BLASTX nr result

ID: Cimicifuga21_contig00012048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012048
         (2370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly f...   555   e-174
ref|XP_002522906.1| electron transporter, putative [Ricinus comm...   538   e-168
ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|2...   538   e-168
ref|XP_002307904.1| predicted protein [Populus trichocarpa] gi|2...   541   e-167
ref|XP_004139529.1| PREDICTED: cytosolic Fe-S cluster assembly f...   536   e-167

>ref|XP_003635380.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Vitis
            vinifera] gi|297744923|emb|CBI38438.3| unnamed protein
            product [Vitis vinifera]
          Length = 478

 Score =  555 bits (1431), Expect(2) = e-174
 Identities = 281/381 (73%), Positives = 315/381 (82%), Gaps = 1/381 (0%)
 Frame = -1

Query: 2013 MSEKFSSTLRIGDLNDFIAPSQGCIVSLKGMKTT-TKQERLEKPKQEKVAHIVNQEPVKI 1837
            MSEKFS+TLRIGDLNDFIAPSQGC+VSLKG+K    K E+ E     K A   N EPVKI
Sbjct: 1    MSEKFSATLRIGDLNDFIAPSQGCVVSLKGLKAAPAKPEKAEVVTGTKSA---NTEPVKI 57

Query: 1836 SLKDCLACSGCITSAETVMLEKQSLDEFLLNIESGKAVIISLSPQSRASLAAHFGLSPPQ 1657
            SLKDCLACSGCITSAETVMLEKQS+DEFL NI  GKAVI+SLSPQSRAS A HFGLSP Q
Sbjct: 58   SLKDCLACSGCITSAETVMLEKQSMDEFLFNINKGKAVIVSLSPQSRASFAIHFGLSPLQ 117

Query: 1656 VFRKLTTFFKSLGVKAIYDTSCSRDLSLIESCNEFVSRYKQHLLANGEXXXXXXXXXXXS 1477
            V RKLTTFFKSLGVKA++DTSCSRDLSLIESCN F+SRYKQH     E           +
Sbjct: 118  VLRKLTTFFKSLGVKAVFDTSCSRDLSLIESCNAFISRYKQHHSTEDEKCKTSLPMLSSA 177

Query: 1476 CPGWICYAEKTLGSYILPYISSVKSPQQTIGAIIKHHVCQTMGLSLDTIYHVTIMPCYDK 1297
            CPGWICYAEKTLGSYILPYISSVKSPQQTIG  IK+++CQ MG   D +YHV++MPCYDK
Sbjct: 178  CPGWICYAEKTLGSYILPYISSVKSPQQTIGVTIKNYLCQKMGFRPDEVYHVSVMPCYDK 237

Query: 1296 KLEAARDDFVFSKDGQGANANEVADLSFAEVDSVLTSGEVMDLIRLKSVDLKALEESPLD 1117
            KLEAARDDFVF  D  G   +E   L   EVDSVLTSGEV++LI+LKSVD K LEESPLD
Sbjct: 238  KLEAARDDFVFEVDSPG-GVHENTGLRITEVDSVLTSGEVLELIQLKSVDFKNLEESPLD 296

Query: 1116 NLLTNVDEKGHLYGVSGSSGGYAETIFRHAAKTIFGTQIEGPLNFKTIRNSDFREVTLEV 937
             LLTNV+E+GHLYGV GSSGGYA+TIFR+AAKT+FG +++GPL+FKT+RNSDFREVTLE+
Sbjct: 297  RLLTNVNEEGHLYGVQGSSGGYADTIFRYAAKTLFGRELKGPLDFKTVRNSDFREVTLEI 356

Query: 936  EGKVVLKFALCYGFRNLQNVV 874
            EG+ +LKFALCYGFRNLQN+V
Sbjct: 357  EGQTMLKFALCYGFRNLQNIV 377



 Score = 86.7 bits (213), Expect(2) = e-174
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = -2

Query: 785 KIGKCDYHFLEVMACPSGCLNGGGQIKPKEGQSVKDLLQSVE 660
           KIGKCDYHFLEVMACPSGCLNGGGQIKPK GQS KDL+QS+E
Sbjct: 381 KIGKCDYHFLEVMACPSGCLNGGGQIKPKAGQSAKDLIQSLE 422


>ref|XP_002522906.1| electron transporter, putative [Ricinus communis]
            gi|223537891|gb|EEF39506.1| electron transporter,
            putative [Ricinus communis]
          Length = 475

 Score =  538 bits (1387), Expect(2) = e-168
 Identities = 267/380 (70%), Positives = 314/380 (82%)
 Frame = -1

Query: 2013 MSEKFSSTLRIGDLNDFIAPSQGCIVSLKGMKTTTKQERLEKPKQEKVAHIVNQEPVKIS 1834
            MSEKFS TLRIGDL+DFIAPSQ C+VSLKG+K+ +K+  +      +V++    EPVKIS
Sbjct: 1    MSEKFSPTLRIGDLSDFIAPSQACVVSLKGLKSNSKKPEV------RVSNKQQSEPVKIS 54

Query: 1833 LKDCLACSGCITSAETVMLEKQSLDEFLLNIESGKAVIISLSPQSRASLAAHFGLSPPQV 1654
            LKDCLACSGCITSAETVMLEKQSLDEFL NI+ GKAV+ISLSPQSRASLAAHF +SPPQV
Sbjct: 55   LKDCLACSGCITSAETVMLEKQSLDEFLSNIDKGKAVVISLSPQSRASLAAHFDISPPQV 114

Query: 1653 FRKLTTFFKSLGVKAIYDTSCSRDLSLIESCNEFVSRYKQHLLANGEXXXXXXXXXXXSC 1474
            F+KLTTFFKSLGVKA++DTS SRD++LIE+CNEF++RYKQ    + E           +C
Sbjct: 115  FKKLTTFFKSLGVKAVFDTSSSRDITLIETCNEFITRYKQSQSNDDERSKSALPMLSSAC 174

Query: 1473 PGWICYAEKTLGSYILPYISSVKSPQQTIGAIIKHHVCQTMGLSLDTIYHVTIMPCYDKK 1294
            PGWICYAEK LGSYILPYIS VKSPQQ +GA IKH +CQ MGL  D +YHVT+MPCYDKK
Sbjct: 175  PGWICYAEKQLGSYILPYISPVKSPQQIVGATIKHQICQKMGLRPDEVYHVTVMPCYDKK 234

Query: 1293 LEAARDDFVFSKDGQGANANEVADLSFAEVDSVLTSGEVMDLIRLKSVDLKALEESPLDN 1114
            LEA RDDFV   + Q  N + +  +  AEVDSVLTSGEV+DLI+LK+VD  ALEESPLD 
Sbjct: 235  LEAVRDDFVIELESQEENGDSL--VRIAEVDSVLTSGEVLDLIKLKAVDFPALEESPLDR 292

Query: 1113 LLTNVDEKGHLYGVSGSSGGYAETIFRHAAKTIFGTQIEGPLNFKTIRNSDFREVTLEVE 934
            + +NV+E+GHLYGVSGSSGGYAET+FR+A KT+FG +I GPL FKTIRN+DFREVTLEV+
Sbjct: 293  MFSNVNEEGHLYGVSGSSGGYAETVFRNATKTLFGIEINGPLTFKTIRNTDFREVTLEVD 352

Query: 933  GKVVLKFALCYGFRNLQNVV 874
            G V+LKFALCYGF+NLQN+V
Sbjct: 353  GHVLLKFALCYGFQNLQNIV 372



 Score = 81.3 bits (199), Expect(2) = e-168
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = -2

Query: 785 KIGKCDYHFLEVMACPSGCLNGGGQIKPKEGQSVKDLLQSVE 660
           K+ KCDYHF+EVMACPSGCLNGGGQIKPK GQS KDLLQS+E
Sbjct: 376 KMQKCDYHFVEVMACPSGCLNGGGQIKPKPGQSPKDLLQSLE 417


>ref|XP_002323132.1| predicted protein [Populus trichocarpa] gi|222867762|gb|EEF04893.1|
            predicted protein [Populus trichocarpa]
          Length = 471

 Score =  538 bits (1387), Expect(2) = e-168
 Identities = 266/380 (70%), Positives = 315/380 (82%)
 Frame = -1

Query: 2013 MSEKFSSTLRIGDLNDFIAPSQGCIVSLKGMKTTTKQERLEKPKQEKVAHIVNQEPVKIS 1834
            MSEKFS TLRIGDL+DFIAPSQ C+VSLKG+KTT        P    +A+    +PVKIS
Sbjct: 1    MSEKFSPTLRIGDLSDFIAPSQACVVSLKGLKTTA-------PNTVAIANKEQTDPVKIS 53

Query: 1833 LKDCLACSGCITSAETVMLEKQSLDEFLLNIESGKAVIISLSPQSRASLAAHFGLSPPQV 1654
            LKDCLACSGCITSAETVMLEKQSLD+FL NI+ GKA+I+SLSPQSRASLA +FG+SP QV
Sbjct: 54   LKDCLACSGCITSAETVMLEKQSLDDFLSNIDKGKAIIVSLSPQSRASLAVYFGISPLQV 113

Query: 1653 FRKLTTFFKSLGVKAIYDTSCSRDLSLIESCNEFVSRYKQHLLANGEXXXXXXXXXXXSC 1474
            F+KLTTFFKSLGVKA++DTS SRDL+LIE+CNEFV+RYKQ  L N E           +C
Sbjct: 114  FKKLTTFFKSLGVKAVFDTSSSRDLTLIETCNEFVNRYKQSQLNNNEKSNSALPMLSSAC 173

Query: 1473 PGWICYAEKTLGSYILPYISSVKSPQQTIGAIIKHHVCQTMGLSLDTIYHVTIMPCYDKK 1294
            PGWICYAEK LGSY+LP+ISSVKSPQQTIGA IKHH+CQ MGL  D +YHVT+MPCYDKK
Sbjct: 174  PGWICYAEKQLGSYVLPFISSVKSPQQTIGATIKHHICQKMGLRPDEVYHVTVMPCYDKK 233

Query: 1293 LEAARDDFVFSKDGQGANANEVADLSFAEVDSVLTSGEVMDLIRLKSVDLKALEESPLDN 1114
            LEA RDDFVF  + + AN N    L  AEVDSVLT+GEV+DLI+ K+VD + L++SPLD 
Sbjct: 234  LEAVRDDFVFEVEQEDANKN---GLRIAEVDSVLTTGEVLDLIKFKAVDFETLDDSPLDK 290

Query: 1113 LLTNVDEKGHLYGVSGSSGGYAETIFRHAAKTIFGTQIEGPLNFKTIRNSDFREVTLEVE 934
            +LTNV E+G+LYGV+GSSGGYA+T+FR+AA+ ++G +IEGPL FK++RN DFREVTLEV+
Sbjct: 291  MLTNVSEEGYLYGVAGSSGGYADTVFRNAARMLYGREIEGPLAFKSLRNMDFREVTLEVD 350

Query: 933  GKVVLKFALCYGFRNLQNVV 874
            GKVVLKFALCYGF+NLQN+V
Sbjct: 351  GKVVLKFALCYGFQNLQNIV 370



 Score = 80.9 bits (198), Expect(2) = e-168
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = -2

Query: 785 KIGKCDYHFLEVMACPSGCLNGGGQIKPKEGQSVKDLLQSVE 660
           KIGKCDYHF+EVMACPSGCLNGGGQIKPK  QS K+LLQS+E
Sbjct: 374 KIGKCDYHFVEVMACPSGCLNGGGQIKPKPQQSPKELLQSLE 415


>ref|XP_002307904.1| predicted protein [Populus trichocarpa] gi|222853880|gb|EEE91427.1|
            predicted protein [Populus trichocarpa]
          Length = 478

 Score =  541 bits (1395), Expect(2) = e-167
 Identities = 266/380 (70%), Positives = 315/380 (82%)
 Frame = -1

Query: 2013 MSEKFSSTLRIGDLNDFIAPSQGCIVSLKGMKTTTKQERLEKPKQEKVAHIVNQEPVKIS 1834
            MSEKFS TLRIGDL+DFIAPSQ C+VSLKG+KTTT   R     +  +A+    +PVKIS
Sbjct: 1    MSEKFSPTLRIGDLSDFIAPSQACVVSLKGLKTTTPNTRKRDKPEVAIANREQNDPVKIS 60

Query: 1833 LKDCLACSGCITSAETVMLEKQSLDEFLLNIESGKAVIISLSPQSRASLAAHFGLSPPQV 1654
            LKDCLACSGCITSAETVMLEKQSLDEFL NI+ GKA+I+SLSPQSRASLA +FG+SP QV
Sbjct: 61   LKDCLACSGCITSAETVMLEKQSLDEFLSNIDKGKAIIVSLSPQSRASLAFYFGISPLQV 120

Query: 1653 FRKLTTFFKSLGVKAIYDTSCSRDLSLIESCNEFVSRYKQHLLANGEXXXXXXXXXXXSC 1474
            F+KLTTFFKSLGVKA++DTSCSRDL+L+E+CNEF+ RYKQ  L   E           +C
Sbjct: 121  FKKLTTFFKSLGVKAVFDTSCSRDLTLVETCNEFLCRYKQSQLNIDEKSNPSLPMLSSAC 180

Query: 1473 PGWICYAEKTLGSYILPYISSVKSPQQTIGAIIKHHVCQTMGLSLDTIYHVTIMPCYDKK 1294
            PGWICYAEK LGSYILPY+SSVKSPQQTIGA IKHH+CQ MGL  D +YHVT+MPCYDKK
Sbjct: 181  PGWICYAEKQLGSYILPYVSSVKSPQQTIGATIKHHICQKMGLRPDEVYHVTVMPCYDKK 240

Query: 1293 LEAARDDFVFSKDGQGANANEVADLSFAEVDSVLTSGEVMDLIRLKSVDLKALEESPLDN 1114
            LEAAR DFVF  + + AN N    L   EVDSVLT+GEV+DLI+LK+VD++ L++SPLD 
Sbjct: 241  LEAARGDFVFEVEQEDANKN---SLRITEVDSVLTTGEVLDLIKLKAVDIETLDDSPLDK 297

Query: 1113 LLTNVDEKGHLYGVSGSSGGYAETIFRHAAKTIFGTQIEGPLNFKTIRNSDFREVTLEVE 934
            +LTNV E+G+LYGV GSSGGYAET+ R+AA+ +FG +IEGPL F+++RN+DF EVTLEV+
Sbjct: 298  MLTNVSEEGYLYGVPGSSGGYAETVLRYAARMVFGREIEGPLAFRSLRNNDFCEVTLEVD 357

Query: 933  GKVVLKFALCYGFRNLQNVV 874
            GKVVLKFALCYGF+NLQN+V
Sbjct: 358  GKVVLKFALCYGFQNLQNIV 377



 Score = 77.0 bits (188), Expect(2) = e-167
 Identities = 32/42 (76%), Positives = 39/42 (92%)
 Frame = -2

Query: 785 KIGKCDYHFLEVMACPSGCLNGGGQIKPKEGQSVKDLLQSVE 660
           K+G+CDYHF+E+MACPSGCLNGGGQIKPK  QS ++LLQS+E
Sbjct: 381 KMGRCDYHFVEIMACPSGCLNGGGQIKPKPQQSPRELLQSLE 422


>ref|XP_004139529.1| PREDICTED: cytosolic Fe-S cluster assembly factor NARFL-like [Cucumis
            sativus] gi|449505551|ref|XP_004162505.1| PREDICTED:
            cytosolic Fe-S cluster assembly factor NARFL-like
            [Cucumis sativus]
          Length = 478

 Score =  536 bits (1382), Expect(2) = e-167
 Identities = 269/381 (70%), Positives = 310/381 (81%), Gaps = 1/381 (0%)
 Frame = -1

Query: 2013 MSEKFSSTLRIGDLNDFIAPSQGCIVSLKGMKTT-TKQERLEKPKQEKVAHIVNQEPVKI 1837
            MSEKFS+TLRIGDLNDFIAPSQ CIVSLKG+K T TK +++E          +  EPVKI
Sbjct: 1    MSEKFSATLRIGDLNDFIAPSQACIVSLKGLKATATKPDKVEVSASRMQ---LKAEPVKI 57

Query: 1836 SLKDCLACSGCITSAETVMLEKQSLDEFLLNIESGKAVIISLSPQSRASLAAHFGLSPPQ 1657
            SLKDCLACSGC+TSAETVMLEKQSLDEFL N+  GK VI+SLSPQSRASLA HFG+SP +
Sbjct: 58   SLKDCLACSGCVTSAETVMLEKQSLDEFLSNLNKGKVVIVSLSPQSRASLAVHFGISPLK 117

Query: 1656 VFRKLTTFFKSLGVKAIYDTSCSRDLSLIESCNEFVSRYKQHLLANGEXXXXXXXXXXXS 1477
            VF+KLTTFFKS+GVKAI+DTSCSRDL+LIE+CNEF++RY+     N E           +
Sbjct: 118  VFKKLTTFFKSMGVKAIFDTSCSRDLTLIEACNEFIARYRNSQQDNEEKCKSSVPMISSA 177

Query: 1476 CPGWICYAEKTLGSYILPYISSVKSPQQTIGAIIKHHVCQTMGLSLDTIYHVTIMPCYDK 1297
            CPGWICYAEK  GSYILPYISSVKSPQQ IG+I+KHH+CQ +G+  D +YHVT+MPCYDK
Sbjct: 178  CPGWICYAEKQHGSYILPYISSVKSPQQMIGSIVKHHMCQKLGIRSDDVYHVTVMPCYDK 237

Query: 1296 KLEAARDDFVFSKDGQGANANEVADLSFAEVDSVLTSGEVMDLIRLKSVDLKALEESPLD 1117
            KLEAAR+DFVF  D         A     EVDSVLTSGEV++LI++K VD K+LEESPLD
Sbjct: 238  KLEAAREDFVFQLDSANKTLEAEAH-RITEVDSVLTSGEVLELIQMKEVDFKSLEESPLD 296

Query: 1116 NLLTNVDEKGHLYGVSGSSGGYAETIFRHAAKTIFGTQIEGPLNFKTIRNSDFREVTLEV 937
             +LTNV+E+GHL+GVSGSSGGYAETIFRHAAK +FG  IEGPL FK IRNSDF+E+TLEV
Sbjct: 297  RMLTNVNEEGHLFGVSGSSGGYAETIFRHAAKILFGKDIEGPLEFKLIRNSDFQELTLEV 356

Query: 936  EGKVVLKFALCYGFRNLQNVV 874
            EGK +LKFALCYGFRNLQNVV
Sbjct: 357  EGKTLLKFALCYGFRNLQNVV 377



 Score = 80.1 bits (196), Expect(2) = e-167
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = -2

Query: 785 KIGKCDYHFLEVMACPSGCLNGGGQIKPKEGQSVKDLLQSVE 660
           K GKCDYHFLE+MACPSGCLNGGGQIKPK GQS KDL++ +E
Sbjct: 381 KTGKCDYHFLEIMACPSGCLNGGGQIKPKPGQSPKDLIELLE 422


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