BLASTX nr result
ID: Cimicifuga21_contig00011960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00011960
(2036 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002331320.1| f-box family protein [Populus trichocarpa] g... 119 3e-24
ref|NP_176127.1| F-box protein [Arabidopsis thaliana] gi|3740953... 118 5e-24
ref|XP_002331319.1| f-box family protein [Populus trichocarpa] g... 118 7e-24
gb|AAF82256.1|AC008051_7 Contains a F-box PF|00646 domain [Arabi... 113 2e-22
ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|2... 113 2e-22
>ref|XP_002331320.1| f-box family protein [Populus trichocarpa]
gi|222873903|gb|EEF11034.1| f-box family protein [Populus
trichocarpa]
Length = 453
Score = 119 bits (298), Expect = 3e-24
Identities = 93/349 (26%), Positives = 167/349 (47%), Gaps = 23/349 (6%)
Frame = -1
Query: 1670 NMSDGVDRIGALPDSLIHHIFSFLDMKEVVQTSILSNRWRHLWASSPYLDFRFDRFD--W 1497
++++ DRI LP+ L+HHI SF+D +VVQT +LS RW ++W S PYLDF F+ F
Sbjct: 29 SLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLI 88
Query: 1496 NDYHHGVPGRNFVDFVDRVLILRDSLSIHKFTIYCSGQLQTIRVSTWLIAALKRRVQELD 1317
N ++ NF DF+ VL+ R+++ K ++ Q V + + A+K V+E+
Sbjct: 89 NSDYYDDDMNNFTDFIYHVLVRRNNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEIS 148
Query: 1316 L-TLFVDQPIEFPKNLFTSD-VKVLRLSCYGGEMVNQMPYSMCSANNIESLDLEFVKLPD 1143
+ T D PI P+ F + ++ L+L GG +P S+ ++++L L +
Sbjct: 149 INTAHWDVPIVLPRCFFDCESLRSLKLKVDGG---LALPKSL-GLQSLKTLHLGGAQ--- 201
Query: 1142 GDSNGEXXXXXXXXXXXXLSGCDISHLRVLTISCLRLKSLGLSNGYHDR-DHFCNINICC 966
+ +G+ + ++ + I L LKSL + N ++R C + +
Sbjct: 202 -NFDGKIFSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVA 260
Query: 965 PNLTSLMLCCDTHWDCSLESLTALTSANIEIFGYIETEKKVYF----------------- 837
P LTS +T S +LT+L N+ + Y + ++
Sbjct: 261 PKLTSFKFDGNTPLFWSDVNLTSLDDVNVVLQRYHHSHNYPFYVVEDEYISEEDETEQGL 320
Query: 836 -QSLINVLKGICNARVLNLSSHVPKAISDSPEILEMLPTLFHKLRDIRI 693
+LI +L C+A+ L LS ++ + +S+ P L+ P+ F L+ +++
Sbjct: 321 GLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKL 369
>ref|NP_176127.1| F-box protein [Arabidopsis thaliana]
gi|374095392|sp|Q9LQC1.2|FB65_ARATH RecName:
Full=Putative F-box protein At1g58310
gi|332195413|gb|AEE33534.1| F-box protein [Arabidopsis
thaliana]
Length = 505
Score = 118 bits (296), Expect = 5e-24
Identities = 103/387 (26%), Positives = 171/387 (44%), Gaps = 40/387 (10%)
Frame = -1
Query: 1652 DRIGALPDSLIHHIFSFLDMKEVVQTSILSNRWRHLWASSPYLDF----------RFDRF 1503
D I LPDSL+ HI SFL+ KE TS+L+ +WR+L+AS P LDF R
Sbjct: 8 DIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKRNPAV 67
Query: 1502 DWNDYHHGVPGR------NFVDFVDRVLILRDSLSIHKFTIYCSGQLQTIRVSTWLIAAL 1341
DY + R +F+DFVD+VL L+D+ +HKF++ + +R+ W++ L
Sbjct: 68 SGEDYLKMINERSDQLSTSFMDFVDQVLRLQDNSPLHKFSLKIRDCVDIVRIICWILKVL 127
Query: 1340 KRRVQELDLTLFVDQPIEFPKNLFTSDVKV-LRLSCYGGEMVNQMPYSMCSANNIESLDL 1164
+R V +L+L + + P +F S+ V L+LS G ++ + + + +
Sbjct: 128 ERGVSDLELDMHLKWKSSLPSKIFLSETLVRLKLSVERGPFIDVEDVHLPKLKTLHIVSV 187
Query: 1163 EFVKLPDGDSNGEXXXXXXXXXXXXLSGCDI-SHLRV----------LTISCLRLKSLGL 1017
+F K G LSGC I L + +++S LK L
Sbjct: 188 KFEKHGIG-------------LNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLTF 234
Query: 1016 SNGYHDRDHFCNINICCPNLTSLMLCCDTHWDCSLESLTALTSANIEIFGYIETEKKVYF 837
++ +++ PNL LM + S + +L A+I + + ++ F
Sbjct: 235 CGEVMQDENPISVSFNTPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSEDQVEQTRF 294
Query: 836 Q------------SLINVLKGICNARVLNLSSHVPKAISDSPEILEMLPTLFHKLRDIRI 693
+ ++ GICN ++L LS + + ++ E + + L H I
Sbjct: 295 SDSEGNMEGCMVANATELIMGICNVKILYLSVYTLEVLTYCCEAIPLFNNLTH--LTIES 352
Query: 692 GVWVGTRVIANLLKTLPRLETLVLEGV 612
VG ++ LLK P LETLV +G+
Sbjct: 353 NSEVGWESVSGLLKNSPNLETLVFKGL 379
>ref|XP_002331319.1| f-box family protein [Populus trichocarpa]
gi|222873902|gb|EEF11033.1| f-box family protein [Populus
trichocarpa]
Length = 453
Score = 118 bits (295), Expect = 7e-24
Identities = 93/349 (26%), Positives = 165/349 (47%), Gaps = 23/349 (6%)
Frame = -1
Query: 1670 NMSDGVDRIGALPDSLIHHIFSFLDMKEVVQTSILSNRWRHLWASSPYLDFRFDRFD--W 1497
++++ DRI LP+ L+HHI SF+D +VVQT +LS RW ++W S PYLDF F+ F
Sbjct: 29 SLNNNEDRISTLPNVLLHHILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLI 88
Query: 1496 NDYHHGVPGRNFVDFVDRVLILRDSLSIHKFTIYCSGQLQTIRVSTWLIAALKRRVQELD 1317
N ++ NF DF+ VL+ R +L K ++ + V + + A+K V+E+
Sbjct: 89 NSDYYDDEVNNFTDFIYHVLVRRHNLKAVKISLDILRDTRCSLVESLIYYAVKHHVEEIS 148
Query: 1316 L-TLFVDQPIEFPKNLFTSD-VKVLRLSCYGGEMVNQMPYSMCSANNIESLDLEFVKLPD 1143
+ T D PI P+ F + ++ L+L GG +P S+ ++++L L +
Sbjct: 149 VNTAHWDMPIVLPRCFFDCESLRSLKLKVDGG---IALPKSL-GLQSLKTLHLGGAR--- 201
Query: 1142 GDSNGEXXXXXXXXXXXXLSGCDISHLRVLTISCLRLKSLGLSNGYHDR-DHFCNINICC 966
+ +G+ + ++ + I L LKSL + N + R C + +
Sbjct: 202 -NFDGKIFSTCPNLENLKIEDIYLNTIENFNIHALNLKSLEILNWRYGRIMRGCKVMLFA 260
Query: 965 PNLTSLMLCCDTHWDCSLESLTALTSANIEIFGYIETEKKVYF----------------- 837
P LTS +T S +LT+L N+ + Y + ++
Sbjct: 261 PKLTSFKFYGNTPLFWSEVNLTSLDDVNVVLQRYQHSHNYPFYVVEDEYISEEDETEQGL 320
Query: 836 -QSLINVLKGICNARVLNLSSHVPKAISDSPEILEMLPTLFHKLRDIRI 693
+LI +L C+A+ L LS ++ + +S+ P L+ P+ F L+ +++
Sbjct: 321 GLNLIKMLHQFCSAKSLTLSMNIIEILSEVPAALDKHPSPFSNLKYLKL 369
>gb|AAF82256.1|AC008051_7 Contains a F-box PF|00646 domain [Arabidopsis thaliana]
Length = 482
Score = 113 bits (283), Expect = 2e-22
Identities = 98/371 (26%), Positives = 165/371 (44%), Gaps = 24/371 (6%)
Frame = -1
Query: 1652 DRIGALPDSLIHHIFSFLDMKEVVQTSILSNRWRHLWASSPYLDFRFDRFDWNDYHHGVP 1473
D I LPDSL+ HI SFL+ KE TS+L+ +WR+L+AS P LDF +D H
Sbjct: 8 DIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDF-------DDSVHLRL 60
Query: 1472 GRNFVDFVDRVLILRDSLSIHKFTIYCSGQLQTIRVSTWLIAALKRRVQELDLTLFVDQP 1293
G+ D+VL L+D+ +HKF++ + +R+ W++ L+R V +L+L + +
Sbjct: 61 GKRNPAVSDQVLRLQDNSPLHKFSLKIRDCVDIVRIICWILKVLERGVSDLELDMHLKWK 120
Query: 1292 IEFPKNLFTSDVKV-LRLSCYGGEMVNQMPYSMCSANNIESLDLEFVKLPDGDSNGEXXX 1116
P +F S+ V L+LS G ++ + + + ++F K G
Sbjct: 121 SSLPSKIFLSETLVRLKLSVERGPFIDVEDVHLPKLKTLHIVSVKFEKHGIG-------- 172
Query: 1115 XXXXXXXXXLSGCDI-SHLRV----------LTISCLRLKSLGLSNGYHDRDHFCNINIC 969
LSGC I L + +++S LK L ++ +++
Sbjct: 173 -----LNKLLSGCHILEELNLEYISWCLWDFVSVSLTTLKRLTFCGEVMQDENPISVSFN 227
Query: 968 CPNLTSLMLCCDTHWDCSLESLTALTSANIEIFGYIETEKKVYFQ------------SLI 825
PNL LM + S + +L A+I + + ++ F +
Sbjct: 228 TPNLVYLMFTDAIADEYSTVNFDSLVEAHINLQMSEDQVEQTRFSDSEGNMEGCMVANAT 287
Query: 824 NVLKGICNARVLNLSSHVPKAISDSPEILEMLPTLFHKLRDIRIGVWVGTRVIANLLKTL 645
++ GICN ++L LS + + ++ E + + L H I VG ++ LLK
Sbjct: 288 ELIMGICNVKILYLSVYTLEVLTYCCEAIPLFNNLTH--LTIESNSEVGWESVSGLLKNS 345
Query: 644 PRLETLVLEGV 612
P LETLV +G+
Sbjct: 346 PNLETLVFKGL 356
>ref|XP_002331322.1| predicted protein [Populus trichocarpa] gi|222873905|gb|EEF11036.1|
predicted protein [Populus trichocarpa]
Length = 335
Score = 113 bits (283), Expect = 2e-22
Identities = 88/323 (27%), Positives = 152/323 (47%), Gaps = 23/323 (7%)
Frame = -1
Query: 1670 NMSDGVDRIGALPDSLIHHIFSFLDMKEVVQTSILSNRWRHLWASSPYLDFRFDRFD--W 1497
++++ DRI LP+ L+HHI SFLD +VVQT +LS RW ++W S PYLDF F+ F
Sbjct: 10 SLNNNEDRISTLPNVLLHHILSFLDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLI 69
Query: 1496 NDYHHGVPGRNFVDFVDRVLILRDSLSIHKFTIYCSGQLQTIRVSTWLIAALKRRVQELD 1317
+ Y++ NF DF+ VL+ R+++ K ++ Q V + + A+K V+E+
Sbjct: 70 SSYYYDDDMNNFTDFISHVLVRRNNVKAFKLSLDTRRDCQYSVVESLIYYAVKHHVEEIS 129
Query: 1316 L-TLFVDQPIEFPKNLFTSD-VKVLRLSCYGGEMVNQMPYSMCSANNIESLDLEFVKLPD 1143
+ T D PI P+ F + ++ L+L GG +P S+ ++++L L +
Sbjct: 130 INTAHWDVPIVLPRCFFDCESLRSLKLKVDGG---LALPKSL-GLQSLKTLHLGGAQ--- 182
Query: 1142 GDSNGEXXXXXXXXXXXXLSGCDISHLRVLTISCLRLKSLGLSNGYHDR-DHFCNINICC 966
+ +G+ + ++ + I L LKSL + N ++R C + +
Sbjct: 183 -NFDGKIFSSCPNLENLTIEDICLNVIENFNIHALSLKSLEILNWRYNRIKQGCKVMLVA 241
Query: 965 PNLTSLMLCCDTHWDCSLESLTALTSANIEIFGYIETEKKVYF----------------- 837
P LTS +T S +LT+L N+ + Y ++
Sbjct: 242 PKLTSFKFYGNTPLFWSEVNLTSLDDVNVVLQRYYHNHNYPFYVVEDEYISEEEETEQGL 301
Query: 836 -QSLINVLKGICNARVLNLSSHV 771
+LI +L C+A+ L LS ++
Sbjct: 302 GLNLIKMLHQFCSAKSLTLSMNI 324