BLASTX nr result
ID: Cimicifuga21_contig00012000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00012000
(1908 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf... 358 e-170
ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|2... 351 e-153
emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera] 286 e-150
ref|XP_002521716.1| protein with unknown function [Ricinus commu... 337 e-149
ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransf... 298 e-138
>ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A 2-like
[Vitis vinifera] gi|296088658|emb|CBI37649.3| unnamed
protein product [Vitis vinifera]
Length = 556
Score = 358 bits (919), Expect(2) = e-170
Identities = 182/312 (58%), Positives = 236/312 (75%), Gaps = 5/312 (1%)
Frame = +1
Query: 790 IILYAIAMADYDQESLELCKNLVKTKDAIESLALYHSSIGRFTNALGALIYPIYGQGELP 969
+ILYAIAMADYDQ+S+E+CK+++ TK I+ LALYHSS+GRF NALGALIYPIYGQGEL
Sbjct: 239 MILYAIAMADYDQDSIEVCKDVLDTKIGIDRLALYHSSVGRFPNALGALIYPIYGQGELT 298
Query: 970 QAFCRCAAVKGSLYVLRMPVRAMLFDKESRHYNGLRLASGQEVFSSQLVMGPSFIVPLP- 1146
QAFCR AAVKG +YVLRMPV A+L +KES H G+RLASGQ++FS +L++ PSFIVP+P
Sbjct: 299 QAFCRRAAVKGCIYVLRMPVIALLMEKESGHCKGVRLASGQDIFSQKLLVDPSFIVPVPV 358
Query: 1147 SPVQ-DLQQEKSDGSIVKDIKGQVARAVCITRGSIMSGLSNLLVIFPPRSLYPEQMTSVR 1323
+P Q D E S + D K +VAR +CI + S+ +SN + ++PPRSLYPEQ ++R
Sbjct: 359 APSQPDCMPESSQVINLVDAKQKVARGICIMKSSLKPDVSNFVFVYPPRSLYPEQAMAIR 418
Query: 1324 ALQLSSNLAVCPSGLFVLYLSALCDDDAQGKESLHAAIKALLTCSTS---DKIASIEKES 1494
A+Q+ SNL VCPSG+FVLYLS LC+D QGKE L AAIK+L T S + +S+ E+
Sbjct: 419 AVQIGSNLGVCPSGMFVLYLSTLCNDATQGKELLQAAIKSLFTLPVSGNPENSSSVHSEN 478
Query: 1495 VEEATPTLLWSAMYIQQLTKISSDDAISLCSMPDGKLDYRDILESTEKLFHKMYPDQEFM 1674
+EE PTLLWSA+Y Q+L + S ++IS SMPDG L+Y +L++T KLFH+MYP +EF
Sbjct: 479 MEEVKPTLLWSALYTQELV-MGSFESISSTSMPDGNLNYNVLLDATVKLFHQMYPQEEFF 537
Query: 1675 PEAKDPEDVADE 1710
PE PE+V D+
Sbjct: 538 PETTSPENVEDD 549
Score = 268 bits (684), Expect(2) = e-170
Identities = 142/234 (60%), Positives = 172/234 (73%), Gaps = 1/234 (0%)
Frame = +3
Query: 60 SFPCIEPSHFDLIVLGTGLPESVIAAASSANGKSVLHLDPNSFYGXXXXXXXXXXXXXXX 239
S+P IEP+ FDLIV+GTGLP+SVIAAA+S+ GKSVLHLD NSFYG
Sbjct: 6 SYPPIEPTDFDLIVVGTGLPQSVIAAAASSAGKSVLHLDSNSFYGSHFSSLNLDEFSSFL 65
Query: 240 XXQQATEQHSHPVTSSSFGDGTTDYVAVDLKSQCLYSDIEISHGSSEDFGPSRKFSLDLS 419
Q A SHP SS +YVA+DLK++ +YSD+EI+ SS+ SRKF+LD+S
Sbjct: 66 TSQSAVHS-SHPNPPSSVAADAAEYVALDLKTRPMYSDVEITSHSSDPVEHSRKFNLDVS 124
Query: 420 GPRVLFCADSTVNLMLKSGASHHVEFKSIDASFIYSDDGRFSTVPDSRSAIFKDRSLGLI 599
GPRVLFCAD+ V+LMLKSGAS ++EFKSIDASF+ DGRFSTVPDSR+AIFKDRSL L
Sbjct: 125 GPRVLFCADAAVDLMLKSGASQYLEFKSIDASFVCDADGRFSTVPDSRAAIFKDRSLSLT 184
Query: 600 EKNKLMRFFKLVQEHIEFKSTAQEESRT-ISNEDLESPFIDFLTKQRLPPKIKS 758
EKN+LMRFFKL+Q H+ A+ +S IS +DLESPF++FL K RLPPKIKS
Sbjct: 185 EKNQLMRFFKLIQGHLAASDEAENDSNARISEDDLESPFVEFLNKMRLPPKIKS 238
>ref|XP_002332635.1| predicted protein [Populus trichocarpa] gi|222832862|gb|EEE71339.1|
predicted protein [Populus trichocarpa]
Length = 553
Score = 351 bits (901), Expect(2) = e-153
Identities = 177/312 (56%), Positives = 236/312 (75%), Gaps = 4/312 (1%)
Frame = +1
Query: 790 IILYAIAMADYDQESLELCKNLVKTKDAIESLALYHSSIGRFTNALGALIYPIYGQGELP 969
IILYAIAMADYDQ+ + +C+NL+KTKD I+ LALY SS+GRFTNA GALIYPIYGQGELP
Sbjct: 238 IILYAIAMADYDQDDMGVCQNLLKTKDGIDRLALYQSSVGRFTNASGALIYPIYGQGELP 297
Query: 970 QAFCRCAAVKGSLYVLRMPVRAMLFDKESRHYNGLRLASGQEVFSSQLVMGPSFIVPLPS 1149
QAF R +AVKG ++VLRMPV A+L +K+S Y G+RLASGQ++FS +LV+ PSF + PS
Sbjct: 298 QAFSRRSAVKGCIHVLRMPVTALLMEKDSGSYKGVRLASGQDIFSQKLVLDPSFTLASPS 357
Query: 1150 -PVQDLQQEKSDGSIVKDIKGQVARAVCITRGSIMSGLSNLLVIFPPRSLYPEQMTSVRA 1326
DL E + +D+KG+VAR +CITR S+ +SNLLV++PPRSLYPEQ+TS+RA
Sbjct: 358 ASPSDLLHESFNFLSTRDVKGKVARGICITRNSLKPDMSNLLVVYPPRSLYPEQITSIRA 417
Query: 1327 LQLSSNLAVCPSGLFVLYLSALCDDDAQGKESLHAAIKALLTCS---TSDKIASIEKESV 1497
LQ+S NLAVCP G+FVLYLSALCDD QGK L+AA+ ALLT S+ ++++ E+
Sbjct: 418 LQISGNLAVCPLGMFVLYLSALCDDAIQGKRLLNAAMNALLTFPDPVNSESSSTVQSETT 477
Query: 1498 EEATPTLLWSAMYIQQLTKISSDDAISLCSMPDGKLDYRDILESTEKLFHKMYPDQEFMP 1677
EE P+++WS +Y+Q+++ D+I+ MPDG L+Y DIL++ KLF +MYP++E P
Sbjct: 478 EE-KPSVIWSGLYMQEMS-TGQFDSINFAPMPDGNLNYNDILDAALKLFQEMYPNEENFP 535
Query: 1678 EAKDPEDVADEV 1713
E PE+ D++
Sbjct: 536 ETTPPENSEDDI 547
Score = 218 bits (555), Expect(2) = e-153
Identities = 123/240 (51%), Positives = 162/240 (67%), Gaps = 2/240 (0%)
Frame = +3
Query: 45 MADEFSFPCIEPSHFDLIVLGTGLPESVIAAASSANGKSVLHLDPNSFYGXXXXXXXXXX 224
M++ +P IEP+ FDLI +GTGL E ++AAA+SA+GK+VLHLD N FYG
Sbjct: 1 MSEPPPYPQIEPTTFDLIAVGTGLAECIVAAAASASGKTVLHLDTNPFYGSHYSSLSVPE 60
Query: 225 XXXXXXXQQATEQHSHPVTSSSFGDGTTDYVAVDLKSQCLYSDIEISHGSSEDFGPS-RK 401
S P +S+S DY V+L +Q +YSD+EIS E + RK
Sbjct: 61 LTSFLISNSTA---SSPPSSTSTTTDIPDYSIVNLITQPVYSDVEISCFYPELIEENLRK 117
Query: 402 FSLDLSGPRVLFCADSTVNLMLKSGASHHVEFKSIDASFIYSDDGRFSTVPDSRSAIFKD 581
F+LDL GPRVLFCAD +++LMLKSGAS++VEFKSIDASF+ +G+ VPDSR+AIFKD
Sbjct: 118 FNLDLCGPRVLFCADKSIDLMLKSGASNYVEFKSIDASFVGDGNGKLWNVPDSRAAIFKD 177
Query: 582 RSLGLIEKNKLMRFFKLVQEHIEFKSTAQEESR-TISNEDLESPFIDFLTKQRLPPKIKS 758
+SL L+EKN+LMRFFKLVQ H+ A + IS+EDL+ PF+++L+K RLPPKI+S
Sbjct: 178 KSLTLMEKNQLMRFFKLVQGHLVATVGAGTSGKMKISDEDLQRPFVEYLSKMRLPPKIRS 237
>emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera]
Length = 812
Score = 286 bits (732), Expect(2) = e-150
Identities = 161/322 (50%), Positives = 208/322 (64%), Gaps = 46/322 (14%)
Frame = +1
Query: 790 IILYAIAMADYDQESLELCKNLVKTKDAIESLALYHSSIG-------------------- 909
+ILYAIAMADYDQ+S+E+CK+++ TK I+ LALYHSS+G
Sbjct: 271 MILYAIAMADYDQDSIEVCKDVLDTKIGIDRLALYHSSVGSQGRRQVCVDVGFDXGGFFG 330
Query: 910 --------------RFTNALGALIYPIYGQGELPQAFCRCAAVKGSLYVLRMPVRAMLFD 1047
+F NALGALIYPIYGQGEL QAFCR AAVKG +YVLRMPV A+L +
Sbjct: 331 LIFKVHLYKSQNIRKFPNALGALIYPIYGQGELTQAFCRRAAVKGCIYVLRMPVIALLME 390
Query: 1048 KESRHYNGLRLASGQEVFSSQLVMGPSFIVPLP-SPVQ-DLQQEKSDGSIVKDIKGQVAR 1221
KES H G+RLASGQ++FS +L++ PSFIVP+P +P Q D E S + K +VAR
Sbjct: 391 KESGHCKGVRLASGQDIFSQKLLVDPSFIVPVPVAPSQPDCMPESSQVINLVYAKQKVAR 450
Query: 1222 AVCITRGSIMSGLSNLLVIFPPRSLYPEQMTSVRALQLSSNLAVCPSGLFVLYLSALCDD 1401
+CI + S+ +SN + ++PPRSLYPEQ ++RA+Q+ SNL VCPSG+FVLYLS LC+D
Sbjct: 451 GICIMKSSLKPDVSNFVFVYPPRSLYPEQAMAIRAVQIGSNLGVCPSGMFVLYLSTLCND 510
Query: 1402 DAQGKESLHAAIKALLTCSTS---DKIASIEKESVEEATPTLLWSAMYIQQLTKI--SSD 1566
QGKE L AAIK+L T S + +S+ E++EE PTLLWSA+Y Q+L +
Sbjct: 511 ATQGKELLQAAIKSLFTLPVSGNPENSSSVHSENMEEVKPTLLWSALYTQELVMLWWEVP 570
Query: 1567 DAISL-----CSMPDGKLDYRD 1617
SL CS G+L+ RD
Sbjct: 571 PCFSLVVPRSCSNEHGELEVRD 592
Score = 273 bits (699), Expect(2) = e-150
Identities = 145/238 (60%), Positives = 175/238 (73%), Gaps = 1/238 (0%)
Frame = +3
Query: 60 SFPCIEPSHFDLIVLGTGLPESVIAAASSANGKSVLHLDPNSFYGXXXXXXXXXXXXXXX 239
S+P IEP+ FDLIV+GTGLP+SVIAAA+S+ GKSVLHLD NSFYG
Sbjct: 6 SYPPIEPTDFDLIVVGTGLPQSVIAAAASSAGKSVLHLDSNSFYGSHFSSLNLDEFSSFL 65
Query: 240 XXQQATEQHSHPVTSSSFGDGTTDYVAVDLKSQCLYSDIEISHGSSEDFGPSRKFSLDLS 419
Q A SHP SS +YVA+DLK++ +YSD+EI+ SS+ SRKF+LD+S
Sbjct: 66 TSQSAVYS-SHPNPPSSVTADAAEYVALDLKTRPMYSDVEITSHSSDPLEHSRKFNLDVS 124
Query: 420 GPRVLFCADSTVNLMLKSGASHHVEFKSIDASFIYSDDGRFSTVPDSRSAIFKDRSLGLI 599
GPRVLFCAD+ V+LMLKSGAS ++EFKSIDASF+ DGRFSTVPDSR+AIFKDRSL L
Sbjct: 125 GPRVLFCADAAVDLMLKSGASQYLEFKSIDASFVCDADGRFSTVPDSRAAIFKDRSLSLT 184
Query: 600 EKNKLMRFFKLVQEHIEFKSTAQEESRT-ISNEDLESPFIDFLTKQRLPPKIKSYSSH 770
EKN+LMRFFKL+Q H+ A+ +S IS +DLESPF++FL K RLPPKIKSY SH
Sbjct: 185 EKNQLMRFFKLIQGHLAASDEAENDSNARISEDDLESPFVEFLNKMRLPPKIKSYRSH 242
>ref|XP_002521716.1| protein with unknown function [Ricinus communis]
gi|223539107|gb|EEF40703.1| protein with unknown function
[Ricinus communis]
Length = 551
Score = 337 bits (865), Expect(2) = e-149
Identities = 180/305 (59%), Positives = 221/305 (72%), Gaps = 3/305 (0%)
Frame = +1
Query: 790 IILYAIAMADYDQESLELC-KNLVKTKDAIESLALYHSSIGRFTNALGALIYPIYGQGEL 966
IILYAI MAD DQE+ K+L+KTKD I+ LALY SSIGRFTNALGA IYPIYGQGEL
Sbjct: 238 IILYAIVMADCDQENTGGANKDLLKTKDGIDRLALYQSSIGRFTNALGAFIYPIYGQGEL 297
Query: 967 PQAFCRCAAVKGSLYVLRMPVRAMLFDKESRHYNGLRLASGQEVFSSQLVMGPSFIVPLP 1146
P AFCR AAVKG +YVLRMPV A+L DK + +Y G+RLASGQE++S +LV+ PSF V P
Sbjct: 298 PPAFCRRAAVKGCIYVLRMPVVALLMDKNNGNYKGIRLASGQEIYSQKLVLDPSFTV--P 355
Query: 1147 SPVQDLQQEKSDGSIVKDIKGQVARAVCITRGSIMSGLSNLLVIFPPRSLYPEQMTSVRA 1326
S D E V+D+K +VARA+CIT+ S+ SN L ++PPRSLYPEQ TS+RA
Sbjct: 356 SSPSDPLHESFCFLSVRDVKQKVARAICITKCSLKPDTSNFLAVYPPRSLYPEQSTSIRA 415
Query: 1327 LQLSSNLAVCPSGLFVLYLSALCDDDAQGKESLHAAIKALLTCSTSDKIASIEKESVE-- 1500
LQ+ +LAVCP+ +F+LYLSALCDD QGK+ L+ A+ ALL+ + S+ S E
Sbjct: 416 LQMGGSLAVCPTNMFILYLSALCDDVHQGKKLLNTAMNALLSSTDSENPESCSTGQTENT 475
Query: 1501 EATPTLLWSAMYIQQLTKISSDDAISLCSMPDGKLDYRDILESTEKLFHKMYPDQEFMPE 1680
E LLWSA+YIQ+LT D+IS SMPDG LDY D+L+S +KLF KMYP++EF PE
Sbjct: 476 EVQSMLLWSALYIQELT-TGQFDSISSTSMPDGNLDYNDVLDSAKKLFQKMYPNEEFFPE 534
Query: 1681 AKDPE 1695
K PE
Sbjct: 535 TKSPE 539
Score = 220 bits (561), Expect(2) = e-149
Identities = 121/242 (50%), Positives = 162/242 (66%), Gaps = 4/242 (1%)
Frame = +3
Query: 45 MADEFSFPCIEPSHFDLIVLGTGLPESVIAAASSANGKSVLHLDPNSFYGXXXXXXXXXX 224
M + S+P I+P+ FDLI++GTGL ES+IAAA+SA+GKSVLH+D N FYG
Sbjct: 1 MTEPPSYPSIDPTTFDLILIGTGLSESIIAAAASASGKSVLHIDQNKFYGSHFSSLSIPD 60
Query: 225 XXXXXXXQQATEQHSHPVTSSSFGDGTTDYVAVDLKSQCLYSDIEISHGSSEDFGPS-RK 401
P + D+ V+L +Q LYS++EIS S+E + K
Sbjct: 61 LTSFLNSNSVPTPSPPPPQTPH-----PDFTVVNLTTQSLYSNVEISSFSNELIEQNCSK 115
Query: 402 FSLDLSGPRVLFCADSTVNLMLKSGASHHVEFKSIDASFIYSDDGRFSTVPDSRSAIFKD 581
FSLD+SGPRVL+CAD++++LM+K+GA+ +VEFKSIDASF+ ++G+ VPDSR+AIFKD
Sbjct: 116 FSLDISGPRVLYCADNSIDLMIKTGANQYVEFKSIDASFVGDENGKLWNVPDSRAAIFKD 175
Query: 582 RSLGLIEKNKLMRFFKLVQEHI---EFKSTAQEESRTISNEDLESPFIDFLTKQRLPPKI 752
+SL L+EKN+LMRFFKLVQ I E + +EE IS +DLESPF+DFL K +L KI
Sbjct: 176 KSLSLMEKNRLMRFFKLVQSQIATNENQEQQEEEDVRISEQDLESPFVDFLNKMKLSSKI 235
Query: 753 KS 758
KS
Sbjct: 236 KS 237
>ref|XP_004146177.1| PREDICTED: rab proteins geranylgeranyltransferase component A 1-like
[Cucumis sativus]
Length = 543
Score = 298 bits (762), Expect(2) = e-138
Identities = 156/312 (50%), Positives = 214/312 (68%), Gaps = 5/312 (1%)
Frame = +1
Query: 790 IILYAIAMADYDQESLELCKNLVKTKDAIESLALYHSSIGRFTNALGALIYPIYGQGELP 969
IILYAI+MAD DQ ++ +N + TK+ I LALYH+SIGRF NA GAL+YPIYGQGEL
Sbjct: 234 IILYAISMADSDQNDNDIGQNRLLTKEGIARLALYHTSIGRFQNAQGALLYPIYGQGELS 293
Query: 970 QAFCRCAAVKGSLYVLRMPVRAMLFDKESRHYNGLRLASGQEVFSSQLVMGPSFIVP--L 1143
QAFCR AAVKG LYVLRMPV A+L DK + Y G+RLASGQ++FS QLV+ P FIVP
Sbjct: 294 QAFCRRAAVKGCLYVLRMPVVALLKDKSNEQYKGVRLASGQDIFSQQLVLDPCFIVPQLF 353
Query: 1144 PSPVQDLQQEKSDGSIVKDIKGQVARAVCITRGSIMSGLSNLLVIFPPRSLYPEQMTSVR 1323
++ LQ S +D+ +VAR +CIT+ SI+S + N L+++PP++L+PEQ++SVR
Sbjct: 354 KLSLESLQDVSS-----RDVNRKVARGICITKHSIVSDVKNCLLVYPPKTLFPEQVSSVR 408
Query: 1324 ALQLSSNLAVCPSGLFVLYLSALCDDDAQGKESLHAAIKALLTCSTSD--KIASIEKESV 1497
LQ+ NLAVCP +FV+Y+S LCD QGKE + AA+ ++ SD +S+++++
Sbjct: 409 VLQIGGNLAVCPEDMFVIYISTLCDSANQGKEMVRAAMNSITLLFVSDCPDSSSVDQDTN 468
Query: 1498 EEATP-TLLWSAMYIQQLTKISSDDAISLCSMPDGKLDYRDILESTEKLFHKMYPDQEFM 1674
E LLWSA+Y+Q+ + + +S MPDG L+Y D+L +T +LF KMYP++E
Sbjct: 469 AEGKDLDLLWSALYVQE-SSVGQFGTVSFTPMPDGSLNYDDLLNATFELFQKMYPNEELF 527
Query: 1675 PEAKDPEDVADE 1710
PE D D+
Sbjct: 528 PETTTAGDHQDD 539
Score = 223 bits (569), Expect(2) = e-138
Identities = 121/239 (50%), Positives = 162/239 (67%), Gaps = 1/239 (0%)
Frame = +3
Query: 45 MADEFSFPCIEPSHFDLIVLGTGLPESVIAAASSANGKSVLHLDPNSFYGXXXXXXXXXX 224
M+D P I+PS FDLIV+GTGLP+S++AAA+SA+GK+VLHLDPN +YG
Sbjct: 1 MSDLSQHPLIDPSTFDLIVVGTGLPQSILAAAASASGKTVLHLDPNPYYGGHFATLPLHD 60
Query: 225 XXXXXXXQQATEQHSHPVTSSSFGDGTTDYVAVDLKSQCLYSDIEISHGSSEDFGP-SRK 401
A S P+ S DYV+VDL+++ LYSD+EIS + E +RK
Sbjct: 61 LTSFLNSASAPLLPSPPLASYD----NQDYVSVDLQTRSLYSDVEISSYAPEVLQEHARK 116
Query: 402 FSLDLSGPRVLFCADSTVNLMLKSGASHHVEFKSIDASFIYSDDGRFSTVPDSRSAIFKD 581
F++DL+GPRVLFCAD ++ +LK G + ++EFKSIDAS+++ +G+ VP SR+AIFKD
Sbjct: 117 FNIDLAGPRVLFCADKCIDAVLKVGVNQYLEFKSIDASYLWDQNGKLVNVPGSRAAIFKD 176
Query: 582 RSLGLIEKNKLMRFFKLVQEHIEFKSTAQEESRTISNEDLESPFIDFLTKQRLPPKIKS 758
+SL L EKN+LMRFFKLVQ+H++ ES IS EDL++PF DFL K RLP K+KS
Sbjct: 177 KSLSLTEKNQLMRFFKLVQKHLD--PAEDGESSKISQEDLDTPFSDFLNKLRLPQKMKS 233