BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011984
         (2100 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]   548   e-153
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...   547   e-153
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...   543   e-152
ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containi...   523   e-146
ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containi...   501   e-139

>emb|CAN64008.1| hypothetical protein VITISV_000279 [Vitis vinifera]
          Length = 549

 Score =  548 bits (1411), Expect = e-153
 Identities = 288/499 (57%), Positives = 360/499 (72%), Gaps = 10/499 (2%)
 Frame = +2

Query: 326  ETPSFTSQESEPPFAPFDENTDFS---SQEGIQDQNPSFLSEENAGS-------DENMST 475
            + P F S  S P     D++T  S   S    +DQ+ S +S+EN G+       D + S 
Sbjct: 53   QNPRFFSNLS-PDIDGDDDSTIESAICSPSESEDQHFSPISDENDGTQIEGFEVDLDKSE 111

Query: 476  EETPDINXXXXXXXXXXXXXXXXXXMESSLEKMDLDLNEEFMVRVIETPLVSGHSLIRFF 655
                D++                  +ESS   M L LNEEF+VRV+ETP V  ++LI FF
Sbjct: 112  GFEVDLDKLESVLSLLQSSGDAVGSLESSFNAMGLSLNEEFVVRVLETPFVPANNLIGFF 171

Query: 656  KWASQKSEFAMTTRVVDCLVRAVGNGRKKKEAYALWDLVKEMGEKERVLLNTEILNELIS 835
            KW+ +   F++TTR VD LVRAV    ++K+ Y+LWDLVKE+GEKE  +LN  ILNELI+
Sbjct: 172  KWSWKNPGFSVTTRAVDALVRAVCQSVRRKDTYSLWDLVKEIGEKENGVLNVGILNELIA 231

Query: 836  LFWKLGKGKAGLEVFNKFEEFGCEPNPDSYYLTIEALCCRSIYDWAWPVCEKMLNVGNLP 1015
             F KLGKGKAGLEVFN F E+G                 RSI+DWA  VCEKMLN  +LP
Sbjct: 232  QFAKLGKGKAGLEVFNAFGEYG-----------------RSIFDWALSVCEKMLNASSLP 274

Query: 1016 DFKKIGSIINCFCKGNMAKDAHLVYLMAKEKNKIPPRSCVNFLISSLCKEDDTIKLALDL 1195
            D +K+ +II+ FCKG   KDA+LVYL+AKEKNK PP++ VNFLI+SLC+ED TI +A+++
Sbjct: 275  DSEKVWNIISWFCKGRKVKDAYLVYLLAKEKNKYPPKTTVNFLIASLCREDGTISMAVEM 334

Query: 1196 LNDFSGDGRKYAIKPFTCVVRSLCRIKDIVEAKKVLLKMIDEGPPPGNTVFNFVINGLSK 1375
            L+DFSG+  KYAIKP+T V+R LCR KD+  AK++LLKMI+ GPPPGN VFNFVINGLSK
Sbjct: 335  LDDFSGEECKYAIKPYTAVIRGLCRSKDVDGAKRLLLKMIEAGPPPGNAVFNFVINGLSK 394

Query: 1376 AGEMDEVRKLVKVMESRGLRPDVYTYSVIVSGYVKGGQMDEARSVLSEAKKKHSKLCPVM 1555
            AGEM+E  K++K+ME+RGL+PDVYTYSVI+SGY  GG M+EA  VLSEAK+ HSKL PV 
Sbjct: 395  AGEMEEAMKMMKLMETRGLKPDVYTYSVIMSGYAHGGMMEEACRVLSEAKRNHSKLSPVT 454

Query: 1556 FHTLIRGYCKLEEFDKAVELLSEMKDSGVKPNADEYNKMIQSLCLKALDWRTAEKLLEEM 1735
            +HTLIRGYCKLE+FDKAVELL EMK+ GV+PN DEYNK+IQSLCLKALDW+TAEKLLEEM
Sbjct: 455  YHTLIRGYCKLEQFDKAVELLGEMKEHGVQPNTDEYNKLIQSLCLKALDWQTAEKLLEEM 514

Query: 1736 KENGLYLNSSIKGLVRSVK 1792
            K+NGL+LN   +GL+R+VK
Sbjct: 515  KQNGLHLNGITRGLIRAVK 533


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  547 bits (1410), Expect = e-153
 Identities = 288/542 (53%), Positives = 382/542 (70%), Gaps = 8/542 (1%)
 Frame = +2

Query: 191  HFSNFL--SQNSRFFSYDS----NPNVQNSIFDENPNSFPQESEPLFANFHETPSFTSQE 352
            HFSN++   QN RF S  S    +  + +S      N++  + E    + H   +F+ Q 
Sbjct: 30   HFSNWVPCQQNLRFLSNLSVNTNDTEIDHSSHGSAQNNYDGDDEGKVTDTH-LHNFSPQA 88

Query: 353  --SEPPFAPFDENTDFSSQEGIQDQNPSFLSEENAGSDENMSTEETPDINXXXXXXXXXX 526
              +E       EN D      +Q ++P    E N      +       I+          
Sbjct: 89   DINEVSHHYSSENGDTHMDNFVQ-RSPDLAEEANTQIHGEVEGHVDYVIDADKLENVLSL 147

Query: 527  XXXXXXXXMESSLEKMDLDLNEEFMVRVIETPLVSGHSLIRFFKWASQKSEFAMTTRVVD 706
                    +ESSL+ MDL L+E+F+V+V+ETPL+ G +LI+FF WA ++ +  +TTR+V 
Sbjct: 148  LQSSTDASLESSLDNMDLHLHEDFIVKVLETPLIVGDNLIKFFNWAIKQPDINVTTRLVH 207

Query: 707  CLVRAVGNGRKKKEAYALWDLVKEMGEKERVLLNTEILNELISLFWKLGKGKAGLEVFNK 886
             LVRA+ +  +KK+AYALWDLVK++GE+E  +LN ++LN+LI+LF KLGKGKA  EVFNK
Sbjct: 208  PLVRAICSELRKKDAYALWDLVKDIGEEENTVLNVDLLNQLIALFSKLGKGKAAFEVFNK 267

Query: 887  FEEFGCEPNPDSYYLTIEALCCRSIYDWAWPVCEKMLNVGNLPDFKKIGSIINCFCKGNM 1066
            F +FGC P+ ++Y+ TIEALC RSI+DWA  V EKML    LPD +KIG II  FCKG+ 
Sbjct: 268  FGDFGCVPDSETYHYTIEALCRRSIFDWASSVREKMLRAEALPDTEKIGKIICWFCKGDK 327

Query: 1067 AKDAHLVYLMAKEKNKIPPRSCVNFLISSLCKEDDTIKLALDLLNDFSGDGRKYAIKPFT 1246
            A DA+LVYL+AKEKNK PP+  VNFLI  LC++++T+KLAL++L+ FSG  RKYAIKPF+
Sbjct: 328  ANDAYLVYLLAKEKNKYPPQPSVNFLIGLLCQKNETVKLALEMLDAFSGPKRKYAIKPFS 387

Query: 1247 CVVRSLCRIKDIVEAKKVLLKMIDEGPPPGNTVFNFVINGLSKAGEMDEVRKLVKVMESR 1426
             V+R+LCRIKD+  AK +L KM+DEGPPPGN VFN +ING SK G+M E  K+ ++M  R
Sbjct: 388  SVIRALCRIKDLDGAKMLLSKMVDEGPPPGNAVFNSIINGYSKCGDMKEAIKMKQLMVRR 447

Query: 1427 GLRPDVYTYSVIVSGYVKGGQMDEARSVLSEAKKKHSKLCPVMFHTLIRGYCKLEEFDKA 1606
            GL+PD++TY+VI+SGY  GGQM+EA  VLSEAKKKHSKL PVM+HT+IRGYCKLE+FDKA
Sbjct: 448  GLKPDLFTYAVIMSGYASGGQMEEACKVLSEAKKKHSKLSPVMYHTVIRGYCKLEQFDKA 507

Query: 1607 VELLSEMKDSGVKPNADEYNKMIQSLCLKALDWRTAEKLLEEMKENGLYLNSSIKGLVRS 1786
            ++LL+EMK  GV+ NADEYNK+IQSLCLKALDW  AEKLLE+MKE+GL+LN   +GL+R+
Sbjct: 508  LDLLAEMKTFGVQANADEYNKLIQSLCLKALDWERAEKLLEKMKEDGLHLNGITRGLIRA 567

Query: 1787 VK 1792
            VK
Sbjct: 568  VK 569


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  543 bits (1399), Expect = e-152
 Identities = 262/415 (63%), Positives = 334/415 (80%), Gaps = 1/415 (0%)
 Frame = +2

Query: 551  MESSLEKMDLDLNEEFMVRVIETPLVSGHSLIRFFKWASQKSEFAMTTRVVDCLVRAVGN 730
            +ES+L+   LDL+EEF+V+V+ETP V G +LIRFFKWA +K + ++TTR +D LV ++ +
Sbjct: 47   LESTLDTFSLDLHEEFVVKVLETPHVLGENLIRFFKWAMKKQDLSVTTRAIDVLVSSICS 106

Query: 731  GR-KKKEAYALWDLVKEMGEKERVLLNTEILNELISLFWKLGKGKAGLEVFNKFEEFGCE 907
               ++K AYALWDLV+E+GEK   L++   LN+LI+L  KLGKGKA LEVF+K ++FGC 
Sbjct: 107  SELRRKNAYALWDLVREIGEKNEGLVSVGSLNQLIALLSKLGKGKAALEVFDKSKDFGCV 166

Query: 908  PNPDSYYLTIEALCCRSIYDWAWPVCEKMLNVGNLPDFKKIGSIINCFCKGNMAKDAHLV 1087
            P+ ++YY TIEALC RS YDWAW VCEKML+ G LPD +KIG II  FCKG+ AKDAH V
Sbjct: 167  PDSETYYYTIEALCRRSFYDWAWIVCEKMLDQGPLPDSEKIGKIICWFCKGSKAKDAHKV 226

Query: 1088 YLMAKEKNKIPPRSCVNFLISSLCKEDDTIKLALDLLNDFSGDGRKYAIKPFTCVVRSLC 1267
            YL+AKEK+K PP+  + FLI SLC++D T+ LAL++LNDF G+ +KYAIKPF+ V+R LC
Sbjct: 227  YLLAKEKSKCPPKPALYFLIGSLCRDDGTVNLALEMLNDFEGEAKKYAIKPFSSVIRGLC 286

Query: 1268 RIKDIVEAKKVLLKMIDEGPPPGNTVFNFVINGLSKAGEMDEVRKLVKVMESRGLRPDVY 1447
            RIKD+  AK++L KMI EGPPPGN VFN VI+G  K G+M E  +++K+MESRGL+PDVY
Sbjct: 287  RIKDLDGAKQLLSKMIVEGPPPGNAVFNTVISGYCKGGDMKEAIEIMKLMESRGLKPDVY 346

Query: 1448 TYSVIVSGYVKGGQMDEARSVLSEAKKKHSKLCPVMFHTLIRGYCKLEEFDKAVELLSEM 1627
            TY+VI+SGY  GGQM+EA  +LSEAKKKHSKL PV +H LIRGYCKL++FDKA+ELL+EM
Sbjct: 347  TYTVIISGYSNGGQMEEACYILSEAKKKHSKLSPVTYHALIRGYCKLDQFDKALELLAEM 406

Query: 1628 KDSGVKPNADEYNKMIQSLCLKALDWRTAEKLLEEMKENGLYLNSSIKGLVRSVK 1792
            +  GV+PNADEYNK+IQSLCLK+LDW TAEKL  EMKE GLYLNS  + L+ +VK
Sbjct: 407  EKFGVQPNADEYNKLIQSLCLKSLDWGTAEKLFAEMKEKGLYLNSITRSLITAVK 461


>ref|XP_004138984.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
            gi|449477884|ref|XP_004155152.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Cucumis sativus]
          Length = 479

 Score =  523 bits (1347), Expect = e-146
 Identities = 252/414 (60%), Positives = 330/414 (79%), Gaps = 1/414 (0%)
 Frame = +2

Query: 554  ESSLEKMDLDLNEEFMVRVIETPLVSGHSLIRFFKWA-SQKSEFAMTTRVVDCLVRAVGN 730
            ESSL++M L LNE+F+++VIETP + G +LIRFF+WA +   EF ++T VVD LVR V  
Sbjct: 50   ESSLDEMRLTLNEDFVLKVIETPHILGENLIRFFRWAVNSHPEFEVSTPVVDVLVRVVCA 109

Query: 731  GRKKKEAYALWDLVKEMGEKERVLLNTEILNELISLFWKLGKGKAGLEVFNKFEEFGCEP 910
              +++ AY+LW+L+KE+G K+  LLN EILN+LI+ F KLGKGKA LEV N +E  GC P
Sbjct: 110  NLRQRVAYSLWELIKEIGGKQTSLLNAEILNQLIAFFSKLGKGKAALEVLNSYEVLGCVP 169

Query: 911  NPDSYYLTIEALCCRSIYDWAWPVCEKMLNVGNLPDFKKIGSIINCFCKGNMAKDAHLVY 1090
            N +SYY T+EALC RS YD AWPVCEKML+ G++P+  ++G II+ FCKGN AK+AH VY
Sbjct: 170  NAESYYFTVEALCRRSSYDLAWPVCEKMLDSGSMPESNRVGKIISLFCKGNKAKNAHSVY 229

Query: 1091 LMAKEKNKIPPRSCVNFLISSLCKEDDTIKLALDLLNDFSGDGRKYAIKPFTCVVRSLCR 1270
            L+AKEK+   P+  +N LI SLC++D+T+KLAL++LNDFS   R+ AIKP+  V+RSLCR
Sbjct: 230  LLAKEKHVNLPQCYMNILIHSLCRDDETVKLALEMLNDFSTGERRRAIKPYMEVIRSLCR 289

Query: 1271 IKDIVEAKKVLLKMIDEGPPPGNTVFNFVINGLSKAGEMDEVRKLVKVMESRGLRPDVYT 1450
            IKD  +AK +L KMI EGPPPGN  FN VI G SKAG+++E  +L+K+MESRGL+PDVY+
Sbjct: 290  IKDTSKAKTLLQKMIAEGPPPGNAAFNAVICGYSKAGDLEEAMELIKLMESRGLKPDVYS 349

Query: 1451 YSVIVSGYVKGGQMDEARSVLSEAKKKHSKLCPVMFHTLIRGYCKLEEFDKAVELLSEMK 1630
            Y+ ++SGY KGGQM EA  VL EAKKKH+KL  + +HTLIR +CKLEE+D A++LLSEMK
Sbjct: 350  YTAVISGYAKGGQMKEAYEVLDEAKKKHAKLSHITYHTLIRNHCKLEEYDSALKLLSEMK 409

Query: 1631 DSGVKPNADEYNKMIQSLCLKALDWRTAEKLLEEMKENGLYLNSSIKGLVRSVK 1792
            + GV+PN DEYNK+I+SLCLKA+DWRT+E+L EEMKENGL+LN   +GL+R+V+
Sbjct: 410  NFGVQPNVDEYNKLIRSLCLKAVDWRTSERLFEEMKENGLHLNGITRGLIRAVR 463


>ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
            mitochondrial-like [Glycine max]
          Length = 539

 Score =  501 bits (1290), Expect = e-139
 Identities = 247/418 (59%), Positives = 325/418 (77%), Gaps = 4/418 (0%)
 Frame = +2

Query: 551  MESSLEKMDLDLNEEFMVRVIETPLVSGHSLIRFFKWASQKSEFAMTTRVVDCLVRAV-G 727
            +ES L+ MDL L+++ + ++ ETP V   +LIRFF WA  +    +TT +V+ LV A+ G
Sbjct: 106  LESCLDDMDLTLHQQLVTKITETPFVLSENLIRFFWWAWSERSLEVTTPMVESLVLAICG 165

Query: 728  NG--RKKKEA-YALWDLVKEMGEKERVLLNTEILNELISLFWKLGKGKAGLEVFNKFEEF 898
            N   RKKKE  Y+LWDLVKE+GEKE  LLN  ILNELIS F +L KGKA LEVF+KFE F
Sbjct: 166  NDDVRKKKEVVYSLWDLVKEIGEKESGLLNVRILNELISSFSRLRKGKAALEVFDKFEAF 225

Query: 899  GCEPNPDSYYLTIEALCCRSIYDWAWPVCEKMLNVGNLPDFKKIGSIINCFCKGNMAKDA 1078
             C P+ D+YY TIEALC R  +DWA  VC+KM++   LPD +K+G+I++  CKG  AK+A
Sbjct: 226  HCVPDADTYYFTIEALCRRRAFDWACGVCQKMVDARTLPDAEKVGAILSWLCKGKKAKEA 285

Query: 1079 HLVYLMAKEKNKIPPRSCVNFLISSLCKEDDTIKLALDLLNDFSGDGRKYAIKPFTCVVR 1258
            H VY++A EK K+PP + V+FL+  LC ED+T+K AL++L D   + R+ AIKPF  VVR
Sbjct: 286  HGVYVVATEKGKLPPVNVVSFLVLKLCGEDETVKSALEILEDIPEEKRERAIKPFLAVVR 345

Query: 1259 SLCRIKDIVEAKKVLLKMIDEGPPPGNTVFNFVINGLSKAGEMDEVRKLVKVMESRGLRP 1438
            +LCRIK++ +AK++LLKMI+ GPPPGN VFNFV+   SKAGEM +  +++++MESRGLRP
Sbjct: 346  ALCRIKEVDKAKELLLKMIENGPPPGNAVFNFVVTAYSKAGEMGKAVEMMRLMESRGLRP 405

Query: 1439 DVYTYSVIVSGYVKGGQMDEARSVLSEAKKKHSKLCPVMFHTLIRGYCKLEEFDKAVELL 1618
            DVYTY+V+ S Y  GG+M+EA+ +L+EAKKKH KL PVMFHTLIRGYCKLE+FD+A++LL
Sbjct: 406  DVYTYTVLASAYSNGGEMEEAQKILAEAKKKHVKLGPVMFHTLIRGYCKLEQFDEALKLL 465

Query: 1619 SEMKDSGVKPNADEYNKMIQSLCLKALDWRTAEKLLEEMKENGLYLNSSIKGLVRSVK 1792
            +EMKD GV+P+ DEY+K+IQSLCLKALDW+ AEKL EEMKE+GL+L    +GL+R+VK
Sbjct: 466  AEMKDYGVRPSVDEYDKLIQSLCLKALDWKMAEKLQEEMKESGLHLKGITRGLIRAVK 523