BLASTX nr result

ID: Cimicifuga21_contig00012003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00012003
         (2174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267...   282   3e-73
ref|XP_002528710.1| DNA binding protein, putative [Ricinus commu...   255   4e-65
ref|XP_003534630.1| PREDICTED: uncharacterized protein LOC100802...   247   8e-63
ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797...   245   3e-62
ref|XP_004170022.1| PREDICTED: uncharacterized protein LOC101225...   242   3e-61

>ref|XP_002266425.1| PREDICTED: uncharacterized protein LOC100267210 [Vitis vinifera]
            gi|147841364|emb|CAN71240.1| hypothetical protein
            VITISV_034160 [Vitis vinifera]
            gi|296085846|emb|CBI31170.3| unnamed protein product
            [Vitis vinifera]
          Length = 570

 Score =  282 bits (721), Expect = 3e-73
 Identities = 156/290 (53%), Positives = 187/290 (64%), Gaps = 4/290 (1%)
 Frame = -2

Query: 1177 STGRVLPNGRNSAPVXXXXXXXXXXXXXXXXXXXSNFPLDTPPNLRTTMPDRPVSAGRSR 998
            ST R + NGRN AP                     +FPLDTPPNLRTT+PDRP+SAGRSR
Sbjct: 284  STARAMSNGRNPAPASRPSSPSPRVRNPPQPIVLPDFPLDTPPNLRTTLPDRPLSAGRSR 343

Query: 997  PTPSASVRANSDPGLTIPPRRQSSSPIVTRGRLPDL-VKGRSHSNGHNINTMEGQKTPPL 821
            P  + +++ NS+      P R+ SSPIVTRGR+ +   +GR HSNGH  ++ E +K   +
Sbjct: 344  PGAAMTMKGNSET-----PTRRQSSPIVTRGRVSEPNARGRLHSNGHVADSPESRKASHV 398

Query: 820  MDPTTRRLAKSAASMESTGFGRTISKKSLDMALRHMDIRNGSGGIRSSPGTALFPQSIRP 641
             +P+ + +  S  S ESTGFGRTISKKSLDMA+RHMDIRNG+G IR   GT LFPQSIR 
Sbjct: 399  TEPSRKPVKTSTTSSESTGFGRTISKKSLDMAIRHMDIRNGTGSIRPLSGTTLFPQSIRS 458

Query: 640  GIGKGHSAR---VSDIPVAVSSNGGTATINNISKLDNGHYNYRPHDGDLEPDIGHFSARL 470
               K  SAR    S  P +V+SNG     NN    +NG+Y  RP +   E D G FSA+L
Sbjct: 459  AASKTQSARASSASSAPASVNSNGSLPASNNGVPSENGNYFTRPSENGAEEDDGRFSAKL 518

Query: 469  GGMDIYESSRYDAILLKEDSKNTNWLLSADDKSDQGFMFDHRFESLPEPF 320
               DIYESSRYDAILLKED KNTNWL S  DKSDQG +FD+ FE LPEPF
Sbjct: 519  NQTDIYESSRYDAILLKEDLKNTNWLHSV-DKSDQGPIFDNGFEQLPEPF 567



 Score =  130 bits (326), Expect = 2e-27
 Identities = 68/109 (62%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = -2

Query: 1945 PRDTDENLDLFSRNRRTLSLTSTDESDVSMKLGRVSIGSVKLSRSGMDDLLSSVDGGKND 1766
            PRD DENLDLFSRNRRTLS+ S++ES+V +KLGR+S+GS KL+RSGMDDLLSSV+GGK+D
Sbjct: 31   PRDADENLDLFSRNRRTLSVVSSEESEVPLKLGRLSVGSAKLARSGMDDLLSSVEGGKHD 90

Query: 1765 YDWLLTPPGTPLL--SDASEPQQNFAPXXXXXXXXXXXXXXXSRLSVTQ 1625
            YDWLLTPPGTPL   SD +E Q                    SRLSV Q
Sbjct: 91   YDWLLTPPGTPLFPSSDGNESQPTMLAPRNSNLARSASTTKASRLSVAQ 139


>ref|XP_002528710.1| DNA binding protein, putative [Ricinus communis]
            gi|223531882|gb|EEF33699.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 580

 Score =  255 bits (651), Expect = 4e-65
 Identities = 151/292 (51%), Positives = 187/292 (64%), Gaps = 3/292 (1%)
 Frame = -2

Query: 1177 STGRVLPNGRNSAPVXXXXXXXXXXXXXXXXXXXSNFPLDTPPNLRTTMPDRPVSAGRSR 998
            S GRV  NGR SAP                     +FPLDTPPNLRTT+PDRP+SAGRSR
Sbjct: 301  SAGRVPSNGRISAPASRPSSPGPRIRPSQQPVVPPDFPLDTPPNLRTTLPDRPISAGRSR 360

Query: 997  PTPSASVRANSDP-GLTIPPRRQSSSPIVTRGRLPDLV-KGRSHSNGHNINTMEGQKTPP 824
            P  S +++ + +  G T  PRR SS PIV+RGRL +   KGR+HSNGH  +  E +K   
Sbjct: 361  PGASTTIKGSPETTGATNVPRRHSS-PIVSRGRLAEAPGKGRAHSNGHAADISEPRKVSH 419

Query: 823  LMDPTTRRLAKSAASM-ESTGFGRTISKKSLDMALRHMDIRNGSGGIRSSPGTALFPQSI 647
            + DP  R+  KS+ +  ++ GFGRTISKKSLDMA+RHMDIR G+G  R+   T LFPQSI
Sbjct: 420  VSDPGMRKPVKSSVTTTDNNGFGRTISKKSLDMAIRHMDIRTGNGSTRALSSTTLFPQSI 479

Query: 646  RPGIGKGHSARVSDIPVAVSSNGGTATINNISKLDNGHYNYRPHDGDLEPDIGHFSARLG 467
            R    K  S R  + P + ++NGG         L+NGH+  RP +   E + G +SA+L 
Sbjct: 480  RTAT-KAQSVRPMNAPES-NNNGGI--------LENGHHVSRPVEYGSEVNDGRYSAKLS 529

Query: 466  GMDIYESSRYDAILLKEDSKNTNWLLSADDKSDQGFMFDHRFESLPEPFDPL 311
             +DIYESSRYDA+LLKED KNTNWL S DDKSDQG +FD+ FE LPEPF  L
Sbjct: 530  EVDIYESSRYDALLLKEDLKNTNWLHSIDDKSDQGSIFDNGFE-LPEPFTSL 580



 Score =  122 bits (305), Expect = 5e-25
 Identities = 66/107 (61%), Positives = 78/107 (72%), Gaps = 3/107 (2%)
 Frame = -2

Query: 1936 TDENLDLFSRNRRTLSLTSTDES-DVSMKLGRVSIGSVKLSRSGMDDLLSSVDGGKNDYD 1760
            TDENLDLFS+NRR+LS+ S+DES DVSMKLGRVS+GS K+++SG+DDLLSS DGGK+DYD
Sbjct: 49   TDENLDLFSKNRRSLSVASSDESSDVSMKLGRVSVGSAKVAKSGIDDLLSSTDGGKHDYD 108

Query: 1759 WLLTPPGTPLL--SDASEPQQNFAPXXXXXXXXXXXXXXXSRLSVTQ 1625
            WLLTPPGTPL   SD S+ Q                    SRLSV+Q
Sbjct: 109  WLLTPPGTPLFPTSDGSDSQPTLVAPRSRSLSRSVSTTKASRLSVSQ 155


>ref|XP_003534630.1| PREDICTED: uncharacterized protein LOC100802172 [Glycine max]
          Length = 586

 Score =  247 bits (631), Expect = 8e-63
 Identities = 145/292 (49%), Positives = 181/292 (61%), Gaps = 6/292 (2%)
 Frame = -2

Query: 1177 STGRVLPNGRNSAPVXXXXXXXXXXXXXXXXXXXSNFPLDTPPNLRTTMPDRPVSAGRSR 998
            S GRV  NGRNSAP                     +FPL+TPPNLRTT+PDRPVSAGRSR
Sbjct: 296  SAGRVSSNGRNSAPASRPSSPSPRVRPPPQPIVPPDFPLETPPNLRTTLPDRPVSAGRSR 355

Query: 997  PTPSASVRANSDPGLTIP---PRRQSSSPIVTRGRLPD-LVKGRSHSNGHNINTMEGQKT 830
            P    +++ NS      P   PRR SS PIV+RGR+ +   K R +SNGH+++  E +K 
Sbjct: 356  PG-GVTMKTNSSETQASPVTMPRRHSS-PIVSRGRVTEPAAKTRGYSNGHHVDAPEPRKV 413

Query: 829  PPLMDPTTRRLAKSAASM-ESTGFGRTISKKSLDMALRHMDIRNGSGGIRSSPGTALFPQ 653
                +   R+  +S+++  ++TGFGRTISKKSLDMA++HMDIRN SG IRS   T LFPQ
Sbjct: 414  SHAPEVAARKSVRSSSTAPDNTGFGRTISKKSLDMAIKHMDIRNSSGNIRSLTSTTLFPQ 473

Query: 652  SIRPGIGKGHSARVSDIPVAVSSNGGTATINNISKLDNGH-YNYRPHDGDLEPDIGHFSA 476
            SIR    K H  RVS  P +V  NG   +  N +  D G+  +        + D  H+SA
Sbjct: 474  SIRTSTTKSH--RVSSAPASVDMNGSMISSKNGANFDVGNGIDRNMMMKGRDADERHYSA 531

Query: 475  RLGGMDIYESSRYDAILLKEDSKNTNWLLSADDKSDQGFMFDHRFESLPEPF 320
            +L  +DIYESSRYDA+L KED KNTNWL  ADDK DQG +FD+ FE LPEPF
Sbjct: 532  KLSEVDIYESSRYDALLFKEDLKNTNWLHGADDKCDQGPIFDNGFEHLPEPF 583



 Score =  109 bits (273), Expect = 3e-21
 Identities = 54/83 (65%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
 Frame = -2

Query: 1933 DENLDLFSRNRRTLSL--TSTDESDVSMKLGRVSIGSVKLSRSGMDDLLSSVDGGKNDYD 1760
            D+NLDLFS NRR+LSL  +S D SDVS+KLGR+SIG+ K  +SG+DDLLSS +GGK+DYD
Sbjct: 35   DDNLDLFSNNRRSLSLAASSDDSSDVSVKLGRLSIGTAKPVKSGIDDLLSSTEGGKHDYD 94

Query: 1759 WLLTPPGTPLLSDASEPQQNFAP 1691
            WLLTPPGTP+     E Q   AP
Sbjct: 95   WLLTPPGTPVFPSEGESQTTLAP 117


>ref|XP_003551619.1| PREDICTED: uncharacterized protein LOC100797203 [Glycine max]
          Length = 698

 Score =  245 bits (626), Expect = 3e-62
 Identities = 145/301 (48%), Positives = 181/301 (60%), Gaps = 6/301 (1%)
 Frame = -2

Query: 1204 PQLVTSHPASTGRVLPNGRNSAPVXXXXXXXXXXXXXXXXXXXSNFPLDTPPNLRTTMPD 1025
            P   T    S GRV  NGR+SAP                     +FPL+TPPNLRTT+PD
Sbjct: 399  PSPTTGSLTSAGRVSSNGRSSAPASRPSSPSPRVRPPPQPIVPPDFPLETPPNLRTTLPD 458

Query: 1024 RPVSAGRSRP---TPSASVRANSDPGLTIPPRRQSSSPIVTRGRLPD-LVKGRSHSNGHN 857
            RPVSAGRSRP   T  A+V       +T+P  R+ SSPIV+RGR+ +   K R +SNGH+
Sbjct: 459  RPVSAGRSRPGGVTMKANVSETQASPVTMP--RRHSSPIVSRGRVTEPAAKTRGYSNGHH 516

Query: 856  INTMEGQKTPPLMDPTTRRLAKSAASM-ESTGFGRTISKKSLDMALRHMDIRNGSGGIRS 680
             +  E +K     +   R+  +S+ +  ++TGFGRTISKKSLDMA++HMDIRN SG IRS
Sbjct: 517  ADASEPRKVSHAPEVAARKSIRSSTTAPDNTGFGRTISKKSLDMAIKHMDIRNSSGNIRS 576

Query: 679  SPGTALFPQSIRPGIGKGHSARVSDIPVAVSSNGGTATINNISKLDNGH-YNYRPHDGDL 503
               T LFPQSIR    K H  RVS  P +V  NG   +  N +  D G+  +        
Sbjct: 577  LSSTTLFPQSIRTSTSKSH--RVSSAPASVDMNGSMISSKNGANFDVGNGIDRNMMMKGR 634

Query: 502  EPDIGHFSARLGGMDIYESSRYDAILLKEDSKNTNWLLSADDKSDQGFMFDHRFESLPEP 323
            + D   +SA+L  +DIYESSRYDA+L KED KNTNWL  ADDK DQG +FD+ FE LPEP
Sbjct: 635  DADERQYSAKLSEVDIYESSRYDALLFKEDLKNTNWLHGADDKCDQGPIFDNGFEHLPEP 694

Query: 322  F 320
            F
Sbjct: 695  F 695



 Score =  108 bits (270), Expect = 6e-21
 Identities = 53/83 (63%), Positives = 65/83 (78%), Gaps = 2/83 (2%)
 Frame = -2

Query: 1933 DENLDLFSRNRRTLSL--TSTDESDVSMKLGRVSIGSVKLSRSGMDDLLSSVDGGKNDYD 1760
            D+NLDLFS NRR+L+L  +S D SDVS+KLGR+S+G+ K  RSG+DDLLSS +GGK+DYD
Sbjct: 148  DDNLDLFSDNRRSLALAASSDDSSDVSVKLGRLSVGTAKPVRSGIDDLLSSTEGGKHDYD 207

Query: 1759 WLLTPPGTPLLSDASEPQQNFAP 1691
            WLLTPPGTP+     E Q   AP
Sbjct: 208  WLLTPPGTPVFPSEGESQTTLAP 230


>ref|XP_004170022.1| PREDICTED: uncharacterized protein LOC101225804, partial [Cucumis
            sativus]
          Length = 484

 Score =  242 bits (617), Expect = 3e-61
 Identities = 142/300 (47%), Positives = 187/300 (62%), Gaps = 8/300 (2%)
 Frame = -2

Query: 1195 VTSHPASTGRVLP-NGRNSAPVXXXXXXXXXXXXXXXXXXXSNFPLDTPPNLRTTMPDRP 1019
            V   P+ST RVL  NGR+S                       +FPLDTPPNLRTT+PDRP
Sbjct: 187  VVGTPSSTSRVLSTNGRSSTSTSRPSSPSPRVRAAPQPIVPPDFPLDTPPNLRTTLPDRP 246

Query: 1018 VSAGRSRPTPSASVRANSDPGLTIPPRRQSSSPIVTRGRLPDLV-KGRSHSNGHNINTME 842
            +SAGRSRPTP++SVR + +   T    R+++SP +TRGR+ D   +GR ++NGH  ++ E
Sbjct: 247  ISAGRSRPTPASSVRGSPETTSTGTVPRRAASPTITRGRITDAPGRGRLNTNGHLSDSPE 306

Query: 841  GQKTPPLMDPTTRRLAK-SAASMESTGFGRTISKKSLDMALRHMDIRNGSGGIRSSPGTA 665
             ++     D + RR  K S  + ES GFGR+ISKKSLDMA+RHMDIRNG G +RS  G  
Sbjct: 307  TRRLSSSSDLSGRRPVKASTTTAESNGFGRSISKKSLDMAIRHMDIRNGPGSVRSGSGNT 366

Query: 664  LFPQSIRPGIGKGHSARVSDIPVAVSSNGGTATINNISKLDNGHYNYRPHDGDLEPDIG- 488
            LFP SIR    K  S  +S+   A+ ++   ++ NN   +D G++ +RP    +  ++G 
Sbjct: 367  LFPHSIRSATSKTQSIALSNSE-AIDTDYQMSSNNN---MDRGNHFHRP-SATIGTEVGG 421

Query: 487  ----HFSARLGGMDIYESSRYDAILLKEDSKNTNWLLSADDKSDQGFMFDHRFESLPEPF 320
                 FSA L  +DIYESSRYDAILLKED KNTNWL S DDK+D   + D+ FE+LPEPF
Sbjct: 422  GENGRFSASLNHLDIYESSRYDAILLKEDLKNTNWLHSTDDKTDLASILDNGFEALPEPF 481


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