BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011970
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26796.1| unknown [Picea sitchensis]                             356   3e-96
gb|ABK23566.1| unknown [Picea sitchensis]                             350   2e-94
ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteo...   350   3e-94
gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| T...   348   1e-93
ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subun...   347   1e-93

>gb|ABK26796.1| unknown [Picea sitchensis]
          Length = 248

 Score =  356 bits (914), Expect = 3e-96
 Identities = 181/205 (88%), Positives = 190/205 (92%)
 Frame = +1

Query: 166 RRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIDDSSASVVVAQLLFLESENPS 345
           RRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPI D +ASVVVAQLLFLESENP 
Sbjct: 32  RRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQ 91

Query: 346 KPINMYINSPGGVVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPN 525
           KPINMYINSPGGVVTAGLAIYDTMQYI+SPV+TLCIGQAASMGSLLL AG+ GERRALPN
Sbjct: 92  KPINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPN 151

Query: 526 ARVMIHQPSGGASGQASDIAIQAKEILKVRERLNLIYTKHTGQKIEMIEKSMDRDMFMSP 705
           ARVMIHQPSGGASGQASDIAI AKEILK RERLN +Y KHTGQ IE IE+ M+RD FMSP
Sbjct: 152 ARVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSP 211

Query: 706 EEAKEFGLIDEVIEHRPTELVTDAV 780
           +EAKEFGLIDEVIEHRP  LVTD+V
Sbjct: 212 DEAKEFGLIDEVIEHRPISLVTDSV 236


>gb|ABK23566.1| unknown [Picea sitchensis]
          Length = 243

 Score =  350 bits (898), Expect = 2e-94
 Identities = 180/225 (80%), Positives = 197/225 (87%), Gaps = 5/225 (2%)
 Frame = +1

Query: 121 PSLSAISKLSSMET-----TRRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPID 285
           P+ SAI     + T     ++RSYGLIPMVIE TSRGERAYDIFSRLLKERIICING I+
Sbjct: 8   PAASAILNSMVLNTPTSFHSKRSYGLIPMVIEQTSRGERAYDIFSRLLKERIICINGVIE 67

Query: 286 DSSASVVVAQLLFLESENPSKPINMYINSPGGVVTAGLAIYDTMQYIRSPVSTLCIGQAA 465
           D +A+VVVAQLLFLESENP+KPIN+YINSPGGVVTAGLAIYDTMQYIRSPVST C+GQAA
Sbjct: 68  DDTAAVVVAQLLFLESENPAKPINLYINSPGGVVTAGLAIYDTMQYIRSPVSTFCMGQAA 127

Query: 466 SMGSLLLTAGAKGERRALPNARVMIHQPSGGASGQASDIAIQAKEILKVRERLNLIYTKH 645
           SMGSLLL AGAKGERR+LPNAR+MIHQPSGGASGQASDIAIQAKEIL  R+RLN +Y KH
Sbjct: 128 SMGSLLLAAGAKGERRSLPNARIMIHQPSGGASGQASDIAIQAKEILLTRDRLNSLYAKH 187

Query: 646 TGQKIEMIEKSMDRDMFMSPEEAKEFGLIDEVIEHRPTELVTDAV 780
           TGQ I+ IEK M+RDMFMSPEEAKEFGL+D VIE RP  LVTDAV
Sbjct: 188 TGQSIDKIEKCMERDMFMSPEEAKEFGLVDTVIEQRPMSLVTDAV 232


>ref|XP_003581445.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 2,
           mitochondrial-like [Brachypodium distachyon]
          Length = 300

 Score =  350 bits (897), Expect = 3e-94
 Identities = 182/230 (79%), Positives = 198/230 (86%), Gaps = 1/230 (0%)
 Frame = +1

Query: 94  MWNRIATAK-PSLSAISKLSSMETTRRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICI 270
           M  R+A+A  P     S   +  T RR YGL+PMVIEHTSRGERAYDIFSRLLKERI+CI
Sbjct: 47  MLRRLASAAAPRAFFSSSPPAGYTARREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCI 106

Query: 271 NGPIDDSSASVVVAQLLFLESENPSKPINMYINSPGGVVTAGLAIYDTMQYIRSPVSTLC 450
           +GPI D +AS+VVAQLLFLESENP+KPI++YINSPGGVVTAGLAIYDTMQYIRSPV+TLC
Sbjct: 107 HGPIADDTASLVVAQLLFLESENPAKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLC 166

Query: 451 IGQAASMGSLLLTAGAKGERRALPNARVMIHQPSGGASGQASDIAIQAKEILKVRERLNL 630
           IGQAASMGSLLL AGA GERRALPNARVMIHQPSGGASGQASDIAI AKEILKVR+RLN 
Sbjct: 167 IGQAASMGSLLLAAGAPGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNK 226

Query: 631 IYTKHTGQKIEMIEKSMDRDMFMSPEEAKEFGLIDEVIEHRPTELVTDAV 780
           IY KHTGQ IE IEK M+RDMFM P EA  +GLIDEVIEHRP  LV+DAV
Sbjct: 227 IYAKHTGQAIESIEKCMERDMFMDPVEAHSWGLIDEVIEHRPVSLVSDAV 276


>gb|ACN34096.1| unknown [Zea mays] gi|414586294|tpg|DAA36865.1| TPA: ATP-dependent
           Clp protease proteolytic subunit [Zea mays]
          Length = 259

 Score =  348 bits (892), Expect = 1e-93
 Identities = 173/207 (83%), Positives = 190/207 (91%)
 Frame = +1

Query: 160 TTRRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIDDSSASVVVAQLLFLESEN 339
           T RR YGL+PMVIEHTSRGERAYDIFSRLLKERI+CI+GPI D +AS+VVAQLLFLESEN
Sbjct: 29  TPRREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESEN 88

Query: 340 PSKPINMYINSPGGVVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRAL 519
           P+KP+++YINSPGGVVTAGLAIYDTMQYIRSPV+TLCIGQAASM SLLL AGA GERRAL
Sbjct: 89  PAKPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRAL 148

Query: 520 PNARVMIHQPSGGASGQASDIAIQAKEILKVRERLNLIYTKHTGQKIEMIEKSMDRDMFM 699
           PNARVMIHQPSGGASGQASDIAI AKEILKVR+RLN IY KHTGQ I+ IE+ M+RDMFM
Sbjct: 149 PNARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFM 208

Query: 700 SPEEAKEFGLIDEVIEHRPTELVTDAV 780
            PEEA ++GLIDEVIEHRP  LV+DAV
Sbjct: 209 DPEEAHDWGLIDEVIEHRPVSLVSDAV 235


>ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
           gi|194700894|gb|ACF84531.1| unknown [Zea mays]
           gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease
           proteolytic subunit [Zea mays]
           gi|413918966|gb|AFW58898.1| ATP-dependent Clp protease
           proteolytic subunit isoform 1 [Zea mays]
           gi|413918967|gb|AFW58899.1| ATP-dependent Clp protease
           proteolytic subunit isoform 2 [Zea mays]
          Length = 260

 Score =  347 bits (891), Expect = 1e-93
 Identities = 173/205 (84%), Positives = 189/205 (92%)
 Frame = +1

Query: 166 RRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIDDSSASVVVAQLLFLESENPS 345
           RR YGL+PMVIEHTSRGERAYDIFSRLLKERI+CI+GPI D +AS+VVAQLLFLESENP+
Sbjct: 32  RREYGLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPA 91

Query: 346 KPINMYINSPGGVVTAGLAIYDTMQYIRSPVSTLCIGQAASMGSLLLTAGAKGERRALPN 525
           KP+++YINSPGGVVTAGLAIYDTMQYIRSPV+TLCIGQAASM SLLL AGA GERRALPN
Sbjct: 92  KPVHLYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPN 151

Query: 526 ARVMIHQPSGGASGQASDIAIQAKEILKVRERLNLIYTKHTGQKIEMIEKSMDRDMFMSP 705
           ARVMIHQPSGGASGQASDIAI AKEILKVR+RLN IY KHTGQ I+ IE+ M+RDMFM P
Sbjct: 152 ARVMIHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDP 211

Query: 706 EEAKEFGLIDEVIEHRPTELVTDAV 780
           EEA E+GLIDEVIEHRP  LV+DAV
Sbjct: 212 EEAHEWGLIDEVIEHRPVSLVSDAV 236