BLASTX nr result

ID: Cimicifuga21_contig00011962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00011962
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]   318   1e-84
ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g0264...   315   1e-83
ref|XP_002274147.1| PREDICTED: putative UPF0481 protein At3g0264...   313   3e-83
ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|2...   310   3e-82
ref|XP_002530454.1| conserved hypothetical protein [Ricinus comm...   306   5e-81

>emb|CAN62047.1| hypothetical protein VITISV_026044 [Vitis vinifera]
          Length = 551

 Score =  318 bits (815), Expect = 1e-84
 Identities = 160/277 (57%), Positives = 197/277 (71%), Gaps = 1/277 (0%)
 Frame = -2

Query: 830 SNLDEHRWVIQIRQSLEVELEEDEDIPVSIFNVPKTLMSSKPDVYIPQQVAIGPYHYWRQ 651
           S+ DE  WVIQIR++L+ ELE++ ++PV IFNVPKTLM++KPD Y+PQ+VA+GPYH WR 
Sbjct: 7   SSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRWRP 66

Query: 650 ELYEMERYKLAAAKRTQKRLESHKFQNLVDLLVKLEPRIRGSYHKYLHFNGETLAWMMAV 471
           ELYEMERYKLAAAKR QK L+S KF +LVD L K EPRIR  YHK+L FNGETLAWMMA+
Sbjct: 67  ELYEMERYKLAAAKRIQKHLQSLKFHSLVDQLTKNEPRIRACYHKFLEFNGETLAWMMAI 126

Query: 470 DLSFLLEYLQTFATKEGN-LTRLSSSMCHLVDYTGRKSAHNEILRDIVMLENQVPLFALR 294
           D SFLLE LQ +A KEG  LTR+SS M HLVDY G KSAHN ILRD+VMLENQ+PL  LR
Sbjct: 127 DASFLLEXLQVYAMKEGRMLTRVSSRMSHLVDYAGTKSAHNAILRDMVMLENQIPLLVLR 186

Query: 293 KFLEFEYTSLELADEALSSMLMGLCQELSPFNMVDFPCLFRIVDIVHLLDFLYQXXXXXX 114
           + LEF+++SL+ AD+ L SML G  ++L PF M++     ++ +  HLLDFLY       
Sbjct: 187 QVLEFQFSSLDQADDMLCSMLTGFGEDLCPFGMMENLPKIQVEEYAHLLDFLYHLIVPRS 246

Query: 113 XXXXXXXXXXESPRKPIERVESLSKYGYVKQAFDEIW 3
                             + ES   Y YV+Q F+EIW
Sbjct: 247 KEPSEIIEVENENESKEGKEESFGDYSYVQQLFEEIW 283


>ref|XP_002278924.2| PREDICTED: putative UPF0481 protein At3g02645-like [Vitis vinifera]
          Length = 551

 Score =  315 bits (807), Expect = 1e-83
 Identities = 159/277 (57%), Positives = 196/277 (70%), Gaps = 1/277 (0%)
 Frame = -2

Query: 830 SNLDEHRWVIQIRQSLEVELEEDEDIPVSIFNVPKTLMSSKPDVYIPQQVAIGPYHYWRQ 651
           S+ DE  WVIQIR++L+ ELE++ ++PV IFNVPKTLM++KPD Y+PQ+VA+GPYH WR 
Sbjct: 7   SSFDELEWVIQIRRTLDEELEDNSEVPVCIFNVPKTLMATKPDCYVPQEVALGPYHRWRP 66

Query: 650 ELYEMERYKLAAAKRTQKRLESHKFQNLVDLLVKLEPRIRGSYHKYLHFNGETLAWMMAV 471
           ELYEMERYKLAAAKR QK L+S KF +LVD L K EPRIR  YHK+L FNGETLAWMMA+
Sbjct: 67  ELYEMERYKLAAAKRIQKNLQSLKFHSLVDQLTKHEPRIRACYHKFLEFNGETLAWMMAI 126

Query: 470 DLSFLLEYLQTFATKEGN-LTRLSSSMCHLVDYTGRKSAHNEILRDIVMLENQVPLFALR 294
           D SFLLE+LQ +A KEG  LTR+SS M HLVDY G KSAHN ILRD+VMLENQ+PL  LR
Sbjct: 127 DASFLLEFLQVYAMKEGRMLTRVSSRMSHLVDYAGTKSAHNAILRDMVMLENQIPLLVLR 186

Query: 293 KFLEFEYTSLELADEALSSMLMGLCQELSPFNMVDFPCLFRIVDIVHLLDFLYQXXXXXX 114
           + LEF+++SL+ AD+ L SML G  ++L PF M++     ++    HLLDFLY       
Sbjct: 187 QVLEFQFSSLDQADDMLCSMLTGFGEDLCPFGMMENLPKIQVEKYAHLLDFLYHLIVPRS 246

Query: 113 XXXXXXXXXXESPRKPIERVESLSKYGYVKQAFDEIW 3
                             + ES     YV+Q F+EIW
Sbjct: 247 KEPSEIIEVENENESKEGKEESFGDSSYVQQLFEEIW 283


>ref|XP_002274147.1| PREDICTED: putative UPF0481 protein At3g02645-like [Vitis vinifera]
          Length = 547

 Score =  313 bits (803), Expect = 3e-83
 Identities = 157/276 (56%), Positives = 195/276 (70%), Gaps = 1/276 (0%)
 Frame = -2

Query: 827 NLDEHRWVIQIRQSLEVELEEDEDIPVSIFNVPKTLMSSKPDVYIPQQVAIGPYHYWRQE 648
           + DE RWVI+IR++L+ ELEED ++PV+I+NVPKTLM++KPD Y+PQ+VA+GPYH+WR E
Sbjct: 8   SFDELRWVIEIRRTLDEELEEDSEVPVNIYNVPKTLMATKPDCYVPQEVALGPYHHWRPE 67

Query: 647 LYEMERYKLAAAKRTQKRLESHKFQNLVDLLVKLEPRIRGSYHKYLHFNGETLAWMMAVD 468
           LYEMERYKLAAAKRTQK L+  KF++LVD L K EPRIR  YHK+L FNG+TLAWMMA+D
Sbjct: 68  LYEMERYKLAAAKRTQKHLQRVKFESLVDQLTKHEPRIRACYHKFLEFNGDTLAWMMAID 127

Query: 467 LSFLLEYLQTFATKEGN-LTRLSSSMCHLVDYTGRKSAHNEILRDIVMLENQVPLFALRK 291
            SFLLE+LQ +A K G  LTR+SS M HLVDY G KSAHN ILRD+VMLENQ+PLF LRK
Sbjct: 128 ASFLLEFLQVYAIKAGRVLTRVSSRMSHLVDYAGTKSAHNAILRDMVMLENQIPLFVLRK 187

Query: 290 FLEFEYTSLELADEALSSMLMGLCQELSPFNMVDFPCLFRIVDIVHLLDFLYQXXXXXXX 111
            LEF++ +L+ AD+ L SML G  ++L PF M+       + +  HLLDFLY        
Sbjct: 188 VLEFQFPTLDQADDMLCSMLAGFGEDLCPFGMMKDLPQIHVEEQAHLLDFLYHLIVPRSK 247

Query: 110 XXXXXXXXXESPRKPIERVESLSKYGYVKQAFDEIW 3
                            + ES     YV+Q F  IW
Sbjct: 248 EPSEIIEVENEDESKEGKEESFGDSNYVQQLFQIIW 283


>ref|XP_002313925.1| predicted protein [Populus trichocarpa] gi|222850333|gb|EEE87880.1|
           predicted protein [Populus trichocarpa]
          Length = 559

 Score =  310 bits (795), Expect = 3e-82
 Identities = 162/287 (56%), Positives = 203/287 (70%), Gaps = 5/287 (1%)
 Frame = -2

Query: 848 ASITPMSNL--DEHRWVIQIRQSLEVELEEDEDIPVSIFNVPKTLMSSKPDVYIPQQVAI 675
           ++++  SNL  DEHRW+I IR++LE ELE D +IPV IFNVPK LM+S PD Y PQ+VAI
Sbjct: 6   SNMSSNSNLSFDEHRWIINIRRTLEEELENDAEIPVCIFNVPKALMTSDPDSYTPQEVAI 65

Query: 674 GPYHYWRQELYEMERYKLAAAKRTQKRLESHKFQNLVDLLVKLEPRIRGSYHKYLHFNGE 495
           GPYH+WR ELYEMERYKLAAAKRTQK+++S KFQ++VD L KLE +IR  YHK+L F+ E
Sbjct: 66  GPYHHWRPELYEMERYKLAAAKRTQKKIQSLKFQHIVDHLSKLELKIRACYHKFLDFSNE 125

Query: 494 TLAWMMAVDLSFLLEYLQTFATKEG-NLTRLSS-SMCHLVDYTGRKSAHNEILRDIVMLE 321
           TL WMMA+D SFLLE+L+ +A KEG  +TR+SS SM HLVDY GRKSAHN ILRD+ MLE
Sbjct: 126 TLTWMMAIDASFLLEFLEIYAIKEGIAITRVSSRSMSHLVDYAGRKSAHNAILRDVAMLE 185

Query: 320 NQVPLFALRKFLEFEYTSLELADEALSSMLMGLCQELSPFNMVDFPCLFRIVDIVHLLDF 141
           NQ+PLF LRK LE + +SLELAD+ L SML+G C+ELSPF ++       I    HLLD+
Sbjct: 186 NQIPLFVLRKILEVQLSSLELADDMLCSMLLGFCKELSPFKLMQDIPKIHIPQCAHLLDY 245

Query: 140 LYQXXXXXXXXXXXXXXXXESPRKPIE-RVESLSKYGYVKQAFDEIW 3
           LY                 +   + +E R  S     +++  F EIW
Sbjct: 246 LYDMIVPKVEAPPEIISEADDQPEAMEGRYNSSGNSSHIRDLFSEIW 292


>ref|XP_002530454.1| conserved hypothetical protein [Ricinus communis]
           gi|223529999|gb|EEF31924.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 531

 Score =  306 bits (784), Expect = 5e-81
 Identities = 149/236 (63%), Positives = 185/236 (78%), Gaps = 1/236 (0%)
 Frame = -2

Query: 836 PMSNLDEHRWVIQIRQSLEVELEEDEDIPVSIFNVPKTLMSSKPDVYIPQQVAIGPYHYW 657
           P  N DEH W+I IR+++E ELE + ++PVSIF+VPK LM++ PD Y PQQVAIGPYH+W
Sbjct: 12  PNPNFDEHLWIIHIRRTIEEELENESEVPVSIFSVPKILMTADPDSYTPQQVAIGPYHHW 71

Query: 656 RQELYEMERYKLAAAKRTQKRLESHKFQNLVDLLVKLEPRIRGSYHKYLHFNGETLAWMM 477
           R E+YEMERYKLAAAKRTQK+L++ KFQ +VD L +LEP+IR SYH++L  + ETLAWMM
Sbjct: 72  RPEIYEMERYKLAAAKRTQKQLQNVKFQYIVDHLTELEPKIRASYHRFLDLSNETLAWMM 131

Query: 476 AVDLSFLLEYLQTFATKEG-NLTRLSSSMCHLVDYTGRKSAHNEILRDIVMLENQVPLFA 300
           A+D SFLLE+LQ +A KEG ++TR+S+ M HLVDY G+KSAHN ILRD+VMLENQ+PLF 
Sbjct: 132 AIDASFLLEFLQIYAIKEGMSITRVSTRMSHLVDYAGKKSAHNAILRDMVMLENQIPLFV 191

Query: 299 LRKFLEFEYTSLELADEALSSMLMGLCQELSPFNMVDFPCLFRIVDIVHLLDFLYQ 132
           LRK LE ++ SLELADE L SML G  +ELSPF M        I    HLLD+LY+
Sbjct: 192 LRKILEVQFLSLELADEMLLSMLSGFSKELSPFKMTKEARKISISQCAHLLDYLYE 247


Top