BLASTX nr result

ID: Cimicifuga21_contig00012010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012010
         (3593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135300.1| PREDICTED: 25.3 kDa heat shock protein, chlo...   184   2e-43
ref|XP_002515014.1| heat shock protein, putative [Ricinus commun...   182   7e-43
gb|ABO60880.1| chloroplast small heat shock protein [Epilobium a...   178   1e-41
ref|XP_002314566.1| predicted protein [Populus trichocarpa] gi|2...   177   1e-41
emb|CBI27533.3| unnamed protein product [Vitis vinifera]              172   6e-40

>ref|XP_004135300.1| PREDICTED: 25.3 kDa heat shock protein, chloroplastic-like [Cucumis
           sativus] gi|449512976|ref|XP_004164194.1| PREDICTED:
           25.3 kDa heat shock protein, chloroplastic-like [Cucumis
           sativus]
          Length = 232

 Score =  184 bits (467), Expect = 2e-43
 Identities = 102/188 (54%), Positives = 123/188 (65%), Gaps = 5/188 (2%)
 Frame = -3

Query: 771 RSYSNNNSIHAMVAADGRDNLDHLQRS---GRVXXXXXXXXXXXXXPIRLWDRFPNARTV 601
           + +   +S+ A V  DGR+NLDHLQR+    +              PI LWDRFP ARTV
Sbjct: 24  KKFVRKSSVKA-VRGDGRENLDHLQRTIEKEKQTAQPPKKRVAPVAPIGLWDRFPTARTV 82

Query: 600 Q*LMETMESLMEDPVGYNNTWSSSPLPRDDISGYRRGRTPWEIKEGEKEYKLRFDMTGMT 421
           Q +METME +M+DP  Y+  W S P   D  +GY RGRTPWEIKEGE EYK+RFDM GMT
Sbjct: 83  QQMMETMERIMDDPFAYSGAWPSPPFTSDG-AGYSRGRTPWEIKEGENEYKMRFDMPGMT 141

Query: 420 KNDVRVWVEEKMLXXXXXXXXXXXET--ENGVVEEVDREEWSSKSYGKYSSRIALPANVD 247
           K+DV+VWVEEKML           +   ENG VEE +  +WS+KSYG+YSSRIALP NV 
Sbjct: 142 KDDVKVWVEEKMLVVKAEKAEKVKKASEENGKVEE-EEGDWSAKSYGRYSSRIALPENVQ 200

Query: 246 FGKIKAEV 223
           F +IKAEV
Sbjct: 201 FEQIKAEV 208


>ref|XP_002515014.1| heat shock protein, putative [Ricinus communis]
           gi|223546065|gb|EEF47568.1| heat shock protein, putative
           [Ricinus communis]
          Length = 253

 Score =  182 bits (461), Expect = 7e-43
 Identities = 101/189 (53%), Positives = 119/189 (62%), Gaps = 11/189 (5%)
 Frame = -3

Query: 756 NNSIHAMVAADGRDNLDHLQRSG---RVXXXXXXXXXXXXXPIRLWDRFPNARTVQ*LME 586
           N+ I AM A++ RDNLDHLQR                    P+ LWDRFP ARTVQ +ME
Sbjct: 42  NSVIKAMAASESRDNLDHLQRVNGKQHQQQAQPKKRVARVAPVGLWDRFPTARTVQQMME 101

Query: 585 TMESLMEDPVGYNNTWSSSPLPRDDISGYRRGRTPWEIKEGEKEYKLRFDMTGMTKNDVR 406
           TME +M+DP  Y+++W +   P +  SGY RGRTPWEIKEGE EYK+RFDM GMTK DV+
Sbjct: 102 TMERMMDDPFTYSSSWPTPAAPIEG-SGYGRGRTPWEIKEGENEYKMRFDMPGMTKEDVK 160

Query: 405 VWVEEKMLXXXXXXXXXXXETE--NG------VVEEVDREEWSSKSYGKYSSRIALPANV 250
           VWVEEKML             E  NG         E + EEWS+KSYG+YSSRIALP N+
Sbjct: 161 VWVEEKMLVVKAEKLPKQKVNEERNGEDQKAKAEAEEEEEEWSAKSYGRYSSRIALPENI 220

Query: 249 DFGKIKAEV 223
            F KIKAEV
Sbjct: 221 QFEKIKAEV 229


>gb|ABO60880.1| chloroplast small heat shock protein [Epilobium amurense]
          Length = 236

 Score =  178 bits (451), Expect = 1e-41
 Identities = 99/193 (51%), Positives = 121/193 (62%), Gaps = 6/193 (3%)
 Frame = -3

Query: 783 RPMRRSYSNNNSIHAMVAADGRDNLDHLQRSGRVXXXXXXXXXXXXXPIR------LWDR 622
           R  +RS     SI AM A   RD+LDHLQR+ +               +       LWDR
Sbjct: 27  RSPQRSNVGFRSIRAM-AEGRRDSLDHLQRASQPQKQQQQPQLPPKRRVAAVAPIGLWDR 85

Query: 621 FPNARTVQ*LMETMESLMEDPVGYNNTWSSSPLPRDDISGYRRGRTPWEIKEGEKEYKLR 442
           FP ARTVQ +M+TM+ ++E+P  Y+  WSS  +P+ +  GY RGRTPWEIKEGE EYK+R
Sbjct: 86  FPTARTVQQMMDTMDRMIEEPFDYSGGWSSR-MPQSENGGYSRGRTPWEIKEGENEYKMR 144

Query: 441 FDMTGMTKNDVRVWVEEKMLXXXXXXXXXXXETENGVVEEVDREEWSSKSYGKYSSRIAL 262
           FDM GMTK DV+VWVEEKML             +NG  +E + EEWS+KSYGKYSSRIAL
Sbjct: 145 FDMPGMTKEDVKVWVEEKML-----VIKAEKVLKNGEEQEEEEEEWSAKSYGKYSSRIAL 199

Query: 261 PANVDFGKIKAEV 223
           P  V F KI+AEV
Sbjct: 200 PEKVQFEKIRAEV 212


>ref|XP_002314566.1| predicted protein [Populus trichocarpa] gi|222863606|gb|EEF00737.1|
           predicted protein [Populus trichocarpa]
          Length = 193

 Score =  177 bits (450), Expect = 1e-41
 Identities = 101/173 (58%), Positives = 117/173 (67%), Gaps = 2/173 (1%)
 Frame = -3

Query: 735 VAADGRDNLDHLQRSGR-VXXXXXXXXXXXXXPIRLWDRFPNARTVQ*LMETMESLMEDP 559
           +AA+ R+NLDHLQR+ +               PI LWDRFP ARTVQ +METME +MEDP
Sbjct: 1   MAAESRENLDHLQRARKNPQQSQHKKRVAPAAPIGLWDRFPTARTVQQMMETMERVMEDP 60

Query: 558 VGYNNTWSSSPLPRDDISGYRRGRTPWEIKEGEKEYKLRFDMTGMTKNDVRVWVEEKMLX 379
             Y+  W S PLP +  SGY RGRTPWEIKEGE EYK+RFDM GMTK DV+VWVEEKML 
Sbjct: 61  FVYSGRWPS-PLPVEG-SGYSRGRTPWEIKEGEDEYKMRFDMPGMTKEDVKVWVEEKML- 117

Query: 378 XXXXXXXXXXETENGVVE-EVDREEWSSKSYGKYSSRIALPANVDFGKIKAEV 223
                     +T NGV   E +  EWS+KSYG+YSSRIALP N+ F KI AEV
Sbjct: 118 -VVKAEKVPQKTVNGVENGEEEEGEWSAKSYGRYSSRIALPENIQFEKITAEV 169


>emb|CBI27533.3| unnamed protein product [Vitis vinifera]
          Length = 182

 Score =  172 bits (436), Expect = 6e-40
 Identities = 94/171 (54%), Positives = 112/171 (65%)
 Frame = -3

Query: 735 VAADGRDNLDHLQRSGRVXXXXXXXXXXXXXPIRLWDRFPNARTVQ*LMETMESLMEDPV 556
           +A +GRDNLDHL+R+G+              PI LWDRFP ARTVQ +METME +MEDP+
Sbjct: 1   MATEGRDNLDHLRRAGK--HNPQKKRAPQVAPIGLWDRFPTARTVQQMMETMERMMEDPL 58

Query: 555 GYNNTWSSSPLPRDDISGYRRGRTPWEIKEGEKEYKLRFDMTGMTKNDVRVWVEEKMLXX 376
            Y+  W S      +  GY RGRTPWEIKE E EYK+RFDM GMTK+DV++WVEEKML  
Sbjct: 59  AYSGGWPS------ESGGYSRGRTPWEIKEDEGEYKIRFDMPGMTKDDVKLWVEEKMLVI 112

Query: 375 XXXXXXXXXETENGVVEEVDREEWSSKSYGKYSSRIALPANVDFGKIKAEV 223
                       NG   E D   WS+KSYG+Y+SR+ALP NV F KIKAEV
Sbjct: 113 KAEKMSGTEG--NG---EEDEGAWSAKSYGRYNSRVALPENVQFEKIKAEV 158


Top