERLFDRVKE 627
            DY VRIDLMT+VFGIDAAERYFEGLPL  K+ ETYTALLHSYAGAKLTEKAE L+ R+K+
Sbjct: 119  DYAVRIDLMTQVFGIDAAERYFEGLPLATKTTETYTALLHSYAGAKLTEKAEELYQRIKD 178

Query: 628  ANVTLNAMIYNEMMTLYMSVGQLEKVPSVIEELKRRKVSPDLFTYNLWISSCAANLDIDS 807
            +N++ +A+ YNEMMTLYMSVGQ EKVP V+EELK++KVSPD+FTYNLWISSCAA L+ID 
Sbjct: 179  SNLSFDALTYNEMMTLYMSVGQFEKVPIVVEELKQQKVSPDIFTYNLWISSCAAILNIDE 238

Query: 808  VAKVLDEMSCDSNSNEGWMIYRQLTNIYVTAGNLVNSQCNSLVETEKKITQRECITYDLL 987
            V ++LDEMS  + SNE W+ Y  L NIY++  +L N+  N+LVETEK+ITQR+ ITYD L
Sbjct: 239  VRRILDEMSHGAGSNESWIRYLNLANIYISVAHLDNASSNTLVETEKRITQRQWITYDFL 298

Query: 988  IILYTGLNNKERIDQIWKSLRMAPMKMTSRNYICITSSYLMLGYCKEAGEVLEQWKQSTT 1167
            IILY GL +K+++DQIW SL M   KM SRNY+CI SSYLMLG  KE GEV++QWKQSTT
Sbjct: 299  IILYGGLGSKDKLDQIWNSLGMTKQKMISRNYMCIISSYLMLGLTKEVGEVIDQWKQSTT 358

Query: 1168 TDFDHHACSRLLDAFTGAGLVEKAEMLRALMIQ 1266
            TDFD  AC ++L AF   GL E A  L  ++I+
Sbjct: 359  TDFDMLACKKILVAFRDIGLAEIANNLNVILIE 391


>ref|XP_002268952.2| PREDICTED: pentatricopeptide repeat-containing protein At5g09450,
            mitochondrial [Vitis vinifera]
          Length = 396

 Score =  479 bits (1234), Expect = e-133
 Identities = 238/353 (67%), Positives = 286/353 (81%), Gaps = 3/353 (0%)
 Frame = +1

Query: 217  LEES--KPE-DDLKSRIFRLRFSKRSATNALEKWASEGNQVTISELRNIAKDLRKSQRYK 387
            LEES   PE DDLKSRIF+LR  KRS TN L++W  EGNQV ISELRNI+K+LR++QRYK
Sbjct: 34   LEESPNSPENDDLKSRIFKLRLPKRSVTNVLQRWLGEGNQVHISELRNISKELRRAQRYK 93

Query: 388  HALEISEWMIRHQEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLTVKSGETYTALLH 567
            HALEISEWM+ H EFELSDSD  VRIDLMT+VFGIDAAERYFEGLP   K+ ETYTALLH
Sbjct: 94   HALEISEWMVSHDEFELSDSDNAVRIDLMTRVFGIDAAERYFEGLPSAAKTSETYTALLH 153

Query: 568  SYAGAKLTEKAERLFDRVKEANVTLNAMIYNEMMTLYMSVGQLEKVPSVIEELKRRKVSP 747
            SYAGAKL EKAE L++R+KE+NV LN ++YNEMMTLYMSVGQ+EKV  V+EELKR+KV P
Sbjct: 154  SYAGAKLAEKAEELYERIKESNVPLNILLYNEMMTLYMSVGQVEKVSLVVEELKRQKVVP 213

Query: 748  DLFTYNLWISSCAANLDIDSVAKVLDEMSCDSNSNEGWMIYRQLTNIYVTAGNLVNSQCN 927
            DLFTYNLW+SSCAA LDID V ++L EMS +S++N+GW+ YR L NIY+ AG+LVNS  N
Sbjct: 214  DLFTYNLWVSSCAATLDIDGVRRILKEMSNNSSANDGWVRYRNLANIYIMAGHLVNSASN 273

Query: 928  SLVETEKKITQRECITYDLLIILYTGLNNKERIDQIWKSLRMAPMKMTSRNYICITSSYL 1107
            S+VE     TQR+ ITYD LIILY GL NK++IDQIWKSL+M   K+ SR+Y+CI SSY+
Sbjct: 274  SVVEAGTNTTQRDWITYDFLIILYAGLGNKDKIDQIWKSLKMTKQKIKSRSYVCILSSYV 333

Query: 1108 MLGYCKEAGEVLEQWKQSTTTDFDHHACSRLLDAFTGAGLVEKAEMLRALMIQ 1266
            MLG+ K+ G V+++WK+STTTDFD     RLLDAF    L+E+AE    L+I+
Sbjct: 334  MLGHIKDVGIVIDEWKKSTTTDFDISVFYRLLDAFAELRLIEEAETFHKLLIR 386


>ref|XP_002323959.1| predicted protein [Populus trichocarpa] gi|222866961|gb|EEF04092.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  479 bits (1232), Expect = e-132
 Identities = 234/352 (66%), Positives = 285/352 (80%), Gaps = 2/352 (0%)
 Frame = +1

Query: 217  LEESKPEDDLKSRIFRLRFSKRSATNALEKWASEGNQVTISELRNIAKDLRKSQRYKHAL 396
            L+  + EDDLK RIFRLR  KRS TN ++KW  EGN V+ SELR+I+K+LRKSQR+KHAL
Sbjct: 1    LKSKENEDDLKGRIFRLRLPKRSVTNVIDKWVREGNTVSSSELRHISKELRKSQRFKHAL 60

Query: 397  EISEWMIRHQEFELSDSDYGVRIDLMTKVFGIDAAERYFEGLPLTVKSGETYTALLHSYA 576
            EISEWM+ H+EFELSD+D+  RIDLMTKVFG+DAAERYF+GLPL  K+ ETYTALLHSYA
Sbjct: 61   EISEWMVAHEEFELSDTDHASRIDLMTKVFGVDAAERYFDGLPLAAKTTETYTALLHSYA 120

Query: 577  GAKLTEKAERLFDRVKEANVTLNAMIYNEMMTLYMSVGQLEKVPSVIEELKRRKVSPDLF 756
             AKL EKAE  + R+K +N+   A++YNEMMTLYMSVGQLEKV  V+EELK +KV+PD+F
Sbjct: 121  AAKLIEKAEEFYKRIKGSNLPFTALMYNEMMTLYMSVGQLEKVSQVVEELKHQKVAPDIF 180

Query: 757  TYNLWISSCAANLDIDSVAKVLDEMSCDSNSNEGWMIYRQLTNIYVTAGNLVNSQCN--S 930
            TYNLWISSCAA L+ID V ++LDEMS DS  N+ WM Y ++ NIYVTAG+LVN++ +  +
Sbjct: 181  TYNLWISSCAAALNIDKVRRILDEMSQDSGVNDDWMRYIKIVNIYVTAGHLVNAESSTAA 240

Query: 931  LVETEKKITQRECITYDLLIILYTGLNNKERIDQIWKSLRMAPMKMTSRNYICITSSYLM 1110
            +VE EKKITQRE ITYD L+ILY GL  K++IDQIWKSLRM   KMTSRN++CI SSYLM
Sbjct: 241  VVEAEKKITQREWITYDFLVILYAGLGKKDKIDQIWKSLRMTNQKMTSRNFVCILSSYLM 300

Query: 1111 LGYCKEAGEVLEQWKQSTTTDFDHHACSRLLDAFTGAGLVEKAEMLRALMIQ 1266
            LG+ KE GE+++QWKQSTTTDFD  AC+RLLDA +  GL E A     L+I+
Sbjct: 301  LGHLKEVGEIVDQWKQSTTTDFDISACNRLLDAISCLGLTEIANNFHMLLIE 352