BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011977
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    97   2e-18
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    88   6e-16
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    81   1e-13
ref|XP_003637128.1| F-box family protein [Medicago truncatula] g...    78   7e-13
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 53/122 (43%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
 Frame = +3

Query: 6   DIISRLPITCLAQCRCVCKAWGKIIQHPHFTSMHHTKAIQLHTNSFSLVLYVRFP--SKI 179
           DI+SRLPIT L Q +CVC+AW  ++Q P    ++ + + Q  T+   L+L+  FP  + +
Sbjct: 35  DILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQ-DTDHPCLILHCDFPIRNNL 93

Query: 180 YFLE---HEIGDKPDNVKMVKPRFYPF--KFDVVGSCNGLLCLSDQLYNDPIYVCNPVIG 344
           YF++   HE  ++ + VK +   F     +F+VVGSCNGLLCLSD LYND +Y+ NP  G
Sbjct: 94  YFVDFAAHE--EEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCLSDSLYNDSLYIYNPFTG 151

Query: 345 EY 350
            Y
Sbjct: 152 CY 153


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 48/122 (39%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
 Frame = +3

Query: 6   DIISRLPITCLAQCRCVCKAWGKIIQHPHFTSMHHTKAIQLHTNSFSLVLYVRFP--SKI 179
           DI+SRLPIT L + +CVC+AW  +   P   +++ + + Q       ++L+  FP  + +
Sbjct: 35  DILSRLPITSLVKFKCVCRAWRAMALDPEVVNLYLSCSTQ--ETDPCVILHCDFPIRNNL 92

Query: 180 YFLE---HEIGDKPDNVKMVKPRFYPF--KFDVVGSCNGLLCLSDQLYNDPIYVCNPVIG 344
           YF++   HE  ++ + VK ++  F     +F+VVGSCNGLLCLSD L+ND +Y+ NP  G
Sbjct: 93  YFVDFAAHE--EEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLSDSLFNDSLYIYNPFTG 150

Query: 345 EY 350
            Y
Sbjct: 151 RY 152


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 5/123 (4%)
 Frame = +3

Query: 3   LDIISRLPITCLAQCRCVCKAWGKIIQHPHFTSMHHTKAIQLHTNSFSLVLYVRFPSKIY 182
           LDI+SRLP+T L Q R VC+ W  + Q     S H  +  Q +     L+L+  +P +  
Sbjct: 36  LDILSRLPVTSLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNP---CLILHCDYPIRNQ 92

Query: 183 FLEHEIGDKPDNVKMVKPRFYPF-----KFDVVGSCNGLLCLSDQLYNDPIYVCNPVIGE 347
               +I  +  +  MV+    PF     +F+VVGSCNGLLCL+D L+ D +YV NP   +
Sbjct: 93  ISFVDISAESRDKDMVRKLTIPFWASMPEFEVVGSCNGLLCLADSLFKDAVYVHNPFTRD 152

Query: 348 YVQ 356
           + Q
Sbjct: 153 FKQ 155


>ref|XP_003637128.1| F-box family protein [Medicago truncatula]
           gi|355503063|gb|AES84266.1| F-box family protein
           [Medicago truncatula]
          Length = 230

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
 Frame = +3

Query: 6   DIISRLPITCLAQCRCVCKAWGKIIQHPHFTSMHHTKAIQLHTNSFSLVLYVRFPSKIYF 185
           D++ RLPI  +  C+CVC+ W  +I  PHF  +H                + R P     
Sbjct: 99  DVLLRLPIKSVLVCKCVCRTWNTVISDPHFAKVH----------------FERSPYGFLI 142

Query: 186 LEHEIGDKPDNVKMVKPRFYPFKFDVVGSC-NGLLCLSDQLYNDPIYVCNPVIGEYV 353
           L  +    P     V       +FDVV SC NGLLCL D +  DP+ VCNPVIGE++
Sbjct: 143 LTCDRRLVPRTNLTVNATPKDQRFDVVNSCINGLLCLFDPINEDPLVVCNPVIGEFI 199


>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
 Frame = +3

Query: 3   LDIISRLPITCLAQCRCVCKAWGKIIQHPHFTSMHHTKAIQLHTNSFSLVLYV------R 164
           +DI+SRLP   +  C CVCK W  +I  P F  +HHT+A        SL+L        R
Sbjct: 41  VDILSRLPFKTIFSCMCVCKKWKDLILAPDFAKLHHTRA------PASLILRSHRHGRRR 94

Query: 165 FPSKIYFLEHEIGD--KPDNVKMVKPRF-YPF-KFDVVGSCNGLLCLSDQLYNDPIYVCN 332
            P  +  L+ E  D   PD    + P F +P   F++V +CNGL+C+      + I + N
Sbjct: 95  RPRSLCLLDLEASDICSPDAAVKLSPDFGFPTGNFEIVNTCNGLICIRHFHSPNDISILN 154

Query: 333 PVIGEYV 353
           P++G+Y+
Sbjct: 155 PLVGDYI 161