BLASTX nr result

ID: Cimicifuga21_contig00011976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011976
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282120.1| PREDICTED: PGR5-like protein 1A, chloroplast...   436   e-120
emb|CBI34776.3| unnamed protein product [Vitis vinifera]              435   e-120
gb|AFK47748.1| unknown [Lotus japonicus]                              431   e-118
ref|XP_003549873.1| PREDICTED: PGR5-like protein 1A, chloroplast...   430   e-118
ref|XP_002509675.1| conserved hypothetical protein [Ricinus comm...   428   e-117

>ref|XP_002282120.1| PREDICTED: PGR5-like protein 1A, chloroplastic-like [Vitis
           vinifera]
          Length = 331

 Score =  436 bits (1121), Expect = e-120
 Identities = 228/328 (69%), Positives = 261/328 (79%), Gaps = 3/328 (0%)
 Frame = -3

Query: 994 STEMVTQLGFTLTSPPRLLFAPLTKXXXXXXXXXXXXXXXXXXI-QLISHRLS-PRRVFL 821
           S+ M T+LGF LT+ PRL  +   K                    QL+  +L   RR+F+
Sbjct: 3   SSLMATKLGFALTTAPRLFASSSRKPLISPASLSSASSCSRVESFQLVGRQLRLSRRLFI 62

Query: 820 ISPKATEQQQGKVKEEDDVVDSNIMPYCSIEK-QKKSLGELEQDFLQALQSFYYEGKAIM 644
           ISPKAT  QQG+V + DDVVDS I+PYCSI+K +K+S+GE+EQDFLQALQSFYYEGKAIM
Sbjct: 63  ISPKATADQQGQV-QGDDVVDSKILPYCSIDKKEKRSIGEMEQDFLQALQSFYYEGKAIM 121

Query: 643 SNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDEEYDKLKLRLKAEGS 464
           SNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYV+GNPI+SDEE+D LK++LK EGS
Sbjct: 122 SNEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVAGNPIMSDEEFDDLKIKLKIEGS 181

Query: 463 DIVVEGPRCSLRSRKVYSDLSVDYFKMFLLNVPXXXXXXXXXXXXXXXTGFEITYLLELP 284
           +IVVEGPRCSLRS+KVYSDLSVDY KMFLLNVP               TGFEIT+LLEL 
Sbjct: 182 EIVVEGPRCSLRSKKVYSDLSVDYLKMFLLNVPAAVVALSLFFFLDDVTGFEITFLLELQ 241

Query: 283 EPFSFIFTWFAALPLIFYLSQAFTNAIVKDFLILKGPCPNCGTENVSFFGTILSIPSGGE 104
           EPFSFIFTWFAA+PLIF+LSQ  T  I+KDFLILKGPCPNCGTENVSFFGTILSI +GG 
Sbjct: 242 EPFSFIFTWFAAVPLIFWLSQTITKFILKDFLILKGPCPNCGTENVSFFGTILSISNGGT 301

Query: 103 SNSIKCSNCGTELVYDSNTRLITLPEGS 20
           +N++KCSNC T++VYDS TRLITLPEGS
Sbjct: 302 TNNLKCSNCETQMVYDSKTRLITLPEGS 329


>emb|CBI34776.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  435 bits (1119), Expect = e-120
 Identities = 227/325 (69%), Positives = 259/325 (79%), Gaps = 3/325 (0%)
 Frame = -3

Query: 985 MVTQLGFTLTSPPRLLFAPLTKXXXXXXXXXXXXXXXXXXI-QLISHRLS-PRRVFLISP 812
           M T+LGF LT+ PRL  +   K                    QL+  +L   RR+F+ISP
Sbjct: 1   MATKLGFALTTAPRLFASSSRKPLISPASLSSASSCSRVESFQLVGRQLRLSRRLFIISP 60

Query: 811 KATEQQQGKVKEEDDVVDSNIMPYCSIEK-QKKSLGELEQDFLQALQSFYYEGKAIMSNE 635
           KAT  QQG+V + DDVVDS I+PYCSI+K +K+S+GE+EQDFLQALQSFYYEGKAIMSNE
Sbjct: 61  KATADQQGQV-QGDDVVDSKILPYCSIDKKEKRSIGEMEQDFLQALQSFYYEGKAIMSNE 119

Query: 634 EFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDEEYDKLKLRLKAEGSDIV 455
           EFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYV+GNPI+SDEE+D LK++LK EGS+IV
Sbjct: 120 EFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVAGNPIMSDEEFDDLKIKLKIEGSEIV 179

Query: 454 VEGPRCSLRSRKVYSDLSVDYFKMFLLNVPXXXXXXXXXXXXXXXTGFEITYLLELPEPF 275
           VEGPRCSLRS+KVYSDLSVDY KMFLLNVP               TGFEIT+LLEL EPF
Sbjct: 180 VEGPRCSLRSKKVYSDLSVDYLKMFLLNVPAAVVALSLFFFLDDVTGFEITFLLELQEPF 239

Query: 274 SFIFTWFAALPLIFYLSQAFTNAIVKDFLILKGPCPNCGTENVSFFGTILSIPSGGESNS 95
           SFIFTWFAA+PLIF+LSQ  T  I+KDFLILKGPCPNCGTENVSFFGTILSI +GG +N+
Sbjct: 240 SFIFTWFAAVPLIFWLSQTITKFILKDFLILKGPCPNCGTENVSFFGTILSISNGGTTNN 299

Query: 94  IKCSNCGTELVYDSNTRLITLPEGS 20
           +KCSNC T++VYDS TRLITLPEGS
Sbjct: 300 LKCSNCETQMVYDSKTRLITLPEGS 324


>gb|AFK47748.1| unknown [Lotus japonicus]
          Length = 327

 Score =  431 bits (1108), Expect = e-118
 Identities = 230/324 (70%), Positives = 251/324 (77%), Gaps = 3/324 (0%)
 Frame = -3

Query: 979 TQLGFTLTSPPRLLFAPLTKXXXXXXXXXXXXXXXXXXIQLISHRLS-PRRVFLISPKAT 803
           ++L FTLTSP      P T                   IQ    +L   RR+FL+SPKAT
Sbjct: 5   SKLAFTLTSPRSC--TPPTPTPLIPLSSSSFTSSRFNLIQFNGRQLCLRRRLFLLSPKAT 62

Query: 802 EQQQGKVKE-EDDVVDSNIMPYCSIEKQ-KKSLGELEQDFLQALQSFYYEGKAIMSNEEF 629
             QQGKV+E E+  VDS I PYCSI+K+ KKS+GE+EQDFLQALQSFYYEGKAIMSNEEF
Sbjct: 63  ADQQGKVEEFEESAVDSKIFPYCSIDKKDKKSVGEMEQDFLQALQSFYYEGKAIMSNEEF 122

Query: 628 DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDEEYDKLKLRLKAEGSDIVVE 449
           DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSG PILSD+EYD LK+RLK  GS+IVVE
Sbjct: 123 DNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGKPILSDKEYDDLKMRLKMNGSEIVVE 182

Query: 448 GPRCSLRSRKVYSDLSVDYFKMFLLNVPXXXXXXXXXXXXXXXTGFEITYLLELPEPFSF 269
           GPRCSLRSRKVYSDLSVDY KMFLLNVP               TGFEITYLLELPEPFSF
Sbjct: 183 GPRCSLRSRKVYSDLSVDYLKMFLLNVPATVIALGLFFFLDDLTGFEITYLLELPEPFSF 242

Query: 268 IFTWFAALPLIFYLSQAFTNAIVKDFLILKGPCPNCGTENVSFFGTILSIPSGGESNSIK 89
           IFTWFAA+PLI +L+   TN I+KDFLILKGPCPNCGTEN SFFGTILSI SGG SN +K
Sbjct: 243 IFTWFAAVPLIVWLALTITNVIIKDFLILKGPCPNCGTENTSFFGTILSIASGGSSNKVK 302

Query: 88  CSNCGTELVYDSNTRLITLPEGSS 17
           CSNC TE+VYDS TRLITLPEGS+
Sbjct: 303 CSNCATEMVYDSATRLITLPEGSN 326


>ref|XP_003549873.1| PREDICTED: PGR5-like protein 1A, chloroplastic-like [Glycine max]
          Length = 332

 Score =  430 bits (1106), Expect = e-118
 Identities = 228/328 (69%), Positives = 259/328 (78%), Gaps = 7/328 (2%)
 Frame = -3

Query: 979 TQLGFTLTSPPRLLFAPLTKXXXXXXXXXXXXXXXXXXIQLI---SHRLSPRRVFLISPK 809
           ++L FTLT PPR   APLT                     +     H    RR+FL+SPK
Sbjct: 5   SKLAFTLT-PPRPCTAPLTPISSLSSSSSSSSASASGINFIQFNGRHLCLRRRLFLLSPK 63

Query: 808 ATEQQQGKVKE-EDD--VVDSNIMPYCSIEK-QKKSLGELEQDFLQALQSFYYEGKAIMS 641
           AT  QQGKV+E EDD  VVDS I+PYCSI+K +KKS+GELEQ+FLQALQ+FYYEGKAIMS
Sbjct: 64  ATADQQGKVEEFEDDSNVVDSKILPYCSIDKKEKKSIGELEQEFLQALQAFYYEGKAIMS 123

Query: 640 NEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDEEYDKLKLRLKAEGSD 461
           NEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPI+SD+E+D+LKLRLK EGS+
Sbjct: 124 NEEFDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPIMSDKEFDELKLRLKKEGSE 183

Query: 460 IVVEGPRCSLRSRKVYSDLSVDYFKMFLLNVPXXXXXXXXXXXXXXXTGFEITYLLELPE 281
           IV EGPRCSLRS+KVYSDLSVDY KMFLLNVP               TGFEITYLLELPE
Sbjct: 184 IVAEGPRCSLRSKKVYSDLSVDYLKMFLLNVPATVIALGLFFFLDDLTGFEITYLLELPE 243

Query: 280 PFSFIFTWFAALPLIFYLSQAFTNAIVKDFLILKGPCPNCGTENVSFFGTILSIPSGGES 101
           PFSFIFTWFAA+PLI +++ + TNAIVKDF+ILKGPCPNCGTEN SFFGTILSI +GG +
Sbjct: 244 PFSFIFTWFAAVPLIVWIALSLTNAIVKDFVILKGPCPNCGTENTSFFGTILSISNGGST 303

Query: 100 NSIKCSNCGTELVYDSNTRLITLPEGSS 17
           N++KCSNCGT + YDS +RLITLPEGS+
Sbjct: 304 NTVKCSNCGTAMEYDSTSRLITLPEGSN 331


>ref|XP_002509675.1| conserved hypothetical protein [Ricinus communis]
           gi|223549574|gb|EEF51062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 320

 Score =  428 bits (1100), Expect = e-117
 Identities = 228/325 (70%), Positives = 257/325 (79%), Gaps = 2/325 (0%)
 Frame = -3

Query: 985 MVTQLGFTLTSPPRLLFAPLTKXXXXXXXXXXXXXXXXXXIQLISHRLSPRRVFLISPKA 806
           M ++L F+LT P R+  AP+ K                       H    RR+ L+  KA
Sbjct: 1   MASKLAFSLTFP-RVYSAPILKPLISLSSSSRIHSSHLHG----KHLSVRRRILLLPIKA 55

Query: 805 T-EQQQGKVKEEDDVVDSNIMPYCSIEKQ-KKSLGELEQDFLQALQSFYYEGKAIMSNEE 632
           T +QQQGKV E D+VVD  I+ YCSI+K+ KKS+GE+EQ+FLQALQ+FYYEGKAIMSNEE
Sbjct: 56  TADQQQGKV-EGDEVVDGKILQYCSIDKKDKKSIGEMEQEFLQALQAFYYEGKAIMSNEE 114

Query: 631 FDNLKEELMWEGSSVVMLSSDEQKFLEASMAYVSGNPILSDEEYDKLKLRLKAEGSDIVV 452
           FDNLKEELMWEGSSVVMLS DEQKFLEASMAYVSGNPI+SDEE+D+LKLRLK EGS+IVV
Sbjct: 115 FDNLKEELMWEGSSVVMLSCDEQKFLEASMAYVSGNPIMSDEEFDQLKLRLKQEGSEIVV 174

Query: 451 EGPRCSLRSRKVYSDLSVDYFKMFLLNVPXXXXXXXXXXXXXXXTGFEITYLLELPEPFS 272
           EGPRCSLRSRKVYSDLSVDY KMFLLNVP               TGFEITYLLELPEPFS
Sbjct: 175 EGPRCSLRSRKVYSDLSVDYLKMFLLNVPAAVVALGLFFFLDDLTGFEITYLLELPEPFS 234

Query: 271 FIFTWFAALPLIFYLSQAFTNAIVKDFLILKGPCPNCGTENVSFFGTILSIPSGGESNSI 92
           FIFTWFAA+P+I +LS +FTNAIVKDFLILKGPCPNCGTEN SFFGTILSI SGG +NS+
Sbjct: 235 FIFTWFAAVPVIVWLSLSFTNAIVKDFLILKGPCPNCGTENQSFFGTILSISSGGTTNSV 294

Query: 91  KCSNCGTELVYDSNTRLITLPEGSS 17
           KCSNCGT++VYDS TRLITLPEGS+
Sbjct: 295 KCSNCGTDMVYDSKTRLITLPEGSN 319


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