BLASTX nr result

ID: Cimicifuga21_contig00012021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012021
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synth...    61   1e-07
ref|XP_002510624.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
gb|EEE61489.1| hypothetical protein OsJ_15774 [Oryza sativa Japo...    59   4e-07
ref|XP_002448324.1| hypothetical protein SORBIDRAFT_06g025270 [S...    58   9e-07
emb|CAH67165.1| H0211B05.2 [Oryza sativa Indica Group] gi|218195...    58   9e-07

>ref|XP_002284814.1| PREDICTED: putative tRNA pseudouridine synthase Pus10-like [Vitis
           vinifera]
          Length = 578

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/103 (34%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
 Frame = -1

Query: 297 DDSANVIAAAIRSLPPAHAVMDLLSMGVCVRCILRLFGICGRAXXXXXXXXXXXXSVLGK 118
           +D   ++  A+  + P HAV DLLS+G+C+ CI RL G+ G               V+G+
Sbjct: 33  EDDMRILNDAVSKVSP-HAVKDLLSLGICIGCIFRLSGVRGHIFSCPSLLLSILHPVIGE 91

Query: 117 -SKVSHEAKDGFKQQKDSNSCHPFQN---ESAFCSICLGILQF 1
            +  S     G    +DS + H  Q    E   CSICLG+LQF
Sbjct: 92  PTDSSTHRYTGIGGNEDSGAAHSSQESECEPVICSICLGVLQF 134


>ref|XP_002510624.1| conserved hypothetical protein [Ricinus communis]
           gi|223551325|gb|EEF52811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/103 (35%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
 Frame = -1

Query: 297 DDSANVIAAAIRSLPPAHAVMDLLSMGVCVRCILRLFGICGRAXXXXXXXXXXXXSVLGK 118
           D+   +   A+RSLP +HAV  LL  G+C+RCI RL G+ G              ++LG+
Sbjct: 32  DEDMRLFNEAVRSLP-SHAVKGLLRNGICMRCIFRLLGVQGHIFFTYPLSRSLMHNILGE 90

Query: 117 SKVSHEAKDGFKQQKDSNSCHPFQNESA----FCSICLGILQF 1
           S         +K  +D   C  + NES      C++CLGILQF
Sbjct: 91  S---------WKDDEDMKGCSTY-NESGVDQEICNVCLGILQF 123


>gb|EEE61489.1| hypothetical protein OsJ_15774 [Oryza sativa Japonica Group]
          Length = 536

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/89 (37%), Positives = 40/89 (44%)
 Frame = -1

Query: 273 AAIRSLPPAHAVMDLLSMGVCVRCILRLFGICGRAXXXXXXXXXXXXSVLGKSKVSHEAK 94
           AA  S PP HA+  LLS+GVCVRCI R FG    A                 + V H   
Sbjct: 18  AAASSFPPLHAIHHLLSVGVCVRCIFRFFGAFSYAAPCLSL----------TASVLHSFL 67

Query: 93  DGFKQQKDSNSCHPFQNESAFCSICLGIL 7
           +       S SC     + A+CSIC G+L
Sbjct: 68  EEHDDSAKSGSCSCLSKDEAYCSICFGVL 96


>ref|XP_002448324.1| hypothetical protein SORBIDRAFT_06g025270 [Sorghum bicolor]
           gi|241939507|gb|EES12652.1| hypothetical protein
           SORBIDRAFT_06g025270 [Sorghum bicolor]
          Length = 516

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/89 (38%), Positives = 41/89 (46%)
 Frame = -1

Query: 273 AAIRSLPPAHAVMDLLSMGVCVRCILRLFGICGRAXXXXXXXXXXXXSVLGKSKVSHEAK 94
           AA  S PP HAV  LLS+GVCVRCILRL G    A                 + V H   
Sbjct: 19  AAESSFPPLHAVHHLLSVGVCVRCILRLLGAYSSACSYASL----------TASVLHSFL 68

Query: 93  DGFKQQKDSNSCHPFQNESAFCSICLGIL 7
           +        +SC       A+CS+CLG+L
Sbjct: 69  EEHDDSMKGDSCPCLSMNDAYCSVCLGVL 97


>emb|CAH67165.1| H0211B05.2 [Oryza sativa Indica Group] gi|218195372|gb|EEC77799.1|
           hypothetical protein OsI_16978 [Oryza sativa Indica
           Group]
          Length = 536

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/89 (37%), Positives = 40/89 (44%)
 Frame = -1

Query: 273 AAIRSLPPAHAVMDLLSMGVCVRCILRLFGICGRAXXXXXXXXXXXXSVLGKSKVSHEAK 94
           AA  S PP HA+  LLS+GVCVRCI R FG    A                 + V H   
Sbjct: 18  AAASSFPPLHAIHHLLSVGVCVRCIFRFFGAFSYAAPCLSL----------TASVLHSFL 67

Query: 93  DGFKQQKDSNSCHPFQNESAFCSICLGIL 7
           +       S SC     + A+CSIC G+L
Sbjct: 68  EEHDDFAKSGSCSCLSKDEAYCSICFGVL 96


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