BLASTX nr result

ID: Cimicifuga21_contig00012028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012028
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631883.1| PREDICTED: uncharacterized protein LOC100854...    62   5e-08
ref|XP_002322439.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002514842.1| conserved hypothetical protein [Ricinus comm...    59   7e-07
ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp....    56   4e-06
ref|XP_002318251.1| predicted protein [Populus trichocarpa] gi|2...    56   5e-06

>ref|XP_003631883.1| PREDICTED: uncharacterized protein LOC100854667 [Vitis vinifera]
           gi|297735259|emb|CBI17621.3| unnamed protein product
           [Vitis vinifera]
          Length = 70

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = -2

Query: 475 RENNPGLKILWLWTIGTAGVLVASVMTSRMRDMEK 371
           RE +PGLKILWLWTIGTAG+LV SVM +R+RDME+
Sbjct: 3   RETSPGLKILWLWTIGTAGILVTSVMRTRLRDMEQ 37


>ref|XP_002322439.1| predicted protein [Populus trichocarpa] gi|222869435|gb|EEF06566.1|
           predicted protein [Populus trichocarpa]
          Length = 73

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 25/36 (69%), Positives = 33/36 (91%)
 Frame = -2

Query: 475 RENNPGLKILWLWTIGTAGVLVASVMTSRMRDMEKI 368
           RE +PGLKILWLWTIGTAG+LV SV+ +R++DME++
Sbjct: 3   RETSPGLKILWLWTIGTAGILVTSVVRTRLKDMEQM 38


>ref|XP_002514842.1| conserved hypothetical protein [Ricinus communis]
           gi|223545893|gb|EEF47396.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 73

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 24/35 (68%), Positives = 32/35 (91%)
 Frame = -2

Query: 472 ENNPGLKILWLWTIGTAGVLVASVMTSRMRDMEKI 368
           E +PGLKILWLWTIGTAG+LV SV+ +R++DME++
Sbjct: 4   EKSPGLKILWLWTIGTAGILVTSVVRTRLKDMEQL 38


>ref|XP_002889580.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335422|gb|EFH65839.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 79

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -2

Query: 475 RENNPGLKILWLWTIGTAGVLVASVMTSRMRDMEKI 368
           RE +PGLKILW+WTIGTA +LV SV+ +RM+DM+ +
Sbjct: 3   REKSPGLKILWIWTIGTAAILVTSVVRTRMQDMQSM 38


>ref|XP_002318251.1| predicted protein [Populus trichocarpa] gi|222858924|gb|EEE96471.1|
           predicted protein [Populus trichocarpa]
          Length = 75

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = -2

Query: 475 RENNPGLKILWLWTIGTAGVLVASVMTSRMRDMEKI 368
           RE +PGLKILW WTIGTA +LV SV+ +R++DME++
Sbjct: 3   RETSPGLKILWAWTIGTAAILVTSVVRTRLKDMEQM 38


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