BLASTX nr result

ID: Cimicifuga21_contig00012076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012076
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251...    82   5e-18
emb|CBI33003.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002518417.1| conserved hypothetical protein [Ricinus comm...    71   8e-14
ref|XP_002333437.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-13
ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|1...    74   2e-11

>ref|XP_002270044.1| PREDICTED: uncharacterized protein LOC100251709 [Vitis vinifera]
          Length = 340

 Score = 82.0 bits (201), Expect(2) = 5e-18
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -3

Query: 452 PQVLSPCNSLRRSNDPNSPEFEFWMVRNPSFPQPHLLSADKLIVDGV 312
           PQ LSP +S RRS+D NSPEFEFWMVRNPSFPQP+LLSAD+L VDGV
Sbjct: 10  PQTLSPSSSGRRSSDSNSPEFEFWMVRNPSFPQPNLLSADELFVDGV 56



 Score = 33.9 bits (76), Expect(2) = 5e-18
 Identities = 22/53 (41%), Positives = 30/53 (56%)
 Frame = -2

Query: 225 HSEAFEADPKPLKVEKDVETEPDPEVSQPGPEPPDXXXXXXXSKRWRDIFKMG 67
           +SEA +++P P+      +TEP+P    PGPE          SKRW+DIFK G
Sbjct: 77  NSEAPDSEP-PIP-----DTEPEPG---PGPEISSAAPASTASKRWKDIFKKG 120


>emb|CBI33003.3| unnamed protein product [Vitis vinifera]
          Length = 203

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = -3

Query: 452 PQVLSPCNSLRRSNDPNSPEFEFWMVRNPSFPQPHLLSADKLIVDGV 312
           PQ LSP +S RRS+D NSPEFEFWMVRNPSFPQP+LLSAD+L VDGV
Sbjct: 10  PQTLSPSSSGRRSSDSNSPEFEFWMVRNPSFPQPNLLSADELFVDGV 56


>ref|XP_002518417.1| conserved hypothetical protein [Ricinus communis]
           gi|223542262|gb|EEF43804.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 358

 Score = 70.9 bits (172), Expect(2) = 8e-14
 Identities = 34/56 (60%), Positives = 41/56 (73%), Gaps = 2/56 (3%)
 Frame = -3

Query: 473 PNPETQNPQVLSPCNSL--RRSNDPNSPEFEFWMVRNPSFPQPHLLSADKLIVDGV 312
           P     + + LSPC S   RRS+D NSPEFEFW V NPSFP+P++LSAD+L VDGV
Sbjct: 4   PRKIASSQEPLSPCTSSGRRRSSDSNSPEFEFWRVPNPSFPEPNILSADELFVDGV 59



 Score = 30.8 bits (68), Expect(2) = 8e-14
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -2

Query: 228 HHSEAFEADPKPLKVEKDVETEPDPEVSQPGPEPPDXXXXXXXSKRWRDIFKMG 67
           +H    + DP+P   + +   +P P++S               SKRW+DIFK G
Sbjct: 72  NHDPGPQPDPEPPNSQSE---KPGPQISHKSIAAESVGTPLTASKRWKDIFKKG 122


>ref|XP_002333437.1| predicted protein [Populus trichocarpa] gi|222836608|gb|EEE75001.1|
           predicted protein [Populus trichocarpa]
          Length = 339

 Score = 70.5 bits (171), Expect(2) = 1e-13
 Identities = 37/53 (69%), Positives = 45/53 (84%), Gaps = 4/53 (7%)
 Frame = -3

Query: 458 QNPQV-LSPCNSLRR--SNDPNSP-EFEFWMVRNPSFPQPHLLSADKLIVDGV 312
           + PQV LSPC+S RR  S+D NSP EFEFWMV+NPSFPQP+L++AD+L VDGV
Sbjct: 10  KEPQVILSPCSSRRRRASSDSNSPPEFEFWMVQNPSFPQPNLVTADELFVDGV 62



 Score = 30.8 bits (68), Expect(2) = 1e-13
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
 Frame = -2

Query: 228 HHSEAFEADPKPLKVEKDVETEPDPEVSQPGPEP-----PDXXXXXXXSKRWRD-IFKMG 67
           HH      +  P   + D  TEP+P  SQP PEP              SKRW+D IFK G
Sbjct: 70  HHPNNNNNNNHPPDPDPD-STEPEPPSSQPDPEPEISPASITMEPTSSSKRWKDIIFKKG 128


>ref|XP_002331562.1| predicted protein [Populus trichocarpa] gi|118484607|gb|ABK94177.1|
           unknown [Populus trichocarpa]
           gi|222873786|gb|EEF10917.1| predicted protein [Populus
           trichocarpa]
          Length = 358

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/54 (70%), Positives = 43/54 (79%), Gaps = 5/54 (9%)
 Frame = -3

Query: 458 QNPQV-LSPCNSLRR----SNDPNSPEFEFWMVRNPSFPQPHLLSADKLIVDGV 312
           + PQV LSPC+S RR    S   NSPEFEFWMVRNPSFPQP+L+SAD+L VDGV
Sbjct: 10  KEPQVILSPCSSARRRRRTSTCSNSPEFEFWMVRNPSFPQPNLVSADELFVDGV 63


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