BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011972
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   347   3e-93
ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   321   2e-85
ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ...   314   4e-83
ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|2...   310   7e-82
gb|AFK38781.1| unknown [Lotus japonicus]                              300   7e-79

>ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera]
          Length = 256

 Score =  347 bits (891), Expect = 3e-93
 Identities = 183/302 (60%), Positives = 207/302 (68%)
 Frame = +2

Query: 158  MANNGDILMIEAPPQASVSSLSGIAREVIIDALPYIDDDYGDPKVKEEVDRLVEEEMRRS 337
            MAN+GDILM+EAPPQAS  +         IDALPYIDDDYG PKVKEEVDRLVE+EMRRS
Sbjct: 1    MANDGDILMLEAPPQASRPA-------EFIDALPYIDDDYGHPKVKEEVDRLVEDEMRRS 53

Query: 338  TKKPSDFLKSFPVAAKSNFEXXXXXXXXXXXXXXXXXAAKSNFENHPMLAREYERVRAGK 517
            +KKPSDFLK  P                              F NHPMLAREYERVRAGK
Sbjct: 54   SKKPSDFLKDLP------------------------PLPPFGFHNHPMLAREYERVRAGK 89

Query: 518  PPMTMDVSRYNLEPPPGNKRNDSNAWKQHLENAQSSLQHQVIRMENLDLMSKHGGDIWKH 697
            PP+ +D+SRY LE PP NKRND  AWK  L+ AQ  LQHQVIR+ENL+LMSKHG D+WK 
Sbjct: 90   PPVALDMSRYGLEMPPMNKRNDETAWKHALQKAQRLLQHQVIRLENLELMSKHGADVWKQ 149

Query: 698  HNQRLEAFLSRMQAIALGYNEGIEAVNRERXXXXXXXXXXXXXXXXXXXXAVNRERKYHQ 877
            HNQRLEA+LSRMQA+A+  NE IE                           VNRERKYHQ
Sbjct: 150  HNQRLEAYLSRMQALAMEQNEKIE--------------------------TVNRERKYHQ 183

Query: 878  QNTAVELNALSFQWRELCEKNIEIQAACASMENHIEDLRREAVDRGWNLEVNMENGSLLH 1057
            QNTA ELNALS QW+ELCEKNIEI+ ACA +EN+IE+LRREA +RGWNL+ N++NGSL H
Sbjct: 184  QNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDANIDNGSLSH 243

Query: 1058 SE 1063
            SE
Sbjct: 244  SE 245


>ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
            gi|449503115|ref|XP_004161841.1| PREDICTED:
            pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
          Length = 256

 Score =  321 bits (823), Expect = 2e-85
 Identities = 167/296 (56%), Positives = 199/296 (67%)
 Frame = +2

Query: 164  NNGDILMIEAPPQASVSSLSGIAREVIIDALPYIDDDYGDPKVKEEVDRLVEEEMRRSTK 343
            NNGDILM+EAPPQ S  +    A   +IDALPYIDDDY DP+VK EVDRLVEEEMRRS+K
Sbjct: 6    NNGDILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65

Query: 344  KPSDFLKSFPVAAKSNFEXXXXXXXXXXXXXXXXXAAKSNFENHPMLAREYERVRAGKPP 523
            +P+DFLK  P                           K  FE+HPMLAREYERVRAG+PP
Sbjct: 66   RPADFLKDLP------------------------PLPKFKFEDHPMLAREYERVRAGRPP 101

Query: 524  MTMDVSRYNLEPPPGNKRNDSNAWKQHLENAQSSLQHQVIRMENLDLMSKHGGDIWKHHN 703
            + +DV+RY LE PP NK+ND  AWKQ L+ AQ  L+HQV+R+ENLDLMSK+G DIWK HN
Sbjct: 102  VPLDVARYKLETPPPNKKNDETAWKQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHN 161

Query: 704  QRLEAFLSRMQAIALGYNEGIEAVNRERXXXXXXXXXXXXXXXXXXXXAVNRERKYHQQN 883
            ++LEA LSRMQ +A   NE IE                           VNRERK+HQQN
Sbjct: 162  KQLEALLSRMQKLAQEQNEKIE--------------------------KVNRERKFHQQN 195

Query: 884  TAVELNALSFQWRELCEKNIEIQAACASMENHIEDLRREAVDRGWNLEVNMENGSL 1051
             A EL+ALS QW+ELCEKN+EIQ AC  +E  I++LRREA ++GWNLEVN+ENGS+
Sbjct: 196  AAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVNVENGSV 251


>ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula]
            gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor
            SPF27-like protein [Medicago truncatula]
            gi|388502546|gb|AFK39339.1| unknown [Medicago truncatula]
          Length = 261

 Score =  314 bits (804), Expect = 4e-83
 Identities = 166/304 (54%), Positives = 196/304 (64%)
 Frame = +2

Query: 155  NMANNGDILMIEAPPQASVSSLSGIAREVIIDALPYIDDDYGDPKVKEEVDRLVEEEMRR 334
            N  +NGD+LM+EAPP    SS S      IIDALPYIDDDY DP+VK EVDRLVEEEMRR
Sbjct: 11   NSNSNGDVLMLEAPPSYGRSSHSDAE---IIDALPYIDDDYSDPRVKIEVDRLVEEEMRR 67

Query: 335  STKKPSDFLKSFPVAAKSNFEXXXXXXXXXXXXXXXXXAAKSNFENHPMLAREYERVRAG 514
            S+KKP+DFLK FP                            SNF ++PM+ REYERVRAG
Sbjct: 68   SSKKPADFLKDFP------------------------PLPSSNFHDYPMIGREYERVRAG 103

Query: 515  KPPMTMDVSRYNLEPPPGNKRNDSNAWKQHLENAQSSLQHQVIRMENLDLMSKHGGDIWK 694
            +PP+++D SRY LE PP NKRND  AWK  ++ AQ  LQ+Q IRMENLDL+ KHG D WK
Sbjct: 104  RPPVSLDRSRYELEAPPVNKRNDETAWKLAIQRAQRLLQYQTIRMENLDLLFKHGPDAWK 163

Query: 695  HHNQRLEAFLSRMQAIALGYNEGIEAVNRERXXXXXXXXXXXXXXXXXXXXAVNRERKYH 874
             HNQRLE +LSRMQ +A   N+ IE                           VNRERKYH
Sbjct: 164  QHNQRLEVYLSRMQKLAQEQNDKIE--------------------------KVNRERKYH 197

Query: 875  QQNTAVELNALSFQWRELCEKNIEIQAACASMENHIEDLRREAVDRGWNLEVNMENGSLL 1054
            QQNTA ELNALS QW ELC+KNI+I+  CAS+E H+ +LRREA +RGWNL+   ENG L 
Sbjct: 198  QQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWNLDAITENGQLA 257

Query: 1055 HSEN 1066
            +SE+
Sbjct: 258  NSES 261


>ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|222869079|gb|EEF06210.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  310 bits (793), Expect = 7e-82
 Identities = 167/299 (55%), Positives = 199/299 (66%), Gaps = 1/299 (0%)
 Frame = +2

Query: 167  NGDILMIEAPPQASVSSLSGIAREVIIDALPYIDDDYGDPKVKEEVDRLVEEEMRRSTKK 346
            NGD+LM+EA P+AS    S  +   IIDALPYIDDDYG+P VK EVDRLVEEEMRRS+KK
Sbjct: 8    NGDMLMLEAAPEAS-RPWSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEEEMRRSSKK 66

Query: 347  PSDFLKSFPVAAKSNFEXXXXXXXXXXXXXXXXXAAKSNFENHPMLAREYERVRAGKPPM 526
            PSDFLK  P                           K  FEN+PMLA+EYERVRAG+PP+
Sbjct: 67   PSDFLKELP------------------------PVPKFTFENYPMLAKEYERVRAGRPPV 102

Query: 527  TMDVSRYN-LEPPPGNKRNDSNAWKQHLENAQSSLQHQVIRMENLDLMSKHGGDIWKHHN 703
            T+D SRY+ L+ P  NK ND  AWKQ L+ AQ  LQHQVIR+ENL+LMSK+G ++W  HN
Sbjct: 103  TLDFSRYSHLDLPAANKMNDETAWKQALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHN 162

Query: 704  QRLEAFLSRMQAIALGYNEGIEAVNRERXXXXXXXXXXXXXXXXXXXXAVNRERKYHQQN 883
            ++LE  L+R Q +A   NE IEAVNRE                          RKYHQQN
Sbjct: 163  RQLETMLTRTQKLAREQNEKIEAVNRE--------------------------RKYHQQN 196

Query: 884  TAVELNALSFQWRELCEKNIEIQAACASMENHIEDLRREAVDRGWNLEVNMENGSLLHS 1060
            TA ELNALS QW+ELC+KNIEIQ AC  +EN IE+L+RE+ +RGWN+E N+ENGSLLHS
Sbjct: 197  TAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSERGWNVEANIENGSLLHS 255


>gb|AFK38781.1| unknown [Lotus japonicus]
          Length = 248

 Score =  300 bits (767), Expect = 7e-79
 Identities = 160/299 (53%), Positives = 193/299 (64%)
 Frame = +2

Query: 170  GDILMIEAPPQASVSSLSGIAREVIIDALPYIDDDYGDPKVKEEVDRLVEEEMRRSTKKP 349
            G++LM+EAPP  S   L   +   IIDALPYIDDDYGDP+VK EVDRLVE+EMRRS+KKP
Sbjct: 2    GEVLMLEAPP--SYGGLPRSSDAEIIDALPYIDDDYGDPRVKVEVDRLVEDEMRRSSKKP 59

Query: 350  SDFLKSFPVAAKSNFEXXXXXXXXXXXXXXXXXAAKSNFENHPMLAREYERVRAGKPPMT 529
            +DFLK FP                            SN E +PM+AREYERVRAG+PP++
Sbjct: 60   ADFLKDFP------------------------PLPTSNLEGYPMIAREYERVRAGRPPVS 95

Query: 530  MDVSRYNLEPPPGNKRNDSNAWKQHLENAQSSLQHQVIRMENLDLMSKHGGDIWKHHNQR 709
            +D SRY LE PP NKRND  AWK  L+ AQ  LQ+Q++RMEN++L+ K+G D WK HN R
Sbjct: 96   IDRSRYELEIPPLNKRNDETAWKHALQRAQRLLQYQMMRMENIELLLKYGPDAWKQHNHR 155

Query: 710  LEAFLSRMQAIALGYNEGIEAVNRERXXXXXXXXXXXXXXXXXXXXAVNRERKYHQQNTA 889
            LE +L RMQ +A   NE IE                           VNRERKYHQQNTA
Sbjct: 156  LEVYLLRMQKLAQEQNEKIE--------------------------KVNRERKYHQQNTA 189

Query: 890  VELNALSFQWRELCEKNIEIQAACASMENHIEDLRREAVDRGWNLEVNMENGSLLHSEN 1066
             ELNALS QW ELC+KNI+I AACAS+E  I +L+REA +RGWNL+   ENG L +SE+
Sbjct: 190  YELNALSTQWNELCQKNIDINAACASVETRINELKREAAERGWNLDAISENGQLANSES 248