BLASTX nr result

ID: Cimicifuga21_contig00012026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012026
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271328.1| PREDICTED: oligoribonuclease [Vitis vinifera...   319   8e-85
ref|XP_004142177.1| PREDICTED: oligoribonuclease-like [Cucumis s...   302   1e-79
ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|3...   295   2e-77
ref|XP_002330965.1| predicted protein [Populus trichocarpa] gi|2...   295   2e-77
ref|NP_001238542.1| uncharacterized protein LOC100527858 [Glycin...   294   3e-77

>ref|XP_002271328.1| PREDICTED: oligoribonuclease [Vitis vinifera]
            gi|296083947|emb|CBI24335.3| unnamed protein product
            [Vitis vinifera]
          Length = 245

 Score =  319 bits (818), Expect = 8e-85
 Identities = 158/242 (65%), Positives = 195/242 (80%)
 Frame = -1

Query: 1033 MDLLLNPFSLLDVDVEDDCQETLASDALAKDGKTRTKPDNGKQKGNKSEDIPVVKNEKHD 854
            M+ L N FS+L +D +DD            D  + T  D  ++KG  S ++   KNEK+ 
Sbjct: 1    MEKLSNIFSVLQLDADDD-------QLHMPDSSSTT--DKKEKKGKSSSNLVPSKNEKNC 51

Query: 853  QKDLPGTSEEYKMALVWIDLEMTGLDIQVDRILEIACVITDGNLIKSVEGPDLVIHQSKE 674
            ++D    SE+Y++ LVWIDLEMTGL+++VDRILEIAC+ITDGNLIKSVEGPDLVIHQ+KE
Sbjct: 52   EQDSMIPSEQYRLPLVWIDLEMTGLNVEVDRILEIACIITDGNLIKSVEGPDLVIHQTKE 111

Query: 673  CLDRMGEWCRDHHAASGLTKKALQSSISESNAEKQVLDFVIKHVGTQKPLLAGNSVYVDF 494
            CLD MGEWC+ HH+ASGLTKK L+S+ISE  AEKQV++FV ++VGT  PLLAGNSVY+DF
Sbjct: 112  CLDNMGEWCQSHHSASGLTKKVLRSTISEQEAEKQVIEFVKRNVGTYTPLLAGNSVYMDF 171

Query: 493  LFLKKYMPDLASLFPHVLVDVSSLKALCIRWYPKENRKAPSKKKNHRAMDDIKESIKELK 314
            LFLKKYMPDLASLF HVLVDVSS+KALCIRWYP++++KAPSK+  HRAMDDI+ESI+ELK
Sbjct: 172  LFLKKYMPDLASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAMDDIRESIRELK 231

Query: 313  YY 308
            YY
Sbjct: 232  YY 233


>ref|XP_004142177.1| PREDICTED: oligoribonuclease-like [Cucumis sativus]
            gi|449503429|ref|XP_004161998.1| PREDICTED:
            oligoribonuclease-like [Cucumis sativus]
          Length = 253

 Score =  302 bits (773), Expect = 1e-79
 Identities = 153/244 (62%), Positives = 185/244 (75%), Gaps = 1/244 (0%)
 Frame = -1

Query: 1036 AMDLLLNPFSLLDVDVEDDCQETLASDALAKDGKTRTKPD-NGKQKGNKSEDIPVVKNEK 860
            AM  L+N FSLL++D EDD    L++ +  KD  T + P   GK+K   +    ++  E+
Sbjct: 2    AMKPLVNAFSLLELDAEDDQIPALSTSS--KDDATVSYPSPTGKRKKEVNISGDILTGER 59

Query: 859  HDQKDLPGTSEEYKMALVWIDLEMTGLDIQVDRILEIACVITDGNLIKSVEGPDLVIHQS 680
              Q      +E+YK  LVWIDLEMTGL+++ DRILEIAC+IT+GNL K VEGPDLVIHQS
Sbjct: 60   QKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQS 119

Query: 679  KECLDRMGEWCRDHHAASGLTKKALQSSISESNAEKQVLDFVIKHVGTQKPLLAGNSVYV 500
            KECLD+MGEWC+ HHAASGLTKK L+S+ISE  AEKQV+ FV KHV T K  LAGNSVY+
Sbjct: 120  KECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYM 179

Query: 499  DFLFLKKYMPDLASLFPHVLVDVSSLKALCIRWYPKENRKAPSKKKNHRAMDDIKESIKE 320
            DF+FLKKYMPDLA LF HVLVDVSS+K LC RWYP++ +KAP K+  HRAMDDI+ESI E
Sbjct: 180  DFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIME 239

Query: 319  LKYY 308
            LKYY
Sbjct: 240  LKYY 243


>ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula] gi|355518478|gb|AET00102.1|
            Oligoribonuclease [Medicago truncatula]
          Length = 1551

 Score =  295 bits (754), Expect = 2e-77
 Identities = 146/245 (59%), Positives = 190/245 (77%), Gaps = 1/245 (0%)
 Frame = -1

Query: 1039 RAMDLLLNPFSLLDVDVEDDCQETLASDALAKDGKTRTKPDNGKQKGNKSEDIPVVKNEK 860
            R M+ L+N FS+L++D +D   + L+  +            +GK+   K+  + + K ++
Sbjct: 657  RKMENLVNSFSVLELDADDSTIQPLSLPS----------GSSGKKANGKALPVKIEKQDQ 706

Query: 859  HDQKDLPGTSEEYKMALVWIDLEMTGLDIQVDRILEIACVITDGNLIKSVEGPDLVIHQS 680
            H+    P  S+ Y++ LVWIDLEMTGL+I++DRILEIAC+ITDGNL KSVEGPDLVIHQ+
Sbjct: 707  HN----PYLSD-YRLPLVWIDLEMTGLNIELDRILEIACIITDGNLTKSVEGPDLVIHQT 761

Query: 679  KECLDRMGEWCRDHHAASGLTKKALQSSISESNAEKQVLDFVIKHV-GTQKPLLAGNSVY 503
            KECLD MGEWC+ HHAASGLTKK LQS+ISE  AE+QV++FV KHV GT KPLLAGNS+Y
Sbjct: 762  KECLDGMGEWCKSHHAASGLTKKVLQSTISEREAEEQVIEFVKKHVGGTYKPLLAGNSIY 821

Query: 502  VDFLFLKKYMPDLASLFPHVLVDVSSLKALCIRWYPKENRKAPSKKKNHRAMDDIKESIK 323
            VD  ++KKYMP+LA +F HV+VDVSS+ ALCIRWYPK+ +K P+K+K HRA+DDI+ESI+
Sbjct: 822  VDLQYMKKYMPELAGIFSHVVVDVSSISALCIRWYPKDQKKVPTKQKRHRALDDIRESIE 881

Query: 322  ELKYY 308
            ELKYY
Sbjct: 882  ELKYY 886


>ref|XP_002330965.1| predicted protein [Populus trichocarpa] gi|222872757|gb|EEF09888.1|
            predicted protein [Populus trichocarpa]
          Length = 219

 Score =  295 bits (754), Expect = 2e-77
 Identities = 151/242 (62%), Positives = 176/242 (72%)
 Frame = -1

Query: 1033 MDLLLNPFSLLDVDVEDDCQETLASDALAKDGKTRTKPDNGKQKGNKSEDIPVVKNEKHD 854
            M+LL N FSLL+VD EDD +  +AS + +K    R                         
Sbjct: 1    MNLLSNAFSLLEVDAEDD-RVNIASSSKSKSSNNR------------------------- 34

Query: 853  QKDLPGTSEEYKMALVWIDLEMTGLDIQVDRILEIACVITDGNLIKSVEGPDLVIHQSKE 674
                    E YKM LVWIDLEMTGL+ +VDRILEIAC+ITDG L KSVEGPDLVIHQSKE
Sbjct: 35   --------EVYKMPLVWIDLEMTGLNTEVDRILEIACIITDGYLTKSVEGPDLVIHQSKE 86

Query: 673  CLDRMGEWCRDHHAASGLTKKALQSSISESNAEKQVLDFVIKHVGTQKPLLAGNSVYVDF 494
            CLDRMGEWC+ HHAASGLT K L S I+E +AEKQV++FV +HVGT  PL+AGNSVYVDF
Sbjct: 87   CLDRMGEWCQSHHAASGLTNKVLGSKITERDAEKQVIEFVKRHVGTHTPLIAGNSVYVDF 146

Query: 493  LFLKKYMPDLASLFPHVLVDVSSLKALCIRWYPKENRKAPSKKKNHRAMDDIKESIKELK 314
            LFLKKYMPDLA LF HV+VDVSS+ ALC+RWYP++ RKAP K+  HRA+DDI+ESI+ELK
Sbjct: 147  LFLKKYMPDLAGLFSHVVVDVSSVMALCMRWYPQDRRKAPQKENKHRALDDIRESIRELK 206

Query: 313  YY 308
            YY
Sbjct: 207  YY 208


>ref|NP_001238542.1| uncharacterized protein LOC100527858 [Glycine max]
            gi|255633388|gb|ACU17051.1| unknown [Glycine max]
          Length = 242

 Score =  294 bits (753), Expect = 3e-77
 Identities = 150/244 (61%), Positives = 185/244 (75%), Gaps = 2/244 (0%)
 Frame = -1

Query: 1033 MDLLLNPFSLLDVDVEDDCQETLASDALAKDGKTRTKPDNGKQKGNKSEDIPVVKNEKHD 854
            M+ L N FS+L++D +D    T A              D   ++ N   DI  VK+EK  
Sbjct: 1    MEKLANSFSVLELDADDSHVPTTA--------------DISDKRVNADVDIVPVKSEKQS 46

Query: 853  QKDLPGTSEEYKMALVWIDLEMTGLDIQVDRILEIACVITDGNLIKSVEGPDLVIHQSKE 674
            Q++    S EYK+ LVWIDLEMTGL+I+VDRILEIAC+ITDGNL K+VE PDLVIHQ+KE
Sbjct: 47   QENPVTPSCEYKLPLVWIDLEMTGLNIEVDRILEIACIITDGNLTKTVESPDLVIHQTKE 106

Query: 673  CLDRMGEWCRDHHAASGLTKKALQSSISESNAEKQVLDFVIKH--VGTQKPLLAGNSVYV 500
            CLDRMGEWC+ HHAASGLTKK L+S+ISE  AE+QV++FV ++  VG+  P LAGNS+YV
Sbjct: 107  CLDRMGEWCQSHHAASGLTKKVLKSTISEGEAEEQVIEFVKRYVNVGSYTPHLAGNSIYV 166

Query: 499  DFLFLKKYMPDLASLFPHVLVDVSSLKALCIRWYPKENRKAPSKKKNHRAMDDIKESIKE 320
            DF FLKKYMP LASLF HVLVDVSS+KALCIRWYPK+ ++APSK   HRA+DDI+ESI+E
Sbjct: 167  DFQFLKKYMPKLASLFSHVLVDVSSVKALCIRWYPKDQKRAPSKLNRHRALDDIRESIEE 226

Query: 319  LKYY 308
            ++YY
Sbjct: 227  IRYY 230


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