BLASTX nr result

ID: Cimicifuga21_contig00012071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012071
         (1332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265221.2| PREDICTED: uncharacterized protein LOC100263...   130   8e-28
emb|CAN71153.1| hypothetical protein VITISV_022650 [Vitis vinifera]   128   3e-27
ref|XP_002531751.1| hypothetical protein RCOM_0301280 [Ricinus c...    94   8e-17
ref|XP_002330534.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-16

>ref|XP_002265221.2| PREDICTED: uncharacterized protein LOC100263414 [Vitis vinifera]
          Length = 1576

 Score =  130 bits (327), Expect = 8e-28
 Identities = 101/305 (33%), Positives = 145/305 (47%), Gaps = 14/305 (4%)
 Frame = +3

Query: 18   STSNPILRLMGKNLMVVNKDDDASVKL--RQPDSSNTCESTKCTNLLRFSPRGVSTQDCV 191
            S SNPILRLMGKNLMVVNKD+ A ++L   QP   + C + +  N    S       D  
Sbjct: 1278 SGSNPILRLMGKNLMVVNKDEVAPMQLGETQPVPLSNCPNPQFLNFSGVSHGNAQNPDYH 1337

Query: 192  YSHYLVPEGSVVSSQDSCNPQ--------PHFFSDNCSRR--RSMIGKHNNTDMGEN-DS 338
            Y H+++P GS    QD  N          P+ F  +C+ +  +++ G   N  MG    +
Sbjct: 1338 YFHHMIPPGSFRYIQDPHNTVGQCSGIRLPNSFEGHCNPKTPQALEGMFPNKHMGGAFAA 1397

Query: 339  SLTWHGLVSRTNLQIQQKKHISRLDSFP-YNVERMVAPAHLQHLNHVSAAQMVGNPTREV 515
            SL  H      NL  QQ +  +RL +   Y++E+     H Q+ N  S    +G+  +E+
Sbjct: 1398 SLGPHDYKGEYNLVTQQNRPTTRLGATSVYHMEKATNSPHPQYRNSSS----MGSSIKEI 1453

Query: 516  IVIDDSPESEAELSKTKAKHRDTDGTHRXXXXXXXXXXXXXXXTYQSLAQSAFRFHTSSN 695
            I+IDD+PESEA+ +   AKH       R                Y     +    + S +
Sbjct: 1454 IIIDDTPESEADSTTDDAKHTKC---LRESQVPSADNLIPAPPNYNLRHLNPLSRYQSQD 1510

Query: 696  PFSLVEPLVGTKRNLSASHLAGSSTSPTKWGGTSKGSGMTLRNPFTSTSSSTCDMSQTMY 875
            P SL E                ++TSP KWG TS+ SG+  RNPF ++SSST  +   +Y
Sbjct: 1511 PSSLGESPTAHSNCFIVPPSRRTNTSPVKWGCTSESSGIIQRNPFIASSSSTGHLRSDLY 1570

Query: 876  HSPSL 890
            +SPSL
Sbjct: 1571 YSPSL 1575


>emb|CAN71153.1| hypothetical protein VITISV_022650 [Vitis vinifera]
          Length = 1460

 Score =  128 bits (322), Expect = 3e-27
 Identities = 100/305 (32%), Positives = 144/305 (47%), Gaps = 14/305 (4%)
 Frame = +3

Query: 18   STSNPILRLMGKNLMVVNKDDDASVKL--RQPDSSNTCESTKCTNLLRFSPRGVSTQDCV 191
            S SNPILRLMGKNLMVVNKD+ A ++L   QP   + C + +  N    S       D  
Sbjct: 1162 SGSNPILRLMGKNLMVVNKDEVAPMQLGETQPVPLSNCPNPQFLNFSGVSHGNAQNPDYH 1221

Query: 192  YSHYLVPEGSVVSSQDSCNPQ--------PHFFSDNCSRR--RSMIGKHNNTDMGEN-DS 338
            Y H+++P GS    QD  N          P+ F  +C+ +  +++ G   N  MG    +
Sbjct: 1222 YFHHMIPPGSFRYIQDPHNTVGQCSGIRLPNSFEGHCNPKTPQALEGMFPNKHMGGAFAA 1281

Query: 339  SLTWHGLVSRTNLQIQQKKHISRLDSFP-YNVERMVAPAHLQHLNHVSAAQMVGNPTREV 515
            SL  H      NL  QQ +  +RL +   Y++E+     H Q+ N  S    +G+  +E+
Sbjct: 1282 SLGPHDYKGEYNLVTQQNRPTTRLGATSVYHMEKATNSPHPQYRNSSS----MGSSIKEI 1337

Query: 516  IVIDDSPESEAELSKTKAKHRDTDGTHRXXXXXXXXXXXXXXXTYQSLAQSAFRFHTSSN 695
            I+IDD+PESEA+ +   AKH       R                Y     +    + S +
Sbjct: 1338 IIIDDTPESEADSTTDDAKHTKC---LRESQVPSADNLIPAPPNYNLRHLNPLSRYQSQD 1394

Query: 696  PFSLVEPLVGTKRNLSASHLAGSSTSPTKWGGTSKGSGMTLRNPFTSTSSSTCDMSQTMY 875
            P  L E                ++TSP KWG TS+ SG+  RNPF ++SSST  +   +Y
Sbjct: 1395 PSXLGESPTAHSNCFIVPPSRRTNTSPVKWGCTSESSGIIQRNPFIASSSSTGHLRSDLY 1454

Query: 876  HSPSL 890
            +SPSL
Sbjct: 1455 YSPSL 1459


>ref|XP_002531751.1| hypothetical protein RCOM_0301280 [Ricinus communis]
            gi|223528587|gb|EEF30607.1| hypothetical protein
            RCOM_0301280 [Ricinus communis]
          Length = 1475

 Score = 94.0 bits (232), Expect = 8e-17
 Identities = 89/309 (28%), Positives = 139/309 (44%), Gaps = 20/309 (6%)
 Frame = +3

Query: 18   STSNPILRLMGKNLMVVNKDDDASVKLR--QPDSSNTCESTKCTNLLRFSPRGVSTQDCV 191
            S SNP+LRLMGKNLMVVNKD+DA V L   QP   N   + +  +  R  P  +   +C 
Sbjct: 1118 SASNPVLRLMGKNLMVVNKDEDAPVPLGGIQPHVQNNHHTPQFADFSRPFPGNIQNWECH 1177

Query: 192  YSHYLVPEGSVVSSQDSCNPQPHFFSDNCS---------------RRRSMIGKHNNTDMG 326
              H   P+  V+  Q+S       F    S               R  + I +  +TD G
Sbjct: 1178 PLHPTGPQVPVIFGQNSHKVAGQCFDGGLSNSFRSQFDSSVPLHVRLPAGIFQDQHTDYG 1237

Query: 327  ENDSSLTWH--GLVSRTNLQIQQKKHISRLDSFPYNVERMVAPAHLQHLNHVSAAQMVGN 500
               +S+ +H   + SR N +++ + + S +D    N+E+++A    +H  H  ++    N
Sbjct: 1238 LATTSMDYHDYNVPSRHN-RLKNRLNSSSMD----NMEKVIATPD-RHCQHSDSSV---N 1288

Query: 501  PTREVIVIDDSPESEAELSKTKAKHRDTDGTHRXXXXXXXXXXXXXXXTYQSLAQSAFRF 680
            P +E+I+IDD PESE  +    AK+       R                YQS      + 
Sbjct: 1289 PVKEIIIIDDIPESENIVISDGAKYAQ---GRRESQISYNLNRVHPYNCYQS------QE 1339

Query: 681  HTSSNPFSLVEPLVGTKRNLSASHLAGSSTSPTKWGGTSKGSGMTLRNPFTSTSSSTCDM 860
            HT      +V        +L  + +   +T P +WG  S+ SG+  R+PF + SSS   +
Sbjct: 1340 HTPIGKSPMVH-----GASLHVTPIEPGNTCPIRWGCISEDSGVLQRSPFPAASSSPGHL 1394

Query: 861  -SQTMYHSP 884
             S  +++SP
Sbjct: 1395 RSPALHYSP 1403


>ref|XP_002330534.1| predicted protein [Populus trichocarpa] gi|222872092|gb|EEF09223.1|
            predicted protein [Populus trichocarpa]
          Length = 1498

 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 81/311 (26%), Positives = 125/311 (40%), Gaps = 21/311 (6%)
 Frame = +3

Query: 18   STSNPILRLMGKNLMVVNKDDDASVKLRQ--PDSSNTCESTKCTNLLRFSPRGVSTQDCV 191
            S SNPILRLMGKNLMVVNK+D+ S+   Q  P + N  +++    +   SP  +   D  
Sbjct: 1196 SASNPILRLMGKNLMVVNKEDNVSMPNGQVRPCAQNVNQTSHIPTISAVSPGNIQNLDSH 1255

Query: 192  YSHYLVPEGSVVSSQDSCNPQPHFFSDNCSRRRSMIGKHNNTDMGENDS----------- 338
              H + P+GSV+ S+D             S      G H ++ + +  S           
Sbjct: 1256 SFHPMTPQGSVIFSRDPYKTAVQRLDAGFS---DSFGSHTDSKLSQAPSKLPAGMFCDQH 1312

Query: 339  -------SLTWHGLVSRTNLQIQQKKHISRLDSFPYNVERMVAPAHLQHLNHVSAAQMVG 497
                   S+  H      N    Q +   RL++FP    +       +H      A    
Sbjct: 1313 SDGGLAPSIKPHQCKEDYNFSSSQNRLKRRLETFPTCTMKRATETPDRHCKR---ADSFT 1369

Query: 498  NPTREVIVIDDSPESEAELSKTKAKHRDTDGTHRXXXXXXXXXXXXXXXTYQSLAQSAFR 677
            +P +E+I+IDD PES+  +     K+ +     R                Y     + F 
Sbjct: 1370 HPVKEIIIIDDVPESQTVVMSDITKYNE---GWRERQVFPSGISVPTIPIYNMTNVNPFT 1426

Query: 678  FHTSSNPFSLVEPLVGTKRNLSASHLAGSSTSPTKWGGTSKGSGMTLRNPFTSTSSSTCD 857
             + S     +    V    +  AS     +TSP +WG    G G    NPF + S+S+  
Sbjct: 1427 CYQSQEHPPIGGTPVAHNGSFHASTTRLVNTSPVRWGCPPDGPGALQMNPFVAASNSSGH 1486

Query: 858  M-SQTMYHSPS 887
            + S ++Y+SPS
Sbjct: 1487 LRSASLYYSPS 1497


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