BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012022
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]    78   7e-13
ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containi...    65   4e-09
dbj|BAJ91286.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07
ref|XP_003624492.1| Pentatricopeptide repeat-containing protein ...    55   5e-06

>emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
          Length = 667

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 41/71 (57%), Positives = 51/71 (71%)
 Frame = -3

Query: 215 MSRAQKFHASLIKTGGLQNHVYQCNLLLQAYIQSGNLSEAHKLLNQIPLANAVSHNTLLS 36
           M +A   HASL+K G L  HVYQCN+LLQAYI S  LS+AHKLL+ +P  + VS+NT+LS
Sbjct: 31  MYKAPVLHASLVKNG-LIAHVYQCNILLQAYINSQALSDAHKLLHFMPQPSVVSYNTILS 89

Query: 35  GYVKSNRIQEA 3
           GY K   + EA
Sbjct: 90  GYFKFGLVSEA 100


>ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Brachypodium distachyon]
          Length = 617

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 36/79 (45%), Positives = 53/79 (67%), Gaps = 5/79 (6%)
 Frame = -3

Query: 224 LSRMSRAQKFHASLIKTGGL--QNH---VYQCNLLLQAYIQSGNLSEAHKLLNQIPLANA 60
           ++ +  A+K HASL+K+GG+  Q H    Y+ NLLL+AY + G L++A  LL+ +P    
Sbjct: 1   MAPLLHARKLHASLLKSGGVSHQGHGGDTYRWNLLLRAYTRGGGLADARALLDLMPSPTL 60

Query: 59  VSHNTLLSGYVKSNRIQEA 3
           VS+NTLLSGY  S+ + EA
Sbjct: 61  VSYNTLLSGYAASSGLLEA 79


>dbj|BAJ91286.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 45/64 (70%)
 Frame = -3

Query: 209 RAQKFHASLIKTGGLQNHVYQCNLLLQAYIQSGNLSEAHKLLNQIPLANAVSHNTLLSGY 30
           +A+K HA+L+K+G      Y+CNL+L+AY + G L++A  LL+ +P    VS+NT+LSGY
Sbjct: 9   QARKLHATLLKSG-YHGDAYRCNLVLRAYARGGALADARGLLDLMPSPTLVSYNTVLSGY 67

Query: 29  VKSN 18
             S+
Sbjct: 68  ASSS 71


>ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 516

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = -3

Query: 224 LSRMSRAQKFHASLIKTG-GLQNHVYQCNLLLQAYIQSGNLSEAHKLLNQIPLANAVSHN 48
           LS     Q+ HA +IK G GL+  VY  N LL+ Y  SGN+  AH L NQ+P  + VS N
Sbjct: 123 LSAFEETQQIHAHIIKRGFGLE--VYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWN 180

Query: 47  TLLSGYVKSNRIQEA 3
            ++ GY+K   +  A
Sbjct: 181 IMIDGYIKFGNLDMA 195


>ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499507|gb|AES80710.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/63 (42%), Positives = 43/63 (68%)
 Frame = -3

Query: 191 ASLIKTGGLQNHVYQCNLLLQAYIQSGNLSEAHKLLNQIPLANAVSHNTLLSGYVKSNRI 12
           AS+IKTG   N  Y+ N L+++++Q G+L+ A KL +++P  N  S NT++ GY+KS  +
Sbjct: 90  ASIIKTGFNPN-TYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKSGNL 148

Query: 11  QEA 3
            EA
Sbjct: 149 SEA 151